RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 MCOLN1Q9GZU1 580 aa20.66■□□□□ 0.9
SDHAF3-204ENST00000489852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.66■□□□□ 0.9
SDHAF3-204ENST00000489852 FLT4P35916 1363 aa20.66■□□□□ 0.9
SDHAF3-204ENST00000489852 DLEC1Q9Y238 1755 aa20.66■□□□□ 0.9
SDHAF3-204ENST00000489852 C2CD5Q86YS7 1000 aa20.65■□□□□ 0.9
SDHAF3-204ENST00000489852 TAF1DQ9H5J8 278 aaPredicted RBP20.65■□□□□ 0.9
SDHAF3-204ENST00000489852 ABT1Q9ULW3 272 aaKnown RBP20.65■□□□□ 0.9
SDHAF3-204ENST00000489852 CRKLP46109 303 aaKnown RBP20.64■□□□□ 0.89
SDHAF3-204ENST00000489852 H0YIN7 160 aa20.63■□□□□ 0.89
SDHAF3-204ENST00000489852 EAPPQ56P03 285 aaPredicted RBP20.63■□□□□ 0.89
SDHAF3-204ENST00000489852 CLEC11AQ9Y240 323 aa20.63■□□□□ 0.89
SDHAF3-204ENST00000489852 ZPR1O75312 459 aa20.62■□□□□ 0.89
SDHAF3-204ENST00000489852 PUS7Q96PZ0 661 aaKnown RBP20.62■□□□□ 0.89
SDHAF3-204ENST00000489852 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
SDHAF3-204ENST00000489852 TSKSQ9UJT2 592 aa20.62■□□□□ 0.89
SDHAF3-204ENST00000489852 ZNF219Q9P2Y4 722 aaPredicted RBP20.61■□□□□ 0.89
SDHAF3-204ENST00000489852 SCN4AP35499 1836 aa20.61■□□□□ 0.89
SDHAF3-204ENST00000489852 AFDNP55196 1824 aaKnown RBP20.61■□□□□ 0.89
SDHAF3-204ENST00000489852 KIF24Q5T7B8 1368 aa20.6■□□□□ 0.89
SDHAF3-204ENST00000489852 ERVV-2B6SEH9 535 aa20.6■□□□□ 0.89
SDHAF3-204ENST00000489852 C21orf2O43822 256 aa20.6■□□□□ 0.89
SDHAF3-204ENST00000489852 PRPF38BQ5VTL8 546 aaKnown RBP20.6■□□□□ 0.89
SDHAF3-204ENST00000489852 USPL1Q5W0Q7 1092 aa20.6■□□□□ 0.89
SDHAF3-204ENST00000489852 L3MBTL3Q96JM7 780 aaPredicted RBP20.6■□□□□ 0.89
SDHAF3-204ENST00000489852 NCAPD2Q15021 1401 aa20.6■□□□□ 0.89
SDHAF3-204ENST00000489852 FYB1O15117 783 aa20.59■□□□□ 0.89
SDHAF3-204ENST00000489852 NFIXQ14938 502 aa20.59■□□□□ 0.89
SDHAF3-204ENST00000489852 PAXIP1Q6ZW49 1069 aaPredicted RBP20.59■□□□□ 0.89
SDHAF3-204ENST00000489852 CNTROBQ8N137 903 aa20.59■□□□□ 0.89
SDHAF3-204ENST00000489852 GPR101Q96P66 508 aaPredicted RBP20.59■□□□□ 0.89
SDHAF3-204ENST00000489852 TAOK3Q9H2K8 898 aa20.59■□□□□ 0.89
SDHAF3-204ENST00000489852 FER1L6Q2WGJ9 1857 aa20.58■□□□□ 0.89
SDHAF3-204ENST00000489852 PTCD1O75127 700 aaKnown RBP20.58■□□□□ 0.89
SDHAF3-204ENST00000489852 ECE1P42892 770 aa20.58■□□□□ 0.89
SDHAF3-204ENST00000489852 CAPNS2Q96L46 248 aa20.58■□□□□ 0.89
SDHAF3-204ENST00000489852 TONSLQ96HA7 1378 aa20.58■□□□□ 0.88
SDHAF3-204ENST00000489852 THSD7BQ9C0I4 1608 aa20.57■□□□□ 0.88
SDHAF3-204ENST00000489852 SERPINB2P05120 415 aa20.57■□□□□ 0.88
SDHAF3-204ENST00000489852 GRM1Q13255 1194 aa20.57■□□□□ 0.88
SDHAF3-204ENST00000489852 ZNF622Q969S3 477 aaKnown RBP eCLIP20.57■□□□□ 0.88
SDHAF3-204ENST00000489852 NRXN2Q9P2S2 1712 aa20.57■□□□□ 0.88
SDHAF3-204ENST00000489852 LTBP3Q9NS15 1303 aa20.56■□□□□ 0.88
SDHAF3-204ENST00000489852 DGKZQ13574 1117 aa20.56■□□□□ 0.88
SDHAF3-204ENST00000489852 MAP1SQ66K74 1059 aaPredicted RBP20.56■□□□□ 0.88
SDHAF3-204ENST00000489852 HACL1Q9UJ83 578 aa20.55■□□□□ 0.88
SDHAF3-204ENST00000489852 ADAMTS7Q9UKP4 1686 aa20.54■□□□□ 0.88
SDHAF3-204ENST00000489852 INTS5Q6P9B9 1019 aaKnown RBP20.54■□□□□ 0.88
SDHAF3-204ENST00000489852 EPHX2P34913 555 aa20.53■□□□□ 0.88
SDHAF3-204ENST00000489852 CABP4P57796 275 aa20.53■□□□□ 0.88
SDHAF3-204ENST00000489852 CYP4F22Q6NT55 531 aa20.53■□□□□ 0.88
SDHAF3-204ENST00000489852 PNMA8AQ86V59 439 aaPredicted RBP20.53■□□□□ 0.88
SDHAF3-204ENST00000489852 CARMIL3Q8ND23 1372 aa20.53■□□□□ 0.88
SDHAF3-204ENST00000489852 CASP8AP2Q9UKL3 1982 aa20.52■□□□□ 0.88
SDHAF3-204ENST00000489852 ADAMTSL1Q8N6G6 1762 aa20.52■□□□□ 0.88
SDHAF3-204ENST00000489852 EYA1Q99502 592 aa20.52■□□□□ 0.88
SDHAF3-204ENST00000489852 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
SDHAF3-204ENST00000489852 DDX21Q9NR30 783 aaKnown RBP eCLIP20.52■□□□□ 0.88
SDHAF3-204ENST00000489852 EMILIN1Q9Y6C2 1016 aa20.52■□□□□ 0.88
SDHAF3-204ENST00000489852 CA12O43570 354 aa20.51■□□□□ 0.87
SDHAF3-204ENST00000489852 HSP90AB1P08238 724 aaKnown RBP20.51■□□□□ 0.87
SDHAF3-204ENST00000489852 LTBP1Q14766 1721 aa20.5■□□□□ 0.87
SDHAF3-204ENST00000489852 PPM1GO15355 546 aaPredicted RBP20.5■□□□□ 0.87
SDHAF3-204ENST00000489852 SOX10P56693 466 aa20.5■□□□□ 0.87
SDHAF3-204ENST00000489852 NARFQ9UHQ1 456 aa20.5■□□□□ 0.87
SDHAF3-204ENST00000489852 MAP2K2P36507 400 aa20.49■□□□□ 0.87
SDHAF3-204ENST00000489852 PDZRN3Q9UPQ7 1066 aa20.49■□□□□ 0.87
SDHAF3-204ENST00000489852 TJP1Q07157 1748 aa20.48■□□□□ 0.87
SDHAF3-204ENST00000489852 AOC2O75106 756 aa20.48■□□□□ 0.87
SDHAF3-204ENST00000489852 SOS1Q07889 1333 aaPredicted RBP20.48■□□□□ 0.87
SDHAF3-204ENST00000489852 PDE6BP35913 854 aa20.47■□□□□ 0.87
SDHAF3-204ENST00000489852 SOGA3Q5TF21 947 aa20.46■□□□□ 0.87
SDHAF3-204ENST00000489852 BCL2L12Q9HB09 334 aa20.46■□□□□ 0.87
SDHAF3-204ENST00000489852 ZNF541Q9H0D2 1346 aa20.46■□□□□ 0.87
SDHAF3-204ENST00000489852 BRIP1Q9BX63 1249 aa20.45■□□□□ 0.86
SDHAF3-204ENST00000489852 RNF123Q5XPI4 1314 aa20.45■□□□□ 0.86
SDHAF3-204ENST00000489852 BICDL1Q6ZP65 573 aa20.44■□□□□ 0.86
SDHAF3-204ENST00000489852 WASHC2AQ641Q2 1341 aa20.44■□□□□ 0.86
SDHAF3-204ENST00000489852 FMR1Q06787 632 aaKnown RBP eCLIP20.43■□□□□ 0.86
SDHAF3-204ENST00000489852 DNAJC10Q8IXB1 793 aa20.43■□□□□ 0.86
SDHAF3-204ENST00000489852 NFATC2IPQ8NCF5 419 aa20.43■□□□□ 0.86
SDHAF3-204ENST00000489852 CNKSR1Q969H4 720 aa20.43■□□□□ 0.86
SDHAF3-204ENST00000489852 COL15A1P39059 1388 aa20.43■□□□□ 0.86
SDHAF3-204ENST00000489852 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
SDHAF3-204ENST00000489852 TLL2Q9Y6L7 1015 aa20.42■□□□□ 0.86
SDHAF3-204ENST00000489852 COL11A2P13942 1736 aaPredicted RBP20.41■□□□□ 0.86
SDHAF3-204ENST00000489852 SLX4Q8IY92 1834 aa20.41■□□□□ 0.86
SDHAF3-204ENST00000489852 KIF20BQ96Q89 1820 aa20.41■□□□□ 0.86
SDHAF3-204ENST00000489852 CST9Q5W186 159 aa20.41■□□□□ 0.86
SDHAF3-204ENST00000489852 PRPF40BQ6NWY9 871 aaKnown RBP20.41■□□□□ 0.86
SDHAF3-204ENST00000489852 ST20-MTHFSA0A0A6YYL1 179 aa20.4■□□□□ 0.86
SDHAF3-204ENST00000489852 MTHFSP49914 203 aa20.4■□□□□ 0.86
SDHAF3-204ENST00000489852 BRPF1P55201 1214 aaPredicted RBP20.4■□□□□ 0.86
SDHAF3-204ENST00000489852 CCDC24Q8N4L8 307 aa20.4■□□□□ 0.86
SDHAF3-204ENST00000489852 GCC1Q96CN9 775 aa20.4■□□□□ 0.86
SDHAF3-204ENST00000489852 PLEKHO1Q53GL0 409 aaPredicted RBP20.39■□□□□ 0.85
SDHAF3-204ENST00000489852 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
SDHAF3-204ENST00000489852 SIN3AQ96ST3 1273 aa20.39■□□□□ 0.85
SDHAF3-204ENST00000489852 CYP19A1P11511 503 aaPredicted RBP20.38■□□□□ 0.85
SDHAF3-204ENST00000489852 STYK1Q6J9G0 422 aa20.38■□□□□ 0.85
SDHAF3-204ENST00000489852 CACNA1SQ13698 1873 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms