RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 KCNQ3O43525 872 aa16.18■□□□□ 0.18
COL4A5-206ENST00000489230 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
COL4A5-206ENST00000489230 DNAJC10Q8IXB1 793 aa16.18■□□□□ 0.18
COL4A5-206ENST00000489230 LINC00116Q8NCU8 138 aa16.18■□□□□ 0.18
COL4A5-206ENST00000489230 RTCBQ9Y3I0 505 aaKnown RBP16.18■□□□□ 0.18
COL4A5-206ENST00000489230 CNTNAP4Q9C0A0 1308 aa16.18■□□□□ 0.18
COL4A5-206ENST00000489230 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
COL4A5-206ENST00000489230 ZNF853P0CG23 659 aa16.17■□□□□ 0.18
COL4A5-206ENST00000489230 CYP19A1P11511 503 aaPredicted RBP16.17■□□□□ 0.18
COL4A5-206ENST00000489230 SALL2Q9Y467 1007 aaPredicted RBP16.17■□□□□ 0.18
COL4A5-206ENST00000489230 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
COL4A5-206ENST00000489230 RPS6KA4O75676 772 aa16.16■□□□□ 0.18
COL4A5-206ENST00000489230 ADRA2BP18089 450 aa16.16■□□□□ 0.18
COL4A5-206ENST00000489230 SSFA2P28290 1259 aa16.16■□□□□ 0.18
COL4A5-206ENST00000489230 TRAPPC3LQ5T215 181 aa16.16■□□□□ 0.18
COL4A5-206ENST00000489230 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
COL4A5-206ENST00000489230 NLGN2Q8NFZ4 835 aa16.16■□□□□ 0.18
COL4A5-206ENST00000489230 CCDC87Q9NVE4 849 aa16.16■□□□□ 0.18
COL4A5-206ENST00000489230 ZNF831Q5JPB2 1677 aa16.15■□□□□ 0.18
COL4A5-206ENST00000489230 GNPATO15228 680 aa16.15■□□□□ 0.18
COL4A5-206ENST00000489230 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
COL4A5-206ENST00000489230 GOLGB1Q14789 3259 aaKnown RBP16.14■□□□□ 0.18
COL4A5-206ENST00000489230 SIPA1L3O60292 1781 aaPredicted RBP16.14■□□□□ 0.17
COL4A5-206ENST00000489230 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
COL4A5-206ENST00000489230 VIRMAQ69YN4 1812 aaKnown RBP16.14■□□□□ 0.17
COL4A5-206ENST00000489230 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
COL4A5-206ENST00000489230 TUBGCP6Q96RT7 1819 aa16.13■□□□□ 0.17
COL4A5-206ENST00000489230 A0A087WZG4 1122 aa16.13■□□□□ 0.17
COL4A5-206ENST00000489230 HOXB7P09629 217 aa16.13■□□□□ 0.17
COL4A5-206ENST00000489230 INTS5Q6P9B9 1019 aaKnown RBP16.13■□□□□ 0.17
COL4A5-206ENST00000489230 MYH16Q9H6N6 1097 aa16.13■□□□□ 0.17
COL4A5-206ENST00000489230 USP16Q9Y5T5 823 aa16.13■□□□□ 0.17
COL4A5-206ENST00000489230 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
COL4A5-206ENST00000489230 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
COL4A5-206ENST00000489230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.12■□□□□ 0.17
COL4A5-206ENST00000489230 RFC4P35249 363 aa16.12■□□□□ 0.17
COL4A5-206ENST00000489230 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
COL4A5-206ENST00000489230 IL6STP40189 918 aaPredicted RBP16.11■□□□□ 0.17
COL4A5-206ENST00000489230 COL23A1Q86Y22 540 aaPredicted RBP16.11■□□□□ 0.17
COL4A5-206ENST00000489230 YBX3P16989 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL4A5-206ENST00000489230 CANXP27824 592 aaKnown RBP16.1■□□□□ 0.17
COL4A5-206ENST00000489230 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
COL4A5-206ENST00000489230 IFFO2Q5TF58 517 aa16.09■□□□□ 0.17
COL4A5-206ENST00000489230 ARHGEF1Q92888 912 aaKnown RBP16.09■□□□□ 0.17
COL4A5-206ENST00000489230 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
COL4A5-206ENST00000489230 C5P01031 1676 aa16.08■□□□□ 0.17
COL4A5-206ENST00000489230 C4BP0C0L5 1744 aa16.08■□□□□ 0.17
COL4A5-206ENST00000489230 UBR2Q8IWV8 1755 aa16.08■□□□□ 0.17
COL4A5-206ENST00000489230 E9PSI1 815 aa16.08■□□□□ 0.16
COL4A5-206ENST00000489230 ZPR1O75312 459 aa16.08■□□□□ 0.16
COL4A5-206ENST00000489230 PHF14O94880 888 aa16.08■□□□□ 0.16
COL4A5-206ENST00000489230 A1BGP04217 495 aa16.08■□□□□ 0.16
COL4A5-206ENST00000489230 EIF5P55010 431 aaKnown RBP16.08■□□□□ 0.16
COL4A5-206ENST00000489230 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.16
COL4A5-206ENST00000489230 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.16
COL4A5-206ENST00000489230 ZNF521Q96K83 1311 aa16.08■□□□□ 0.16
COL4A5-206ENST00000489230 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
COL4A5-206ENST00000489230 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
COL4A5-206ENST00000489230 ZBTB1Q9Y2K1 713 aa16.07■□□□□ 0.16
COL4A5-206ENST00000489230 TAF1LQ8IZX4 1826 aa16.07■□□□□ 0.16
COL4A5-206ENST00000489230 CICQ96RK0 1608 aaPredicted RBP16.06■□□□□ 0.16
COL4A5-206ENST00000489230 ATP10DQ9P241 1426 aa16.06■□□□□ 0.16
COL4A5-206ENST00000489230 HNRNPUQ00839 825 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL4A5-206ENST00000489230 HDGFL1Q5TGJ6 251 aa16.05■□□□□ 0.16
COL4A5-206ENST00000489230 CCDC30Q5VVM6 783 aa16.05■□□□□ 0.16
COL4A5-206ENST00000489230 TSR2Q969E8 191 aaKnown RBP16.05■□□□□ 0.16
COL4A5-206ENST00000489230 GPBP1L1Q9HC44 474 aaPredicted RBP16.05■□□□□ 0.16
COL4A5-206ENST00000489230 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
COL4A5-206ENST00000489230 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
COL4A5-206ENST00000489230 CD2APQ9Y5K6 639 aa16.05■□□□□ 0.16
COL4A5-206ENST00000489230 KDM3BQ7LBC6 1761 aa16.05■□□□□ 0.16
COL4A5-206ENST00000489230 RGL2O15211 777 aa16.04■□□□□ 0.16
COL4A5-206ENST00000489230 SLFN5Q08AF3 891 aa16.04■□□□□ 0.16
COL4A5-206ENST00000489230 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
COL4A5-206ENST00000489230 FANCIQ9NVI1 1328 aa16.03■□□□□ 0.16
COL4A5-206ENST00000489230 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
COL4A5-206ENST00000489230 ELL2O00472 640 aaPredicted RBP16.03■□□□□ 0.16
COL4A5-206ENST00000489230 TWISTNBQ3B726 338 aaPredicted RBP16.03■□□□□ 0.16
COL4A5-206ENST00000489230 NBPF10Q6P3W6 841 aaKnown RBP16.03■□□□□ 0.16
COL4A5-206ENST00000489230 NBPF15Q8N660 670 aa16.03■□□□□ 0.16
COL4A5-206ENST00000489230 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL4A5-206ENST00000489230 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
COL4A5-206ENST00000489230 ZNF330Q9Y3S2 320 aaPredicted RBP16.03■□□□□ 0.16
COL4A5-206ENST00000489230 COL5A3P25940 1745 aaPredicted RBP16.02■□□□□ 0.16
COL4A5-206ENST00000489230 TJP1Q07157 1748 aa16.02■□□□□ 0.16
COL4A5-206ENST00000489230 KRT24Q2M2I5 525 aa16.02■□□□□ 0.16
COL4A5-206ENST00000489230 CLEC4GQ6UXB4 293 aa16.02■□□□□ 0.16
COL4A5-206ENST00000489230 AMIGO3Q86WK7 504 aa16.02■□□□□ 0.16
COL4A5-206ENST00000489230 COL15A1P39059 1388 aa16.01■□□□□ 0.15
COL4A5-206ENST00000489230 USP42Q9H9J4 1324 aaKnown RBP16.01■□□□□ 0.15
COL4A5-206ENST00000489230 MYL6BP14649 208 aa16.01■□□□□ 0.15
COL4A5-206ENST00000489230 EXOSC9Q06265 439 aaKnown RBP16.01■□□□□ 0.15
COL4A5-206ENST00000489230 DZIP3Q86Y13 1208 aaKnown RBP16.01■□□□□ 0.15
COL4A5-206ENST00000489230 ZNF526Q8TF50 670 aaPredicted RBP16.01■□□□□ 0.15
COL4A5-206ENST00000489230 STK31Q9BXU1 1019 aa16.01■□□□□ 0.15
COL4A5-206ENST00000489230 SPINK5Q9NQ38 1064 aaPredicted RBP16.01■□□□□ 0.15
COL4A5-206ENST00000489230 ZNF652Q9Y2D9 606 aa16.01■□□□□ 0.15
COL4A5-206ENST00000489230 ERVV-1B6SEH8 477 aa16■□□□□ 0.15
COL4A5-206ENST00000489230 GYS1P13807 737 aa16■□□□□ 0.15
COL4A5-206ENST00000489230 PDIA6Q15084 440 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms