RNA–Protein interactions for RNA: ENST00000489302.5

PDZD8-203, Transcript of PDZ domain containing 8, humanhuman

TSL 3

Gene PDZD8, Length 740 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-203ENST00000489302 COL24A1Q17RW2 1714 aa13.5□□□□□ -0.25
PDZD8-203ENST00000489302 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
PDZD8-203ENST00000489302 STARD3NLO95772 234 aa13.5□□□□□ -0.25
PDZD8-203ENST00000489302 WDR43Q15061 677 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDZD8-203ENST00000489302 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
PDZD8-203ENST00000489302 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
PDZD8-203ENST00000489302 NLGN1Q8N2Q7 840 aa13.5□□□□□ -0.25
PDZD8-203ENST00000489302 WWC3Q9ULE0 1092 aa13.5□□□□□ -0.25
PDZD8-203ENST00000489302 ZNF330Q9Y3S2 320 aaPredicted RBP13.5□□□□□ -0.25
PDZD8-203ENST00000489302 HEG1Q9ULI3 1381 aa13.49□□□□□ -0.25
PDZD8-203ENST00000489302 PRAMEF22A3QJZ6 481 aa13.49□□□□□ -0.25
PDZD8-203ENST00000489302 NEUROD2Q15784 382 aa13.49□□□□□ -0.25
PDZD8-203ENST00000489302 USPL1Q5W0Q7 1092 aa13.49□□□□□ -0.25
PDZD8-203ENST00000489302 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
PDZD8-203ENST00000489302 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
PDZD8-203ENST00000489302 ZPR1O75312 459 aa13.48□□□□□ -0.25
PDZD8-203ENST00000489302 NPM3O75607 178 aaKnown RBP13.48□□□□□ -0.25
PDZD8-203ENST00000489302 A1BGP04217 495 aa13.48□□□□□ -0.25
PDZD8-203ENST00000489302 RIPK4P57078 832 aa13.48□□□□□ -0.25
PDZD8-203ENST00000489302 FKBP8Q14318 412 aa13.48□□□□□ -0.25
PDZD8-203ENST00000489302 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
PDZD8-203ENST00000489302 ADAMTS8Q9UP79 889 aa13.48□□□□□ -0.25
PDZD8-203ENST00000489302 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
PDZD8-203ENST00000489302 USP42Q9H9J4 1324 aaKnown RBP13.47□□□□□ -0.25
PDZD8-203ENST00000489302 PIP4K2AP48426 406 aaPredicted RBP13.47□□□□□ -0.25
PDZD8-203ENST00000489302 CD2APQ9Y5K6 639 aa13.47□□□□□ -0.25
PDZD8-203ENST00000489302 USP16Q9Y5T5 823 aa13.47□□□□□ -0.25
PDZD8-203ENST00000489302 PARP3Q9Y6F1 533 aa13.47□□□□□ -0.25
PDZD8-203ENST00000489302 UBR2Q8IWV8 1755 aa13.46□□□□□ -0.25
PDZD8-203ENST00000489302 YY1P25490 414 aa13.46□□□□□ -0.25
PDZD8-203ENST00000489302 TMPOP42166 694 aaKnown RBP13.46□□□□□ -0.25
PDZD8-203ENST00000489302 DLG5Q8TDM6 1919 aa13.46□□□□□ -0.25
PDZD8-203ENST00000489302 COL15A1P39059 1388 aa13.45□□□□□ -0.26
PDZD8-203ENST00000489302 SNRPA1P09661 255 aaKnown RBP13.45□□□□□ -0.26
PDZD8-203ENST00000489302 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
PDZD8-203ENST00000489302 CICQ96RK0 1608 aaPredicted RBP13.45□□□□□ -0.26
PDZD8-203ENST00000489302 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
PDZD8-203ENST00000489302 YBX3P16989 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
PDZD8-203ENST00000489302 EIF5P55010 431 aaKnown RBP13.44□□□□□ -0.26
PDZD8-203ENST00000489302 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
PDZD8-203ENST00000489302 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
PDZD8-203ENST00000489302 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
PDZD8-203ENST00000489302 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
PDZD8-203ENST00000489302 NARFQ9UHQ1 456 aa13.44□□□□□ -0.26
PDZD8-203ENST00000489302 DDR1Q08345 913 aa13.43□□□□□ -0.26
PDZD8-203ENST00000489302 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
PDZD8-203ENST00000489302 A0A087WZG4 1122 aa13.42□□□□□ -0.26
PDZD8-203ENST00000489302 SENP3-EIF4A1A0A087X0R7 540 aa13.42□□□□□ -0.26
PDZD8-203ENST00000489302 A0A0G2JLW4 131 aa13.42□□□□□ -0.26
PDZD8-203ENST00000489302 TM4SF1P30408 202 aa13.42□□□□□ -0.26
PDZD8-203ENST00000489302 BCL2L12Q9HB09 334 aa13.42□□□□□ -0.26
PDZD8-203ENST00000489302 LAS1LQ9Y4W2 734 aaKnown RBP13.42□□□□□ -0.26
PDZD8-203ENST00000489302 ANP32CO43423 234 aa13.41□□□□□ -0.26
PDZD8-203ENST00000489302 IL6STP40189 918 aaPredicted RBP13.41□□□□□ -0.26
PDZD8-203ENST00000489302 EIF4A1P60842 406 aaKnown RBP13.41□□□□□ -0.26
PDZD8-203ENST00000489302 NFIXQ14938 502 aa13.41□□□□□ -0.26
PDZD8-203ENST00000489302 NGEFQ8N5V2 710 aa13.41□□□□□ -0.26
PDZD8-203ENST00000489302 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
PDZD8-203ENST00000489302 POLRMTO00411 1230 aaKnown RBP13.4□□□□□ -0.26
PDZD8-203ENST00000489302 LMOD3Q0VAK6 560 aa13.4□□□□□ -0.26
PDZD8-203ENST00000489302 DZIP3Q86Y13 1208 aaKnown RBP13.4□□□□□ -0.26
PDZD8-203ENST00000489302 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
PDZD8-203ENST00000489302 APAF1O14727 1248 aa13.39□□□□□ -0.27
PDZD8-203ENST00000489302 GRIN3BO60391 1043 aa13.39□□□□□ -0.27
PDZD8-203ENST00000489302 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
PDZD8-203ENST00000489302 DPEP1P16444 411 aa13.39□□□□□ -0.27
PDZD8-203ENST00000489302 TBC1D9BQ66K14 1250 aa13.39□□□□□ -0.27
PDZD8-203ENST00000489302 NBPF10Q6P3W6 841 aaKnown RBP13.39□□□□□ -0.27
PDZD8-203ENST00000489302 NBPF15Q8N660 670 aa13.39□□□□□ -0.27
PDZD8-203ENST00000489302 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
PDZD8-203ENST00000489302 SERPINB2P05120 415 aa13.38□□□□□ -0.27
PDZD8-203ENST00000489302 TGFB2P61812 414 aa13.38□□□□□ -0.27
PDZD8-203ENST00000489302 CAMTA2O94983 1202 aa13.37□□□□□ -0.27
PDZD8-203ENST00000489302 MYL6BP14649 208 aa13.37□□□□□ -0.27
PDZD8-203ENST00000489302 EIF2S2P20042 333 aaKnown RBP13.37□□□□□ -0.27
PDZD8-203ENST00000489302 CHRNA5P30532 468 aa13.37□□□□□ -0.27
PDZD8-203ENST00000489302 CCDC24Q8N4L8 307 aa13.37□□□□□ -0.27
PDZD8-203ENST00000489302 NECTIN2Q92692 538 aa13.37□□□□□ -0.27
PDZD8-203ENST00000489302 MRS2Q9HD23 443 aa13.37□□□□□ -0.27
PDZD8-203ENST00000489302 BCS1LQ9Y276 419 aa13.37□□□□□ -0.27
PDZD8-203ENST00000489302 C10orf71Q711Q0 1435 aa13.37□□□□□ -0.27
PDZD8-203ENST00000489302 PXDNLA1KZ92 1463 aa13.36□□□□□ -0.27
PDZD8-203ENST00000489302 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
PDZD8-203ENST00000489302 N4BP2Q86UW6 1770 aaPredicted RBP13.36□□□□□ -0.27
PDZD8-203ENST00000489302 KCNA4P22459 653 aa13.36□□□□□ -0.27
PDZD8-203ENST00000489302 NPHP1O15259 732 aa13.35□□□□□ -0.27
PDZD8-203ENST00000489302 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
PDZD8-203ENST00000489302 KRT24Q2M2I5 525 aa13.35□□□□□ -0.27
PDZD8-203ENST00000489302 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
PDZD8-203ENST00000489302 FAM177BA6PVY3 158 aa13.34□□□□□ -0.27
PDZD8-203ENST00000489302 KCNA3P22001 575 aa13.34□□□□□ -0.27
PDZD8-203ENST00000489302 CHL1O00533 1208 aa13.33□□□□□ -0.28
PDZD8-203ENST00000489302 ANXA1P04083 346 aa13.33□□□□□ -0.28
PDZD8-203ENST00000489302 HLFQ16534 295 aa13.33□□□□□ -0.28
PDZD8-203ENST00000489302 TTLL7Q6ZT98 887 aa13.33□□□□□ -0.28
PDZD8-203ENST00000489302 BABAM1Q9NWV8 329 aa13.33□□□□□ -0.28
PDZD8-203ENST00000489302 PIM2Q9P1W9 311 aa13.33□□□□□ -0.28
PDZD8-203ENST00000489302 UTRNP46939 3433 aa13.32□□□□□ -0.28
PDZD8-203ENST00000489302 KIF13BQ9NQT8 1826 aa13.32□□□□□ -0.28
PDZD8-203ENST00000489302 GOLGB1Q14789 3259 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms