RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 PSME1Q06323 249 aa5.66□□□□□ -1.5
RPN1-205ENST00000490166 MTMR2Q13614 643 aa5.66□□□□□ -1.5
RPN1-205ENST00000490166 CFAP70Q5T0N1 1121 aa5.66□□□□□ -1.5
RPN1-205ENST00000490166 MYSM1Q5VVJ2 828 aa5.66□□□□□ -1.5
RPN1-205ENST00000490166 RSBN1LQ6PCB5 846 aaPredicted RBP5.66□□□□□ -1.5
RPN1-205ENST00000490166 RIC3Q7Z5B4 369 aa5.66□□□□□ -1.5
RPN1-205ENST00000490166 NGDNQ8NEJ9 315 aaKnown RBP5.66□□□□□ -1.5
RPN1-205ENST00000490166 PRDM9Q9NQV7 894 aa5.66□□□□□ -1.5
RPN1-205ENST00000490166 FCF1Q9Y324 198 aaKnown RBP5.66□□□□□ -1.5
RPN1-205ENST00000490166 PLEKHH1Q9ULM0 1364 aa5.66□□□□□ -1.5
RPN1-205ENST00000490166 SHPRHQ149N8 1683 aa5.66□□□□□ -1.5
RPN1-205ENST00000490166 RPIAP49247 311 aa5.65□□□□□ -1.5
RPN1-205ENST00000490166 RBM6P78332 1123 aaKnown RBP5.65□□□□□ -1.5
RPN1-205ENST00000490166 NEUROD1Q13562 356 aa5.65□□□□□ -1.5
RPN1-205ENST00000490166 LAPTM4AQ15012 233 aa5.65□□□□□ -1.5
RPN1-205ENST00000490166 PRPF38BQ5VTL8 546 aaKnown RBP5.65□□□□□ -1.5
RPN1-205ENST00000490166 SPRYD7Q5W111 196 aa5.65□□□□□ -1.5
RPN1-205ENST00000490166 CABLES1Q8TDN4 633 aa5.65□□□□□ -1.5
RPN1-205ENST00000490166 SYMPKQ92797 1274 aaKnown RBP5.65□□□□□ -1.5
RPN1-205ENST00000490166 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.65□□□□□ -1.5
RPN1-205ENST00000490166 TRPC5Q9UL62 973 aaPredicted RBP5.65□□□□□ -1.5
RPN1-205ENST00000490166 TIMELESSQ9UNS1 1208 aa5.65□□□□□ -1.5
RPN1-205ENST00000490166 GPRASP1Q5JY77 1395 aa5.65□□□□□ -1.51
RPN1-205ENST00000490166 ATAD2Q6PL18 1390 aa5.65□□□□□ -1.51
RPN1-205ENST00000490166 RGS12O14924 1447 aa5.65□□□□□ -1.51
RPN1-205ENST00000490166 YTHDC2Q9H6S0 1430 aaKnown RBP5.65□□□□□ -1.51
RPN1-205ENST00000490166 CDC42BPGQ6DT37 1551 aa5.64□□□□□ -1.51
RPN1-205ENST00000490166 ZBTB24O43167 697 aaPredicted RBP5.64□□□□□ -1.51
RPN1-205ENST00000490166 CD2BP2O95400 341 aaKnown RBP5.64□□□□□ -1.51
RPN1-205ENST00000490166 JUNDP17535 347 aa5.64□□□□□ -1.51
RPN1-205ENST00000490166 CLK2P49760 499 aaKnown RBP5.64□□□□□ -1.51
RPN1-205ENST00000490166 SRPK2P78362 688 aaKnown RBP5.64□□□□□ -1.51
RPN1-205ENST00000490166 NUTM2GQ5VZR2 741 aa5.64□□□□□ -1.51
RPN1-205ENST00000490166 LIAT1Q6ZQX7 453 aa5.64□□□□□ -1.51
RPN1-205ENST00000490166 KRT28Q7Z3Y7 464 aa5.64□□□□□ -1.51
RPN1-205ENST00000490166 ZNF598Q86UK7 904 aaKnown RBP5.64□□□□□ -1.51
RPN1-205ENST00000490166 ZBTB3Q9H5J0 574 aa5.64□□□□□ -1.51
RPN1-205ENST00000490166 NHSL1Q5SYE7 1610 aa5.63□□□□□ -1.51
RPN1-205ENST00000490166 PPLO60437 1756 aa5.63□□□□□ -1.51
RPN1-205ENST00000490166 PLA2G2CQ5R387 149 aa5.63□□□□□ -1.51
RPN1-205ENST00000490166 DESI1Q6ICB0 168 aa5.63□□□□□ -1.51
RPN1-205ENST00000490166 EMID1Q96A84 441 aaPredicted RBP5.63□□□□□ -1.51
RPN1-205ENST00000490166 STRN4Q9NRL3 753 aa5.63□□□□□ -1.51
RPN1-205ENST00000490166 PCDHB15Q9Y5E8 787 aa5.63□□□□□ -1.51
RPN1-205ENST00000490166 EIF3AQ14152 1382 aaKnown RBP5.63□□□□□ -1.51
RPN1-205ENST00000490166 PIK3C2GO75747 1445 aa5.63□□□□□ -1.51
RPN1-205ENST00000490166 HRCP23327 699 aa5.62□□□□□ -1.51
RPN1-205ENST00000490166 PRR7Q8TB68 274 aa5.62□□□□□ -1.51
RPN1-205ENST00000490166 USP35Q9P2H5 1018 aa5.62□□□□□ -1.51
RPN1-205ENST00000490166 TNS3Q68CZ2 1445 aa5.62□□□□□ -1.51
RPN1-205ENST00000490166 LAMC1P11047 1609 aa5.62□□□□□ -1.51
RPN1-205ENST00000490166 NRG2O14511 850 aaPredicted RBP5.61□□□□□ -1.51
RPN1-205ENST00000490166 GFRA3O60609 400 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 MYOM2P54296 1465 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 KIF1AQ12756 1690 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 FLIIQ13045 1269 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 CSPP1Q1MSJ5 1256 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 ZNF697Q5TEC3 545 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 PPP2R2DQ66LE6 453 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 CCDC24Q8N4L8 307 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 PROCA1Q8NCQ7 364 aaPredicted RBP5.61□□□□□ -1.51
RPN1-205ENST00000490166 NUDT12Q9BQG2 462 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 PRDM11Q9NQV5 511 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 POLR3EQ9NVU0 708 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 LIMD1Q9UGP4 676 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 ACIN1Q9UKV3 1341 aaKnown RBP5.61□□□□□ -1.51
RPN1-205ENST00000490166 PDZRN3Q9UPQ7 1066 aa5.61□□□□□ -1.51
RPN1-205ENST00000490166 SPATA31E1Q6ZUB1 1445 aa5.6□□□□□ -1.51
RPN1-205ENST00000490166 ARHGEF10O15013 1369 aa5.6□□□□□ -1.51
RPN1-205ENST00000490166 SOS2Q07890 1332 aaPredicted RBP5.6□□□□□ -1.51
RPN1-205ENST00000490166 EVA1CP58658 441 aa5.6□□□□□ -1.51
RPN1-205ENST00000490166 PRR20EP86478 221 aa5.6□□□□□ -1.51
RPN1-205ENST00000490166 PRR20CP86479 221 aa5.6□□□□□ -1.51
RPN1-205ENST00000490166 PRR20DP86480 221 aa5.6□□□□□ -1.51
RPN1-205ENST00000490166 PRR20BP86481 221 aa5.6□□□□□ -1.51
RPN1-205ENST00000490166 PRR20AP86496 221 aa5.6□□□□□ -1.51
RPN1-205ENST00000490166 PTPRNQ16849 979 aa5.6□□□□□ -1.51
RPN1-205ENST00000490166 IFT172Q9UG01 1749 aa5.6□□□□□ -1.51
RPN1-205ENST00000490166 LILRB3O75022 631 aa5.59□□□□□ -1.51
RPN1-205ENST00000490166 CCNYL3P0C7X3 344 aa5.59□□□□□ -1.51
RPN1-205ENST00000490166 CSB-PGBD3P0DP91 1061 aa5.59□□□□□ -1.51
RPN1-205ENST00000490166 ZC3H6P61129 1189 aaKnown RBP5.59□□□□□ -1.51
RPN1-205ENST00000490166 CHRNA2Q15822 529 aa5.59□□□□□ -1.51
RPN1-205ENST00000490166 EVA1BQ9NVM1 165 aa5.59□□□□□ -1.51
RPN1-205ENST00000490166 BTG4Q9NY30 223 aa5.59□□□□□ -1.51
RPN1-205ENST00000490166 PXDNQ92626 1479 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 ABCC11Q96J66 1382 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 SPATA31A3Q5VYP0 1347 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 KNDC1Q76NI1 1749 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 FMN2Q9NZ56 1722 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 CFAP99D6REC4 459 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 TRIM32Q13049 653 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 QPCTQ16769 361 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 FAM182BQ5T319 152 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 LYPD8Q6UX82 237 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 UNC5CLQ8IV45 518 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 SEPT12Q8IYM1 358 aa5.58□□□□□ -1.52
RPN1-205ENST00000490166 GJD4Q96KN9 370 aaPredicted RBP5.58□□□□□ -1.52
RPN1-205ENST00000490166 C14orf93Q9H972 538 aaKnown RBP5.58□□□□□ -1.52
RPN1-205ENST00000490166 USP32Q8NFA0 1604 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms