RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 GIGYF1O75420 1035 aaPredicted RBP4.37□□□□□ -1.71
UBXN4-208ENST00000490163 USP4Q13107 963 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 DMRTA1Q5VZB9 504 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 NOC4LQ9BVI4 516 aaKnown RBP4.37□□□□□ -1.71
UBXN4-208ENST00000490163 ZNF211Q13398 564 aaPredicted RBP4.37□□□□□ -1.71
UBXN4-208ENST00000490163 GLYCTKQ8IVS8 523 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 CACNA2D2Q9NY47 1150 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 RAB11FIP3O75154 756 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 AMPD3Q01432 767 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 NFE2L2Q16236 605 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 KMT5BQ4FZB7 885 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 SMC5Q8IY18 1101 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 GLIS3Q8NEA6 775 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 STRIP2Q9ULQ0 834 aa4.37□□□□□ -1.71
UBXN4-208ENST00000490163 PARNO95453 639 aaKnown RBP4.36□□□□□ -1.71
UBXN4-208ENST00000490163 MZF1P28698 734 aaPredicted RBP4.36□□□□□ -1.71
UBXN4-208ENST00000490163 ZNF76P36508 570 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 PDE3BQ13370 1112 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 ARSHQ5FYA8 562 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 DEPDC4Q8N2C3 294 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 CWC22Q9HCG8 908 aaKnown RBP4.36□□□□□ -1.71
UBXN4-208ENST00000490163 LRFN2Q9ULH4 789 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 ZCCHC6Q5VYS8 1495 aaKnown RBP4.36□□□□□ -1.71
UBXN4-208ENST00000490163 EML1O00423 815 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 INHAP05111 366 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 C8orf48Q96LL4 319 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 CAMKK2Q96RR4 588 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 DUSP9Q99956 384 aaKnown RBP4.36□□□□□ -1.71
UBXN4-208ENST00000490163 FHDC1Q9C0D6 1143 aaPredicted RBP4.36□□□□□ -1.71
UBXN4-208ENST00000490163 SRCIN1Q9C0H9 1055 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 PCDH12Q9NPG4 1184 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 SCHIP1Q9P0W5 487 aaPredicted RBP4.36□□□□□ -1.71
UBXN4-208ENST00000490163 STIM2Q9P246 746 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 SORBS3O60504 671 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 SEC24BO95487 1268 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 EGFRP00533 1210 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 LDHBP07195 334 aaKnown RBP4.36□□□□□ -1.71
UBXN4-208ENST00000490163 ATP2B1P20020 1258 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 PRPF40BQ6NWY9 871 aaKnown RBP4.36□□□□□ -1.71
UBXN4-208ENST00000490163 PPP1R18Q6NYC8 613 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 C16orf46Q6P387 395 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 SCUBE3Q8IX30 993 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 PRIMPOLQ96LW4 560 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 OSBPL3Q9H4L5 887 aa4.36□□□□□ -1.71
UBXN4-208ENST00000490163 SAMD7Q7Z3H4 446 aa4.35□□□□□ -1.71
UBXN4-208ENST00000490163 SAP130Q9H0E3 1048 aa4.35□□□□□ -1.71
UBXN4-208ENST00000490163 CNTN3Q9P232 1028 aa4.35□□□□□ -1.71
UBXN4-208ENST00000490163 CCDC194A0A1B0GVG4 234 aa4.35□□□□□ -1.71
UBXN4-208ENST00000490163 RFPL3O75679 317 aa4.35□□□□□ -1.71
UBXN4-208ENST00000490163 TSNAXIP1Q2TAA8 658 aa4.35□□□□□ -1.71
UBXN4-208ENST00000490163 SCARA3Q6AZY7 606 aa4.35□□□□□ -1.71
UBXN4-208ENST00000490163 NT5C1AQ9BXI3 368 aa4.35□□□□□ -1.71
UBXN4-208ENST00000490163 SOWAHBA6NEL2 793 aa4.34□□□□□ -1.71
UBXN4-208ENST00000490163 RIMBP2O15034 1052 aa4.34□□□□□ -1.71
UBXN4-208ENST00000490163 LILRA1O75019 489 aa4.34□□□□□ -1.71
UBXN4-208ENST00000490163 PDGFAP04085 211 aa4.34□□□□□ -1.71
UBXN4-208ENST00000490163 ERFEQ4G0M1 354 aa4.34□□□□□ -1.71
UBXN4-208ENST00000490163 ZNF687Q8N1G0 1237 aa4.34□□□□□ -1.71
UBXN4-208ENST00000490163 RHOVQ96L33 236 aa4.34□□□□□ -1.71
UBXN4-208ENST00000490163 IRF2BPLQ9H1B7 796 aa4.34□□□□□ -1.71
UBXN4-208ENST00000490163 A0A1W2PRU2 124 aa4.34□□□□□ -1.71
UBXN4-208ENST00000490163 ZBTB24O43167 697 aaPredicted RBP4.34□□□□□ -1.71
UBXN4-208ENST00000490163 EIF1AXP47813 144 aaKnown RBP4.34□□□□□ -1.71
UBXN4-208ENST00000490163 ZCRB1Q8TBF4 217 aaKnown RBP4.34□□□□□ -1.71
UBXN4-208ENST00000490163 DHX38Q92620 1227 aaKnown RBP4.34□□□□□ -1.71
UBXN4-208ENST00000490163 ATAD2Q6PL18 1390 aa4.34□□□□□ -1.71
UBXN4-208ENST00000490163 BRD2P25440 801 aaKnown RBP4.34□□□□□ -1.72
UBXN4-208ENST00000490163 USP5P45974 858 aa4.34□□□□□ -1.72
UBXN4-208ENST00000490163 ARID5AQ03989 594 aa4.34□□□□□ -1.72
UBXN4-208ENST00000490163 KIAA0319Q5VV43 1072 aa4.34□□□□□ -1.72
UBXN4-208ENST00000490163 MICAL1Q8TDZ2 1067 aa4.34□□□□□ -1.72
UBXN4-208ENST00000490163 UNC93B1Q9H1C4 597 aa4.34□□□□□ -1.72
UBXN4-208ENST00000490163 FAN1Q9Y2M0 1017 aa4.34□□□□□ -1.72
UBXN4-208ENST00000490163 NR1I2O75469 434 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 GNRH1P01148 92 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 NDUFB5O43674 189 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 APLP1P51693 650 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 SYNPOQ8N3V7 929 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 ABTB2Q8N961 1025 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 TRPM4Q8TD43 1214 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 ST18O60284 1047 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 MPSTP25325 297 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 CTC1Q2NKJ3 1217 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 IER5Q5VY09 327 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 SLITRK4Q8IW52 837 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 TPCN2Q8NHX9 752 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 TANGO6Q9C0B7 1094 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 CCDC87Q9NVE4 849 aa4.33□□□□□ -1.72
UBXN4-208ENST00000490163 UNC13AQ9UPW8 1703 aa4.32□□□□□ -1.72
UBXN4-208ENST00000490163 HLTFQ14527 1009 aaKnown RBP eCLIP4.32□□□□□ -1.723e-8■■□□□ 12.6
UBXN4-208ENST00000490163 KDF1Q8NAX2 398 aaPredicted RBP4.32□□□□□ -1.72
UBXN4-208ENST00000490163 TMEM87AQ8NBN3 555 aa4.32□□□□□ -1.72
UBXN4-208ENST00000490163 ARHGAP9Q9BRR9 750 aa4.32□□□□□ -1.72
UBXN4-208ENST00000490163 WWC3Q9ULE0 1092 aa4.32□□□□□ -1.72
UBXN4-208ENST00000490163 SMAPO00193 183 aa4.32□□□□□ -1.72
UBXN4-208ENST00000490163 CCDC84Q86UT8 332 aaPredicted RBP4.32□□□□□ -1.72
UBXN4-208ENST00000490163 C3orf58Q8NDZ4 430 aa4.32□□□□□ -1.72
UBXN4-208ENST00000490163 ZDHHC1Q8WTX9 485 aa4.32□□□□□ -1.72
UBXN4-208ENST00000490163 TRIM52Q96A61 297 aa4.32□□□□□ -1.72
UBXN4-208ENST00000490163 ROBO2Q9HCK4 1378 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms