RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 CASZ1Q86V15 1759 aa6.87□□□□□ -1.31
PRDM1-207ENST00000489365 MEGF6O75095 1541 aa6.87□□□□□ -1.31
PRDM1-207ENST00000489365 HSP90AB1P08238 724 aaKnown RBP6.87□□□□□ -1.31
PRDM1-207ENST00000489365 PTGER2P43116 358 aa6.87□□□□□ -1.31
PRDM1-207ENST00000489365 TNNT2P45379 298 aaPredicted RBP6.87□□□□□ -1.31
PRDM1-207ENST00000489365 SLAIN1Q8ND83 568 aa6.87□□□□□ -1.31
PRDM1-207ENST00000489365 SYT17Q9BSW7 474 aa6.87□□□□□ -1.31
PRDM1-207ENST00000489365 TMOD3Q9NYL9 352 aa6.87□□□□□ -1.31
PRDM1-207ENST00000489365 DOT1LQ8TEK3 1739 aa6.87□□□□□ -1.31
PRDM1-207ENST00000489365 NSD2O96028 1365 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 PALLDQ8WX93 1383 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 WASHC2AQ641Q2 1341 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 FBLN1P23142 703 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 E2F4Q16254 413 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 ZNF827Q17R98 1081 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 CDAN1Q8IWY9 1227 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 PLPP6Q8IY26 295 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 PDGFDQ9GZP0 370 aaPredicted RBP6.86□□□□□ -1.31
PRDM1-207ENST00000489365 LRRC4BQ9NT99 713 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 KNSTRNQ9Y448 316 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 EMILIN1Q9Y6C2 1016 aa6.86□□□□□ -1.31
PRDM1-207ENST00000489365 MAP3K5Q99683 1374 aa6.85□□□□□ -1.31
PRDM1-207ENST00000489365 MYOM1P52179 1685 aa6.85□□□□□ -1.31
PRDM1-207ENST00000489365 GRIN3BO60391 1043 aa6.85□□□□□ -1.31
PRDM1-207ENST00000489365 CAMK2BQ13554 666 aa6.85□□□□□ -1.31
PRDM1-207ENST00000489365 C1orf141Q5JVX7 400 aa6.85□□□□□ -1.31
PRDM1-207ENST00000489365 MORC1Q86VD1 984 aa6.85□□□□□ -1.31
PRDM1-207ENST00000489365 IFNL2Q8IZJ0 200 aa6.85□□□□□ -1.31
PRDM1-207ENST00000489365 CARD14Q9BXL6 1004 aa6.85□□□□□ -1.31
PRDM1-207ENST00000489365 PLEKHG2Q9H7P9 1386 aa6.84□□□□□ -1.31
PRDM1-207ENST00000489365 PAPPAQ13219 1627 aa6.84□□□□□ -1.31
PRDM1-207ENST00000489365 PNPLA7Q6ZV29 1317 aa6.84□□□□□ -1.31
PRDM1-207ENST00000489365 AMOTQ4VCS5 1084 aa6.84□□□□□ -1.31
PRDM1-207ENST00000489365 PLEKHO1Q53GL0 409 aaPredicted RBP6.84□□□□□ -1.31
PRDM1-207ENST00000489365 KCNV2Q8TDN2 545 aa6.84□□□□□ -1.31
PRDM1-207ENST00000489365 RGPD2P0DJD1 1756 aa6.83□□□□□ -1.32
PRDM1-207ENST00000489365 HSPA5P11021 654 aaKnown RBP6.83□□□□□ -1.32
PRDM1-207ENST00000489365 KCNQ4P56696 695 aa6.83□□□□□ -1.32
PRDM1-207ENST00000489365 EYA1Q99502 592 aa6.83□□□□□ -1.32
PRDM1-207ENST00000489365 PANK3Q9H999 370 aa6.83□□□□□ -1.32
PRDM1-207ENST00000489365 POLKQ9UBT6 870 aa6.83□□□□□ -1.32
PRDM1-207ENST00000489365 QSER1Q2KHR3 1735 aa6.83□□□□□ -1.32
PRDM1-207ENST00000489365 LOC102724428A0A0B4J2F2 783 aa6.82□□□□□ -1.32
PRDM1-207ENST00000489365 CYP27B1O15528 508 aa6.82□□□□□ -1.32
PRDM1-207ENST00000489365 ST18O60284 1047 aa6.82□□□□□ -1.32
PRDM1-207ENST00000489365 PHF14O94880 888 aa6.82□□□□□ -1.32
PRDM1-207ENST00000489365 SSFA2P28290 1259 aa6.82□□□□□ -1.32
PRDM1-207ENST00000489365 ATP6V1AP38606 617 aa6.82□□□□□ -1.32
PRDM1-207ENST00000489365 SIK1P57059 783 aa6.82□□□□□ -1.32
PRDM1-207ENST00000489365 CABP4P57796 275 aa6.82□□□□□ -1.32
PRDM1-207ENST00000489365 DCAF5Q96JK2 942 aa6.82□□□□□ -1.32
PRDM1-207ENST00000489365 CD2APQ9Y5K6 639 aa6.82□□□□□ -1.32
PRDM1-207ENST00000489365 LY75O60449 1722 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 C5P01031 1676 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 MAP2P11137 1827 aaKnown RBP6.81□□□□□ -1.32
PRDM1-207ENST00000489365 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.81□□□□□ -1.32
PRDM1-207ENST00000489365 ERVV-2B6SEH9 535 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 GNPATO15228 680 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 PHKG2P15735 406 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 MTHFSP49914 203 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 EIF4A2Q14240 407 aaKnown RBP6.81□□□□□ -1.32
PRDM1-207ENST00000489365 MSL1Q68DK7 614 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 ZNF530Q6P9A1 599 aaPredicted RBP6.81□□□□□ -1.32
PRDM1-207ENST00000489365 COL23A1Q86Y22 540 aaPredicted RBP6.81□□□□□ -1.32
PRDM1-207ENST00000489365 PIGBQ92521 554 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 EMILIN3Q9NT22 766 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 RTCBQ9Y3I0 505 aaKnown RBP6.81□□□□□ -1.32
PRDM1-207ENST00000489365 ARIH1Q9Y4X5 557 aaPredicted RBP6.81□□□□□ -1.32
PRDM1-207ENST00000489365 PKD1L3Q7Z443 1732 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 SHANK3Q9BYB0 1731 aa6.81□□□□□ -1.32
PRDM1-207ENST00000489365 GIGYF1O75420 1035 aaPredicted RBP6.8□□□□□ -1.32
PRDM1-207ENST00000489365 ZNF784Q8NCA9 323 aaPredicted RBP6.8□□□□□ -1.32
PRDM1-207ENST00000489365 ARHGEF1Q92888 912 aaKnown RBP6.8□□□□□ -1.32
PRDM1-207ENST00000489365 ANKRD26Q9UPS8 1709 aa6.8□□□□□ -1.32
PRDM1-207ENST00000489365 CHD4Q14839 1912 aa6.8□□□□□ -1.32
PRDM1-207ENST00000489365 IGSF1Q8N6C5 1336 aa6.79□□□□□ -1.32
PRDM1-207ENST00000489365 NCAPD2Q15021 1401 aa6.79□□□□□ -1.32
PRDM1-207ENST00000489365 SNPHO15079 494 aa6.79□□□□□ -1.32
PRDM1-207ENST00000489365 SLC34A2O95436 690 aa6.79□□□□□ -1.32
PRDM1-207ENST00000489365 RFC4P35249 363 aa6.79□□□□□ -1.32
PRDM1-207ENST00000489365 TRAPPC3LQ5T215 181 aa6.79□□□□□ -1.32
PRDM1-207ENST00000489365 SULT6B1Q6IMI4 303 aa6.79□□□□□ -1.32
PRDM1-207ENST00000489365 NPM2Q86SE8 214 aaKnown RBP6.79□□□□□ -1.32
PRDM1-207ENST00000489365 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
PRDM1-207ENST00000489365 C4BP0C0L5 1744 aa6.79□□□□□ -1.32
PRDM1-207ENST00000489365 OXER1Q8TDS5 423 aa6.78□□□□□ -1.32
PRDM1-207ENST00000489365 CFAP53Q96M91 514 aa6.78□□□□□ -1.32
PRDM1-207ENST00000489365 CCDC87Q9NVE4 849 aa6.78□□□□□ -1.32
PRDM1-207ENST00000489365 ASAP1Q9ULH1 1129 aa6.78□□□□□ -1.32
PRDM1-207ENST00000489365 ITGB4P16144 1822 aa6.78□□□□□ -1.32
PRDM1-207ENST00000489365 HOXB3P14651 431 aaPredicted RBP6.77□□□□□ -1.33
PRDM1-207ENST00000489365 AKAP4Q5JQC9 854 aa6.77□□□□□ -1.33
PRDM1-207ENST00000489365 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
PRDM1-207ENST00000489365 NLGN2Q8NFZ4 835 aa6.77□□□□□ -1.33
PRDM1-207ENST00000489365 PTCD2Q8WV60 388 aaKnown RBP6.77□□□□□ -1.33
PRDM1-207ENST00000489365 ATG3Q9NT62 314 aa6.77□□□□□ -1.33
PRDM1-207ENST00000489365 PARP3Q9Y6F1 533 aa6.77□□□□□ -1.33
PRDM1-207ENST00000489365 TUBGCP6Q96RT7 1819 aa6.77□□□□□ -1.33
PRDM1-207ENST00000489365 CNTNAP4Q9C0A0 1308 aa6.76□□□□□ -1.33
PRDM1-207ENST00000489365 UTRNP46939 3433 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms