RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
SFXN5-219ENST00000488839 CD2APQ9Y5K6 639 aa16.49■□□□□ 0.23
SFXN5-219ENST00000488839 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
SFXN5-219ENST00000488839 HTATSF1O43719 755 aaKnown RBP16.48■□□□□ 0.23
SFXN5-219ENST00000488839 PHF14O94880 888 aa16.48■□□□□ 0.23
SFXN5-219ENST00000488839 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
SFXN5-219ENST00000488839 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
SFXN5-219ENST00000488839 TEFQ10587 303 aa16.47■□□□□ 0.23
SFXN5-219ENST00000488839 AMIGO3Q86WK7 504 aa16.47■□□□□ 0.23
SFXN5-219ENST00000488839 IL17REQ8NFR9 667 aa16.47■□□□□ 0.23
SFXN5-219ENST00000488839 CEMIPQ8WUJ3 1361 aa16.47■□□□□ 0.23
SFXN5-219ENST00000488839 NEFMP07197 916 aa16.46■□□□□ 0.23
SFXN5-219ENST00000488839 PHACTR3Q96KR7 559 aa16.46■□□□□ 0.23
SFXN5-219ENST00000488839 RFC4P35249 363 aa16.45■□□□□ 0.22
SFXN5-219ENST00000488839 TTC5Q8N0Z6 440 aa16.45■□□□□ 0.22
SFXN5-219ENST00000488839 ARHGEF1Q92888 912 aaKnown RBP16.45■□□□□ 0.22
SFXN5-219ENST00000488839 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
SFXN5-219ENST00000488839 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
SFXN5-219ENST00000488839 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
SFXN5-219ENST00000488839 MSL1Q68DK7 614 aa16.44■□□□□ 0.22
SFXN5-219ENST00000488839 RTF1Q92541 710 aaKnown RBP16.44■□□□□ 0.22
SFXN5-219ENST00000488839 VIRMAQ69YN4 1812 aaKnown RBP16.44■□□□□ 0.22
SFXN5-219ENST00000488839 SLC39A6Q13433 755 aa16.43■□□□□ 0.22
SFXN5-219ENST00000488839 ZNF790Q6PG37 636 aa16.43■□□□□ 0.22
SFXN5-219ENST00000488839 KCPQ6ZWJ8 1503 aa16.42■□□□□ 0.22
SFXN5-219ENST00000488839 CYP19A1P11511 503 aaPredicted RBP16.42■□□□□ 0.22
SFXN5-219ENST00000488839 INTS5Q6P9B9 1019 aaKnown RBP16.42■□□□□ 0.22
SFXN5-219ENST00000488839 DNAJC10Q8IXB1 793 aa16.42■□□□□ 0.22
SFXN5-219ENST00000488839 CCDC87Q9NVE4 849 aa16.42■□□□□ 0.22
SFXN5-219ENST00000488839 TJP1Q07157 1748 aa16.42■□□□□ 0.22
SFXN5-219ENST00000488839 STARD3NLO95772 234 aa16.41■□□□□ 0.22
SFXN5-219ENST00000488839 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
SFXN5-219ENST00000488839 MYH14Q7Z406 1995 aaKnown RBP16.4■□□□□ 0.22
SFXN5-219ENST00000488839 BTBD11A6QL63 1104 aa16.4■□□□□ 0.22
SFXN5-219ENST00000488839 GRIN3BO60391 1043 aa16.4■□□□□ 0.22
SFXN5-219ENST00000488839 GYS1P13807 737 aa16.4■□□□□ 0.22
SFXN5-219ENST00000488839 YY1P25490 414 aa16.4■□□□□ 0.22
SFXN5-219ENST00000488839 GPR162Q16538 588 aa16.4■□□□□ 0.22
SFXN5-219ENST00000488839 SMIM5Q71RC9 77 aa16.4■□□□□ 0.22
SFXN5-219ENST00000488839 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
SFXN5-219ENST00000488839 PLSCR2Q9NRY7 297 aa16.4■□□□□ 0.22
SFXN5-219ENST00000488839 UBR2Q8IWV8 1755 aa16.4■□□□□ 0.22
SFXN5-219ENST00000488839 MYBBP1AQ9BQG0 1328 aaKnown RBP16.4■□□□□ 0.22
SFXN5-219ENST00000488839 SIPA1L3O60292 1781 aaPredicted RBP16.39■□□□□ 0.21
SFXN5-219ENST00000488839 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
SFXN5-219ENST00000488839 PLEKHF1Q96S99 279 aa16.39■□□□□ 0.21
SFXN5-219ENST00000488839 SOS1Q07889 1333 aaPredicted RBP16.39■□□□□ 0.21
SFXN5-219ENST00000488839 HEG1Q9ULI3 1381 aa16.38■□□□□ 0.21
SFXN5-219ENST00000488839 MMP10P09238 476 aa16.38■□□□□ 0.21
SFXN5-219ENST00000488839 NLGN2Q8NFZ4 835 aa16.38■□□□□ 0.21
SFXN5-219ENST00000488839 ZNF496Q96IT1 587 aaPredicted RBP16.38■□□□□ 0.21
SFXN5-219ENST00000488839 USP42Q9H9J4 1324 aaKnown RBP16.38■□□□□ 0.21
SFXN5-219ENST00000488839 A0A087WZG4 1122 aa16.37■□□□□ 0.21
SFXN5-219ENST00000488839 ZPR1O75312 459 aa16.37■□□□□ 0.21
SFXN5-219ENST00000488839 TGFB2P61812 414 aa16.37■□□□□ 0.21
SFXN5-219ENST00000488839 PARP3Q9Y6F1 533 aa16.37■□□□□ 0.21
SFXN5-219ENST00000488839 TAF7Q15545 349 aaPredicted RBP16.36■□□□□ 0.21
SFXN5-219ENST00000488839 PNISRQ8TF01 805 aaKnown RBP16.36■□□□□ 0.21
SFXN5-219ENST00000488839 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
SFXN5-219ENST00000488839 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
SFXN5-219ENST00000488839 MAPK8IP3Q9UPT6 1336 aa16.36■□□□□ 0.21
SFXN5-219ENST00000488839 EIF5P55010 431 aaKnown RBP16.35■□□□□ 0.21
SFXN5-219ENST00000488839 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
SFXN5-219ENST00000488839 C4AP0C0L4 1744 aa16.34■□□□□ 0.21
SFXN5-219ENST00000488839 IL6STP40189 918 aaPredicted RBP16.34■□□□□ 0.21
SFXN5-219ENST00000488839 MCM10Q7L590 875 aa16.34■□□□□ 0.21
SFXN5-219ENST00000488839 PHF12Q96QT6 1004 aa16.34■□□□□ 0.21
SFXN5-219ENST00000488839 ZBTB1Q9Y2K1 713 aa16.34■□□□□ 0.21
SFXN5-219ENST00000488839 SNRPA1P09661 255 aaKnown RBP16.33■□□□□ 0.2
SFXN5-219ENST00000488839 TM4SF1P30408 202 aa16.33■□□□□ 0.2
SFXN5-219ENST00000488839 PRKRIP1Q9H875 184 aaPredicted RBP16.33■□□□□ 0.2
SFXN5-219ENST00000488839 COL15A1P39059 1388 aa16.33■□□□□ 0.2
SFXN5-219ENST00000488839 FKBP8Q14318 412 aa16.32■□□□□ 0.2
SFXN5-219ENST00000488839 NPM2Q86SE8 214 aaKnown RBP16.32■□□□□ 0.2
SFXN5-219ENST00000488839 CHD4Q14839 1912 aa16.31■□□□□ 0.2
SFXN5-219ENST00000488839 CANXP27824 592 aaKnown RBP16.31■□□□□ 0.2
SFXN5-219ENST00000488839 USPL1Q5W0Q7 1092 aa16.31■□□□□ 0.2
SFXN5-219ENST00000488839 BABAM1Q9NWV8 329 aa16.31■□□□□ 0.2
SFXN5-219ENST00000488839 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
SFXN5-219ENST00000488839 KIF13BQ9NQT8 1826 aa16.31■□□□□ 0.2
SFXN5-219ENST00000488839 C10orf71Q711Q0 1435 aa16.3■□□□□ 0.2
SFXN5-219ENST00000488839 POTEB2H3BUK9 544 aa16.3■□□□□ 0.2
SFXN5-219ENST00000488839 RGL2O15211 777 aa16.3■□□□□ 0.2
SFXN5-219ENST00000488839 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
SFXN5-219ENST00000488839 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
SFXN5-219ENST00000488839 PELP1Q8IZL8 1130 aaKnown RBP16.3■□□□□ 0.2
SFXN5-219ENST00000488839 KCNQ3O43525 872 aa16.29■□□□□ 0.2
SFXN5-219ENST00000488839 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
SFXN5-219ENST00000488839 POLRMTO00411 1230 aaKnown RBP16.28■□□□□ 0.2
SFXN5-219ENST00000488839 WDR43Q15061 677 aaKnown RBP eCLIP16.28■□□□□ 0.2
SFXN5-219ENST00000488839 USP16Q9Y5T5 823 aa16.28■□□□□ 0.2
SFXN5-219ENST00000488839 A1BGP04217 495 aa16.27■□□□□ 0.2
SFXN5-219ENST00000488839 RIPK4P57078 832 aa16.27■□□□□ 0.2
SFXN5-219ENST00000488839 DDR1Q08345 913 aa16.27■□□□□ 0.2
SFXN5-219ENST00000488839 BCL2L12Q9HB09 334 aa16.27■□□□□ 0.2
SFXN5-219ENST00000488839 DLG5Q8TDM6 1919 aa16.26■□□□□ 0.19
SFXN5-219ENST00000488839 TMPOP42166 694 aaKnown RBP16.26■□□□□ 0.19
SFXN5-219ENST00000488839 NFIXQ14938 502 aa16.26■□□□□ 0.19
SFXN5-219ENST00000488839 RUNDC1Q96C34 613 aa16.26■□□□□ 0.19
SFXN5-219ENST00000488839 PXDNLA1KZ92 1463 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms