RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 USP17L8P0C7I0 530 aa7.6□□□□□ -1.19
ATG4A-208ENST00000489247 CTHP32929 405 aa7.6□□□□□ -1.19
ATG4A-208ENST00000489247 KCNH2Q12809 1159 aa7.6□□□□□ -1.19
ATG4A-208ENST00000489247 HMX1Q9NP08 348 aaPredicted RBP7.6□□□□□ -1.19
ATG4A-208ENST00000489247 ERVK-7P63135 1459 aa7.6□□□□□ -1.19
ATG4A-208ENST00000489247 ADGRB1O14514 1584 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 SPATA31D1Q6ZQQ2 1576 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 ADGRF5Q8IZF2 1346 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 NEXMIFQ5QGS0 1516 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 SIGLEC1Q9BZZ2 1709 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 RPIAP49247 311 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 FLIIQ13045 1269 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 TRIM32Q13049 653 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 YTHDC1Q96MU7 727 aaKnown RBP7.59□□□□□ -1.19
ATG4A-208ENST00000489247 UNC93B1Q9H1C4 597 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 C14orf93Q9H972 538 aaKnown RBP7.59□□□□□ -1.19
ATG4A-208ENST00000489247 MROH2AA6NES4 1674 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 MYO3AQ8NEV4 1616 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 KIF1BO60333 1816 aa7.59□□□□□ -1.19
ATG4A-208ENST00000489247 DISP3Q9P2K9 1392 aa7.59□□□□□ -1.2
ATG4A-208ENST00000489247 ZBTB24O43167 697 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-208ENST00000489247 TMF1P82094 1093 aa7.58□□□□□ -1.2
ATG4A-208ENST00000489247 CTC1Q2NKJ3 1217 aa7.58□□□□□ -1.2
ATG4A-208ENST00000489247 CDCA8Q53HL2 280 aa7.58□□□□□ -1.2
ATG4A-208ENST00000489247 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
ATG4A-208ENST00000489247 INSRP06213 1382 aa7.58□□□□□ -1.2
ATG4A-208ENST00000489247 NPC1L1Q9UHC9 1359 aa7.58□□□□□ -1.2
ATG4A-208ENST00000489247 PPLO60437 1756 aa7.57□□□□□ -1.2
ATG4A-208ENST00000489247 SKOR1P84550 965 aa7.57□□□□□ -1.2
ATG4A-208ENST00000489247 RALBP1Q15311 655 aa7.57□□□□□ -1.2
ATG4A-208ENST00000489247 NR6A1Q15406 480 aa7.57□□□□□ -1.2
ATG4A-208ENST00000489247 LINC01559Q495D7 138 aa7.57□□□□□ -1.2
ATG4A-208ENST00000489247 PUS7Q96PZ0 661 aaKnown RBP7.57□□□□□ -1.2
ATG4A-208ENST00000489247 PARD3Q8TEW0 1356 aa7.57□□□□□ -1.2
ATG4A-208ENST00000489247 PREX1Q8TCU6 1659 aa7.57□□□□□ -1.2
ATG4A-208ENST00000489247 TMEM131LA2VDJ0 1609 aa7.56□□□□□ -1.2
ATG4A-208ENST00000489247 SNRPBP14678 240 aaKnown RBP7.56□□□□□ -1.2
ATG4A-208ENST00000489247 IDI1Q13907 227 aa7.56□□□□□ -1.2
ATG4A-208ENST00000489247 MCM6Q14566 821 aa7.56□□□□□ -1.2
ATG4A-208ENST00000489247 TMEM259Q4ZIN3 620 aa7.56□□□□□ -1.2
ATG4A-208ENST00000489247 CFAP70Q5T0N1 1121 aa7.56□□□□□ -1.2
ATG4A-208ENST00000489247 BAP1Q92560 729 aa7.56□□□□□ -1.2
ATG4A-208ENST00000489247 SNRKQ9NRH2 765 aa7.56□□□□□ -1.2
ATG4A-208ENST00000489247 BRD4O60885 1362 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-208ENST00000489247 CD2BP2O95400 341 aaKnown RBP7.55□□□□□ -1.2
ATG4A-208ENST00000489247 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-208ENST00000489247 FOXC1Q12948 553 aa7.55□□□□□ -1.2
ATG4A-208ENST00000489247 PKD2L1Q9P0L9 805 aa7.55□□□□□ -1.2
ATG4A-208ENST00000489247 SH3BP2P78314 561 aa7.54□□□□□ -1.2
ATG4A-208ENST00000489247 KCTD17Q8N5Z5 321 aa7.54□□□□□ -1.2
ATG4A-208ENST00000489247 CLUAP1Q96AJ1 413 aa7.54□□□□□ -1.2
ATG4A-208ENST00000489247 TRIM34Q9BYJ4 488 aa7.54□□□□□ -1.2
ATG4A-208ENST00000489247 LRPPRCP42704 1394 aaKnown RBP7.54□□□□□ -1.2
ATG4A-208ENST00000489247 MYBBP1AQ9BQG0 1328 aaKnown RBP7.53□□□□□ -1.2
ATG4A-208ENST00000489247 GMPRP36959 345 aa7.53□□□□□ -1.2
ATG4A-208ENST00000489247 MTMR14Q8NCE2 650 aa7.53□□□□□ -1.2
ATG4A-208ENST00000489247 GJD4Q96KN9 370 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-208ENST00000489247 A2ML1A8K2U0 1454 aa7.53□□□□□ -1.2
ATG4A-208ENST00000489247 ASXL1Q8IXJ9 1541 aa7.52□□□□□ -1.2
ATG4A-208ENST00000489247 CCDC184Q52MB2 194 aa7.52□□□□□ -1.21
ATG4A-208ENST00000489247 ZNF511Q8NB15 262 aa7.52□□□□□ -1.21
ATG4A-208ENST00000489247 SLC16A10Q8TF71 515 aa7.52□□□□□ -1.21
ATG4A-208ENST00000489247 MRS2Q9HD23 443 aa7.52□□□□□ -1.21
ATG4A-208ENST00000489247 ZBED9Q6R2W3 1325 aa7.52□□□□□ -1.21
ATG4A-208ENST00000489247 CENPJQ9HC77 1338 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-208ENST00000489247 TSPOAP1O95153 1857 aa7.51□□□□□ -1.21
ATG4A-208ENST00000489247 KDM5AP29375 1690 aaKnown RBP7.51□□□□□ -1.21
ATG4A-208ENST00000489247 ZMYM3Q14202 1370 aa7.51□□□□□ -1.21
ATG4A-208ENST00000489247 RC3H1Q5TC82 1133 aaKnown RBP7.51□□□□□ -1.21
ATG4A-208ENST00000489247 NLRP13Q86W25 1043 aa7.51□□□□□ -1.21
ATG4A-208ENST00000489247 BANK1Q8NDB2 785 aa7.51□□□□□ -1.21
ATG4A-208ENST00000489247 PNISRQ8TF01 805 aaKnown RBP7.51□□□□□ -1.21
ATG4A-208ENST00000489247 FOXJ1Q92949 421 aa7.51□□□□□ -1.21
ATG4A-208ENST00000489247 TRIM47Q96LD4 638 aa7.51□□□□□ -1.21
ATG4A-208ENST00000489247 PANK3Q9H999 370 aa7.51□□□□□ -1.21
ATG4A-208ENST00000489247 TOR4AQ9NXH8 423 aa7.51□□□□□ -1.21
ATG4A-208ENST00000489247 DLC1Q96QB1 1528 aa7.51□□□□□ -1.21
ATG4A-208ENST00000489247 WNT7BP56706 349 aa7.5□□□□□ -1.21
ATG4A-208ENST00000489247 C4orf48Q5BLP8 95 aa7.5□□□□□ -1.21
ATG4A-208ENST00000489247 POM121Q96HA1 1249 aa7.5□□□□□ -1.21
ATG4A-208ENST00000489247 ATP13A2Q9NQ11 1180 aa7.5□□□□□ -1.21
ATG4A-208ENST00000489247 MYOM1P52179 1685 aa7.5□□□□□ -1.21
ATG4A-208ENST00000489247 CLTCQ00610 1675 aaKnown RBP7.5□□□□□ -1.21
ATG4A-208ENST00000489247 NINLQ9Y2I6 1382 aa7.49□□□□□ -1.21
ATG4A-208ENST00000489247 XP32Q5T750 250 aa7.49□□□□□ -1.21
ATG4A-208ENST00000489247 MRGPRX2Q96LB1 330 aa7.49□□□□□ -1.21
ATG4A-208ENST00000489247 FKBPLQ9UIM3 349 aa7.49□□□□□ -1.21
ATG4A-208ENST00000489247 PTPRMP28827 1452 aa7.49□□□□□ -1.21
ATG4A-208ENST00000489247 NLRP1Q9C000 1473 aa7.49□□□□□ -1.21
ATG4A-208ENST00000489247 TNRQ92752 1358 aa7.48□□□□□ -1.21
ATG4A-208ENST00000489247 WNT7AO00755 349 aa7.48□□□□□ -1.21
ATG4A-208ENST00000489247 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.48□□□□□ -1.21
ATG4A-208ENST00000489247 POLR3GLQ9BT43 218 aa7.48□□□□□ -1.21
ATG4A-208ENST00000489247 YTHDC2Q9H6S0 1430 aaKnown RBP7.48□□□□□ -1.21
ATG4A-208ENST00000489247 SENP2Q9HC62 589 aa7.48□□□□□ -1.21
ATG4A-208ENST00000489247 RIMS2Q9UQ26 1411 aa7.48□□□□□ -1.21
ATG4A-208ENST00000489247 ALKQ9UM73 1620 aa7.48□□□□□ -1.21
ATG4A-208ENST00000489247 TULP4Q9NRJ4 1543 aa7.47□□□□□ -1.21
ATG4A-208ENST00000489247 ABCC11Q96J66 1382 aa7.47□□□□□ -1.21
ATG4A-208ENST00000489247 TECPR2O15040 1411 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms