RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 TUBGCP6Q96RT7 1819 aa14.08□□□□□ -0.16
TFF3-203ENST00000489676 CACNA1FO60840 1977 aa14.07□□□□□ -0.16
TFF3-203ENST00000489676 BAG6P46379 1132 aa14.07□□□□□ -0.16
TFF3-203ENST00000489676 KCNQ4P56696 695 aa14.07□□□□□ -0.16
TFF3-203ENST00000489676 ZNF428Q96B54 188 aa14.07□□□□□ -0.16
TFF3-203ENST00000489676 UBR3Q6ZT12 1888 aa14.07□□□□□ -0.16
TFF3-203ENST00000489676 CNTNAP4Q9C0A0 1308 aa14.07□□□□□ -0.16
TFF3-203ENST00000489676 EN1Q05925 392 aaPredicted RBP14.06□□□□□ -0.16
TFF3-203ENST00000489676 PDIA6Q15084 440 aa14.06□□□□□ -0.16
TFF3-203ENST00000489676 HDGFL1Q5TGJ6 251 aa14.06□□□□□ -0.16
TFF3-203ENST00000489676 LRP10Q7Z4F1 713 aa14.06□□□□□ -0.16
TFF3-203ENST00000489676 DEFB132Q7Z7B7 95 aa14.06□□□□□ -0.16
TFF3-203ENST00000489676 TEX13AQ9BXU3 409 aaPredicted RBP14.06□□□□□ -0.16
TFF3-203ENST00000489676 ERBB4Q15303 1308 aa14.06□□□□□ -0.16
TFF3-203ENST00000489676 QSER1Q2KHR3 1735 aa14.05□□□□□ -0.16
TFF3-203ENST00000489676 CRKLP46109 303 aaKnown RBP14.05□□□□□ -0.16
TFF3-203ENST00000489676 RARSP54136 660 aaKnown RBP14.05□□□□□ -0.16
TFF3-203ENST00000489676 SF3B2Q13435 895 aaKnown RBP14.05□□□□□ -0.16
TFF3-203ENST00000489676 EZH2Q15910 746 aaKnown RBP14.05□□□□□ -0.16
TFF3-203ENST00000489676 LRP5O75197 1615 aa14.04□□□□□ -0.16
TFF3-203ENST00000489676 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
TFF3-203ENST00000489676 NBPF26B4DH59 902 aa14.04□□□□□ -0.16
TFF3-203ENST00000489676 STARD3NLO95772 234 aa14.04□□□□□ -0.16
TFF3-203ENST00000489676 NBPF14Q5TI25 921 aa14.04□□□□□ -0.16
TFF3-203ENST00000489676 NBPF10Q6P3W6 841 aaKnown RBP14.04□□□□□ -0.16
TFF3-203ENST00000489676 INTS5Q6P9B9 1019 aaKnown RBP14.04□□□□□ -0.16
TFF3-203ENST00000489676 NBPF15Q8N660 670 aa14.04□□□□□ -0.16
TFF3-203ENST00000489676 ZBTB1Q9Y2K1 713 aa14.04□□□□□ -0.16
TFF3-203ENST00000489676 A1BGP04217 495 aa14.03□□□□□ -0.16
TFF3-203ENST00000489676 EIF2S2P20042 333 aaKnown RBP14.03□□□□□ -0.16
TFF3-203ENST00000489676 BRPF1P55201 1214 aaPredicted RBP14.03□□□□□ -0.16
TFF3-203ENST00000489676 PROSER3Q2NL68 480 aa14.03□□□□□ -0.16
TFF3-203ENST00000489676 ALDH1L2Q3SY69 923 aa14.03□□□□□ -0.16
TFF3-203ENST00000489676 RC3H1Q5TC82 1133 aaKnown RBP14.03□□□□□ -0.16
TFF3-203ENST00000489676 CCDC30Q5VVM6 783 aa14.03□□□□□ -0.16
TFF3-203ENST00000489676 SSH1Q8WYL5 1049 aa14.03□□□□□ -0.16
TFF3-203ENST00000489676 NECTIN2Q92692 538 aa14.03□□□□□ -0.16
TFF3-203ENST00000489676 CCDC87Q9NVE4 849 aa14.03□□□□□ -0.16
TFF3-203ENST00000489676 CHPF2Q9P2E5 772 aa14.03□□□□□ -0.16
TFF3-203ENST00000489676 SCN7AQ01118 1682 aa14.03□□□□□ -0.16
TFF3-203ENST00000489676 BCORQ6W2J9 1755 aa14.02□□□□□ -0.16
TFF3-203ENST00000489676 ANO8Q9HCE9 1232 aaPredicted RBP14.02□□□□□ -0.17
TFF3-203ENST00000489676 DDX21Q9NR30 783 aaKnown RBP eCLIP14.02□□□□□ -0.17
TFF3-203ENST00000489676 TCERG1O14776 1098 aaKnown RBP14.01□□□□□ -0.17
TFF3-203ENST00000489676 PIP4K2AP48426 406 aaPredicted RBP14.01□□□□□ -0.17
TFF3-203ENST00000489676 ZNF827Q17R98 1081 aa14.01□□□□□ -0.17
TFF3-203ENST00000489676 AMIGO3Q86WK7 504 aa14.01□□□□□ -0.17
TFF3-203ENST00000489676 MRPL50Q8N5N7 158 aaKnown RBP14.01□□□□□ -0.17
TFF3-203ENST00000489676 AKT1S1Q96B36 256 aa14.01□□□□□ -0.17
TFF3-203ENST00000489676 CHMP4AQ9BY43 222 aa14.01□□□□□ -0.17
TFF3-203ENST00000489676 DBF4Q9UBU7 674 aaPredicted RBP14.01□□□□□ -0.17
TFF3-203ENST00000489676 RCAN3Q9UKA8 241 aa14.01□□□□□ -0.17
TFF3-203ENST00000489676 ANXA1P04083 346 aa14□□□□□ -0.17
TFF3-203ENST00000489676 BCL2L13Q9BXK5 485 aa14□□□□□ -0.17
TFF3-203ENST00000489676 N4BP2Q86UW6 1770 aaPredicted RBP14□□□□□ -0.17
TFF3-203ENST00000489676 ARFGEF2Q9Y6D5 1785 aa13.99□□□□□ -0.17
TFF3-203ENST00000489676 COL15A1P39059 1388 aa13.99□□□□□ -0.17
TFF3-203ENST00000489676 IL6STP40189 918 aaPredicted RBP13.99□□□□□ -0.17
TFF3-203ENST00000489676 EIF5P55010 431 aaKnown RBP13.99□□□□□ -0.17
TFF3-203ENST00000489676 STK31Q9BXU1 1019 aa13.99□□□□□ -0.17
TFF3-203ENST00000489676 SMC4Q9NTJ3 1288 aa13.99□□□□□ -0.17
TFF3-203ENST00000489676 GNPATO15228 680 aa13.98□□□□□ -0.17
TFF3-203ENST00000489676 RPS6KA4O75676 772 aa13.98□□□□□ -0.17
TFF3-203ENST00000489676 BCAR3O75815 825 aa13.98□□□□□ -0.17
TFF3-203ENST00000489676 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
TFF3-203ENST00000489676 HMGB2P26583 209 aaKnown RBP13.98□□□□□ -0.17
TFF3-203ENST00000489676 G2E3Q7L622 706 aa13.98□□□□□ -0.17
TFF3-203ENST00000489676 PHAXQ9H814 394 aaKnown RBP13.98□□□□□ -0.17
TFF3-203ENST00000489676 HYPKQ9NX55 129 aa13.98□□□□□ -0.17
TFF3-203ENST00000489676 KIF16BQ96L93 1317 aa13.97□□□□□ -0.17
TFF3-203ENST00000489676 MYL6BP14649 208 aa13.97□□□□□ -0.17
TFF3-203ENST00000489676 CANXP27824 592 aaKnown RBP13.97□□□□□ -0.17
TFF3-203ENST00000489676 FLIIQ13045 1269 aa13.97□□□□□ -0.17
TFF3-203ENST00000489676 AK7Q96M32 723 aa13.97□□□□□ -0.17
TFF3-203ENST00000489676 ANKRD36CQ5JPF3 1778 aa13.96□□□□□ -0.17
TFF3-203ENST00000489676 RNF123Q5XPI4 1314 aa13.96□□□□□ -0.17
TFF3-203ENST00000489676 CASZ1Q86V15 1759 aa13.96□□□□□ -0.18
TFF3-203ENST00000489676 ADCY9O60503 1353 aa13.96□□□□□ -0.18
TFF3-203ENST00000489676 PXDNLA1KZ92 1463 aa13.95□□□□□ -0.18
TFF3-203ENST00000489676 ADRA2BP18089 450 aa13.95□□□□□ -0.18
TFF3-203ENST00000489676 SSFA2P28290 1259 aa13.95□□□□□ -0.18
TFF3-203ENST00000489676 TTLL7Q6ZT98 887 aa13.95□□□□□ -0.18
TFF3-203ENST00000489676 SMIM5Q71RC9 77 aa13.95□□□□□ -0.18
TFF3-203ENST00000489676 XAGE3Q8WTP9 111 aa13.95□□□□□ -0.18
TFF3-203ENST00000489676 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
TFF3-203ENST00000489676 PTPRCP08575 1304 aa13.94□□□□□ -0.18
TFF3-203ENST00000489676 PNPLA7Q6ZV29 1317 aa13.94□□□□□ -0.18
TFF3-203ENST00000489676 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
TFF3-203ENST00000489676 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
TFF3-203ENST00000489676 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
TFF3-203ENST00000489676 NUP98P52948 1817 aa13.94□□□□□ -0.18
TFF3-203ENST00000489676 COL24A1Q17RW2 1714 aa13.93□□□□□ -0.18
TFF3-203ENST00000489676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.93□□□□□ -0.18
TFF3-203ENST00000489676 MAP3K15Q6ZN16 1313 aa13.92□□□□□ -0.18
TFF3-203ENST00000489676 USP42Q9H9J4 1324 aaKnown RBP13.92□□□□□ -0.18
TFF3-203ENST00000489676 CAMTA2O94983 1202 aa13.92□□□□□ -0.18
TFF3-203ENST00000489676 TRIM27P14373 513 aa13.92□□□□□ -0.18
TFF3-203ENST00000489676 DZIP3Q86Y13 1208 aaKnown RBP13.92□□□□□ -0.18
TFF3-203ENST00000489676 PLBD2Q8NHP8 589 aa13.92□□□□□ -0.18
TFF3-203ENST00000489676 ARHGAP45Q92619 1136 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms