RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 SH3D19Q5HYK7 790 aa8.51□□□□□ -1.05
CBWD1-216ENST00000489272 PCDHGC4Q9Y5F7 938 aa8.51□□□□□ -1.05
CBWD1-216ENST00000489272 DNAAF2Q9NVR5 837 aaKnown RBP8.5□□□□□ -1.05
CBWD1-216ENST00000489272 ATP1B4Q9UN42 357 aaPredicted RBP8.5□□□□□ -1.05
CBWD1-216ENST00000489272 LRRN4Q8WUT4 740 aa8.49□□□□□ -1.05
CBWD1-216ENST00000489272 ZCCHC2Q9C0B9 1178 aaKnown RBP8.49□□□□□ -1.05
CBWD1-216ENST00000489272 ELOA3CA0A087WX78 387 aaPredicted RBP8.48□□□□□ -1.05
CBWD1-216ENST00000489272 ELOA3DA6NLF2 546 aaPredicted RBP8.48□□□□□ -1.05
CBWD1-216ENST00000489272 PCBP4P57723 403 aaKnown RBP8.48□□□□□ -1.05
CBWD1-216ENST00000489272 CENPCQ03188 943 aa8.48□□□□□ -1.05
CBWD1-216ENST00000489272 ELOA3BQ3SY89 546 aa8.48□□□□□ -1.05
CBWD1-216ENST00000489272 ZNF468Q5VIY5 522 aaPredicted RBP8.48□□□□□ -1.05
CBWD1-216ENST00000489272 CCDC125Q86Z20 511 aa8.48□□□□□ -1.05
CBWD1-216ENST00000489272 ELOA3Q8NG57 546 aa8.48□□□□□ -1.05
CBWD1-216ENST00000489272 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
CBWD1-216ENST00000489272 ALAS2P22557 587 aa8.47□□□□□ -1.05
CBWD1-216ENST00000489272 C4orf17Q53FE4 359 aa8.47□□□□□ -1.05
CBWD1-216ENST00000489272 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
CBWD1-216ENST00000489272 ESYT1Q9BSJ8 1104 aa8.47□□□□□ -1.05
CBWD1-216ENST00000489272 CD33P20138 364 aa8.46□□□□□ -1.06
CBWD1-216ENST00000489272 GNASQ5JWF2 1037 aa8.46□□□□□ -1.06
CBWD1-216ENST00000489272 CNKSR1Q969H4 720 aa8.46□□□□□ -1.06
CBWD1-216ENST00000489272 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.46□□□□□ -1.06
CBWD1-216ENST00000489272 SSBP4Q9BWG4 385 aaPredicted RBP8.46□□□□□ -1.06
CBWD1-216ENST00000489272 SELPP16109 830 aa8.45□□□□□ -1.06
CBWD1-216ENST00000489272 PROCA1Q8NCQ7 364 aaPredicted RBP8.45□□□□□ -1.06
CBWD1-216ENST00000489272 TRAK2O60296 914 aa8.44□□□□□ -1.06
CBWD1-216ENST00000489272 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
CBWD1-216ENST00000489272 MAPTP10636 758 aaKnown RBP8.44□□□□□ -1.06
CBWD1-216ENST00000489272 NRG1Q02297 640 aaPredicted RBP8.44□□□□□ -1.06
CBWD1-216ENST00000489272 TNP2Q05952 138 aa8.44□□□□□ -1.06
CBWD1-216ENST00000489272 MDFIQ99750 246 aa8.44□□□□□ -1.06
CBWD1-216ENST00000489272 OAS3Q9Y6K5 1087 aaKnown RBP8.44□□□□□ -1.06
CBWD1-216ENST00000489272 M0R082 166 aa8.43□□□□□ -1.06
CBWD1-216ENST00000489272 ATXN7O15265 892 aaPredicted RBP8.43□□□□□ -1.06
CBWD1-216ENST00000489272 IL2RAP01589 272 aa8.43□□□□□ -1.06
CBWD1-216ENST00000489272 NLRP8Q86W28 1048 aa8.43□□□□□ -1.06
CBWD1-216ENST00000489272 ZNF417Q8TAU3 575 aa8.43□□□□□ -1.06
CBWD1-216ENST00000489272 LENG1Q96BZ8 264 aaPredicted RBP8.43□□□□□ -1.06
CBWD1-216ENST00000489272 ZNF587Q96SQ5 575 aaPredicted RBP8.43□□□□□ -1.06
CBWD1-216ENST00000489272 OSBPL3Q9H4L5 887 aa8.43□□□□□ -1.06
CBWD1-216ENST00000489272 RAB6BQ9NRW1 208 aa8.43□□□□□ -1.06
CBWD1-216ENST00000489272 GTF2E1P29083 439 aaPredicted RBP8.42□□□□□ -1.06
CBWD1-216ENST00000489272 SCTRP47872 440 aa8.42□□□□□ -1.06
CBWD1-216ENST00000489272 TMEM214Q6NUQ4 689 aaKnown RBP8.42□□□□□ -1.06
CBWD1-216ENST00000489272 PRR12Q9ULL5 1215 aa8.42□□□□□ -1.06
CBWD1-216ENST00000489272 HRH3Q9Y5N1 445 aa8.42□□□□□ -1.06
CBWD1-216ENST00000489272 GNRH1P01148 92 aa8.41□□□□□ -1.06
CBWD1-216ENST00000489272 SSTR4P31391 388 aa8.41□□□□□ -1.06
CBWD1-216ENST00000489272 NEUROD2Q15784 382 aa8.41□□□□□ -1.06
CBWD1-216ENST00000489272 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
CBWD1-216ENST00000489272 FHDC1Q9C0D6 1143 aaPredicted RBP8.41□□□□□ -1.06
CBWD1-216ENST00000489272 DCDC2BA2VCK2 349 aa8.4□□□□□ -1.06
CBWD1-216ENST00000489272 AP1G2O75843 785 aa8.4□□□□□ -1.06
CBWD1-216ENST00000489272 NID1P14543 1247 aa8.4□□□□□ -1.06
CBWD1-216ENST00000489272 CD97P48960 835 aa8.4□□□□□ -1.06
CBWD1-216ENST00000489272 PNMA1Q8ND90 353 aa8.39□□□□□ -1.07
CBWD1-216ENST00000489272 GP2P55259 537 aaKnown RBP8.38□□□□□ -1.07
CBWD1-216ENST00000489272 MICALL1Q8N3F8 863 aa8.38□□□□□ -1.07
CBWD1-216ENST00000489272 GOPCQ9HD26 462 aa8.38□□□□□ -1.07
CBWD1-216ENST00000489272 USP17L8P0C7I0 530 aa8.37□□□□□ -1.07
CBWD1-216ENST00000489272 C8orf86Q6ZUL3 223 aa8.37□□□□□ -1.07
CBWD1-216ENST00000489272 PCMTD1Q96MG8 357 aaPredicted RBP8.37□□□□□ -1.07
CBWD1-216ENST00000489272 STARD13Q9Y3M8 1113 aa8.37□□□□□ -1.07
CBWD1-216ENST00000489272 KHNYNO15037 678 aaKnown RBP8.36□□□□□ -1.07
CBWD1-216ENST00000489272 RFC5P40937 340 aa8.36□□□□□ -1.07
CBWD1-216ENST00000489272 XAGE2Q96GT9 111 aa8.36□□□□□ -1.07
CBWD1-216ENST00000489272 ADARB2-AS1A8MUL3 147 aa8.35□□□□□ -1.07
CBWD1-216ENST00000489272 ALBP02768 609 aa8.35□□□□□ -1.07
CBWD1-216ENST00000489272 RNF20Q5VTR2 975 aa8.35□□□□□ -1.07
CBWD1-216ENST00000489272 SLC51AQ86UW1 340 aa8.35□□□□□ -1.07
CBWD1-216ENST00000489272 RHBDD1Q8TEB9 315 aa8.35□□□□□ -1.07
CBWD1-216ENST00000489272 TRAPPC3LQ5T215 181 aa8.34□□□□□ -1.07
CBWD1-216ENST00000489272 SHISA2Q6UWI4 295 aa8.34□□□□□ -1.07
CBWD1-216ENST00000489272 TBC1D9Q6ZT07 1266 aa8.34□□□□□ -1.07
CBWD1-216ENST00000489272 IL27Q8NEV9 243 aa8.34□□□□□ -1.07
CBWD1-216ENST00000489272 C1orf216Q8TAB5 229 aa8.34□□□□□ -1.07
CBWD1-216ENST00000489272 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
CBWD1-216ENST00000489272 ATP4AP20648 1035 aa8.33□□□□□ -1.08
CBWD1-216ENST00000489272 SYT9Q86SS6 491 aa8.33□□□□□ -1.08
CBWD1-216ENST00000489272 CCER1Q8TC90 406 aaPredicted RBP8.33□□□□□ -1.08
CBWD1-216ENST00000489272 EPS8L1Q8TE68 723 aa8.33□□□□□ -1.08
CBWD1-216ENST00000489272 HMX1Q9NP08 348 aaPredicted RBP8.33□□□□□ -1.08
CBWD1-216ENST00000489272 A0A0A0MRY4 1105 aa8.32□□□□□ -1.08
CBWD1-216ENST00000489272 BRPF1P55201 1214 aaPredicted RBP8.32□□□□□ -1.08
CBWD1-216ENST00000489272 SIN3BO75182 1162 aa8.31□□□□□ -1.08
CBWD1-216ENST00000489272 FAM157BP0CG42 384 aa8.31□□□□□ -1.08
CBWD1-216ENST00000489272 TMEM259Q4ZIN3 620 aa8.31□□□□□ -1.08
CBWD1-216ENST00000489272 PPARGC1BQ86YN6 1023 aaKnown RBP8.31□□□□□ -1.08
CBWD1-216ENST00000489272 MARK1Q9P0L2 795 aa8.31□□□□□ -1.08
CBWD1-216ENST00000489272 USP21Q9UK80 565 aa8.31□□□□□ -1.08
CBWD1-216ENST00000489272 KIAA1324LA8MWY0 1029 aaPredicted RBP8.3□□□□□ -1.08
CBWD1-216ENST00000489272 KRTAP9-8Q9BYQ0 159 aa8.3□□□□□ -1.08
CBWD1-216ENST00000489272 PCDHB9Q9Y5E1 797 aa8.3□□□□□ -1.08
CBWD1-216ENST00000489272 TPRNQ4KMQ1 711 aa8.29□□□□□ -1.08
CBWD1-216ENST00000489272 PRR23CQ6ZRP0 262 aa8.29□□□□□ -1.08
CBWD1-216ENST00000489272 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
CBWD1-216ENST00000489272 PCDHB11Q9Y5F2 797 aa8.29□□□□□ -1.08
CBWD1-216ENST00000489272 A0A1W2PNR3 127 aa8.28□□□□□ -1.08
CBWD1-216ENST00000489272 KRTAP9-7A8MTY7 169 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms