RNA–Protein interactions for RNA: ENST00000488685.1

SH2D3C-212, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best)

Gene SH2D3C, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-212ENST00000488685 C4AP0C0L4 1744 aa18.17■□□□□ 0.5
SH2D3C-212ENST00000488685 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
SH2D3C-212ENST00000488685 PNISRQ8TF01 805 aaKnown RBP18.16■□□□□ 0.5
SH2D3C-212ENST00000488685 RUNDC1Q96C34 613 aa18.16■□□□□ 0.5
SH2D3C-212ENST00000488685 USP42Q9H9J4 1324 aaKnown RBP18.16■□□□□ 0.5
SH2D3C-212ENST00000488685 MMP10P09238 476 aa18.15■□□□□ 0.5
SH2D3C-212ENST00000488685 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
SH2D3C-212ENST00000488685 SNRPA1P09661 255 aaKnown RBP18.14■□□□□ 0.49
SH2D3C-212ENST00000488685 CANXP27824 592 aaKnown RBP18.14■□□□□ 0.49
SH2D3C-212ENST00000488685 EIF5P55010 431 aaKnown RBP18.14■□□□□ 0.49
SH2D3C-212ENST00000488685 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.49
SH2D3C-212ENST00000488685 MIS18AQ9NYP9 233 aa18.14■□□□□ 0.49
SH2D3C-212ENST00000488685 SRP68Q9UHB9 627 aaKnown RBP18.14■□□□□ 0.49
SH2D3C-212ENST00000488685 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
SH2D3C-212ENST00000488685 ZPR1O75312 459 aa18.13■□□□□ 0.49
SH2D3C-212ENST00000488685 LMOD3Q0VAK6 560 aa18.13■□□□□ 0.49
SH2D3C-212ENST00000488685 NLGN2Q8NFZ4 835 aa18.13■□□□□ 0.49
SH2D3C-212ENST00000488685 NARFQ9UHQ1 456 aa18.13■□□□□ 0.49
SH2D3C-212ENST00000488685 IL6STP40189 918 aaPredicted RBP18.12■□□□□ 0.49
SH2D3C-212ENST00000488685 FKBP8Q14318 412 aa18.12■□□□□ 0.49
SH2D3C-212ENST00000488685 COL15A1P39059 1388 aa18.12■□□□□ 0.49
SH2D3C-212ENST00000488685 A0A087WZG4 1122 aa18.11■□□□□ 0.49
SH2D3C-212ENST00000488685 PRAMEF22A3QJZ6 481 aa18.11■□□□□ 0.49
SH2D3C-212ENST00000488685 ANP32CO43423 234 aa18.11■□□□□ 0.49
SH2D3C-212ENST00000488685 A1BGP04217 495 aa18.11■□□□□ 0.49
SH2D3C-212ENST00000488685 USPL1Q5W0Q7 1092 aa18.11■□□□□ 0.49
SH2D3C-212ENST00000488685 KDM3BQ7LBC6 1761 aa18.1■□□□□ 0.49
SH2D3C-212ENST00000488685 TM4SF1P30408 202 aa18.1■□□□□ 0.49
SH2D3C-212ENST00000488685 EIF4A1P60842 406 aaKnown RBP18.1■□□□□ 0.49
SH2D3C-212ENST00000488685 CCDC184Q52MB2 194 aa18.1■□□□□ 0.49
SH2D3C-212ENST00000488685 BABAM1Q9NWV8 329 aa18.1■□□□□ 0.49
SH2D3C-212ENST00000488685 RRP7AQ9Y3A4 280 aaKnown RBP18.1■□□□□ 0.49
SH2D3C-212ENST00000488685 PARP3Q9Y6F1 533 aa18.1■□□□□ 0.49
SH2D3C-212ENST00000488685 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
SH2D3C-212ENST00000488685 TRIM35Q9UPQ4 493 aa18.09■□□□□ 0.49
SH2D3C-212ENST00000488685 GIGYF1O75420 1035 aaPredicted RBP18.08■□□□□ 0.48
SH2D3C-212ENST00000488685 BCL2L12Q9HB09 334 aa18.08■□□□□ 0.48
SH2D3C-212ENST00000488685 GPR162Q16538 588 aa18.07■□□□□ 0.48
SH2D3C-212ENST00000488685 TGFB2P61812 414 aa18.06■□□□□ 0.48
SH2D3C-212ENST00000488685 DDR1Q08345 913 aa18.06■□□□□ 0.48
SH2D3C-212ENST00000488685 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
SH2D3C-212ENST00000488685 TSPYL4Q9UJ04 414 aa18.06■□□□□ 0.48
SH2D3C-212ENST00000488685 KIF13BQ9NQT8 1826 aa18.06■□□□□ 0.48
SH2D3C-212ENST00000488685 POLRMTO00411 1230 aaKnown RBP18.05■□□□□ 0.48
SH2D3C-212ENST00000488685 APAF1O14727 1248 aa18.05■□□□□ 0.48
SH2D3C-212ENST00000488685 NFIXQ14938 502 aa18.05■□□□□ 0.48
SH2D3C-212ENST00000488685 TBC1D2BQ9UPU7 963 aa18.05■□□□□ 0.48
SH2D3C-212ENST00000488685 NBPF26B4DH59 902 aa18.04■□□□□ 0.48
SH2D3C-212ENST00000488685 NBPF10Q6P3W6 841 aaKnown RBP18.04■□□□□ 0.48
SH2D3C-212ENST00000488685 NBPF15Q8N660 670 aa18.04■□□□□ 0.48
SH2D3C-212ENST00000488685 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
SH2D3C-212ENST00000488685 C10orf71Q711Q0 1435 aa18.04■□□□□ 0.48
SH2D3C-212ENST00000488685 CHL1O00533 1208 aa18.03■□□□□ 0.48
SH2D3C-212ENST00000488685 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
SH2D3C-212ENST00000488685 PELP1Q8IZL8 1130 aaKnown RBP18.03■□□□□ 0.48
SH2D3C-212ENST00000488685 LAMB4A4D0S4 1761 aa18.02■□□□□ 0.48
SH2D3C-212ENST00000488685 GRIN3BO60391 1043 aa18.02■□□□□ 0.48
SH2D3C-212ENST00000488685 CAMTA2O94983 1202 aa18.02■□□□□ 0.48
SH2D3C-212ENST00000488685 YBX3P16989 372 aaKnown RBP eCLIP18.02■□□□□ 0.48
SH2D3C-212ENST00000488685 DZIP3Q86Y13 1208 aaKnown RBP18.02■□□□□ 0.48
SH2D3C-212ENST00000488685 MRS2Q9HD23 443 aa18.02■□□□□ 0.48
SH2D3C-212ENST00000488685 RGL2O15211 777 aa18■□□□□ 0.47
SH2D3C-212ENST00000488685 SERPINB2P05120 415 aa18■□□□□ 0.47
SH2D3C-212ENST00000488685 YY1P25490 414 aa18■□□□□ 0.47
SH2D3C-212ENST00000488685 TBC1D9BQ66K14 1250 aa18■□□□□ 0.47
SH2D3C-212ENST00000488685 KIAA1551Q9HCM1 1747 aa18■□□□□ 0.47
SH2D3C-212ENST00000488685 PXDNLA1KZ92 1463 aa18■□□□□ 0.47
SH2D3C-212ENST00000488685 SCN7AQ01118 1682 aa17.99■□□□□ 0.47
SH2D3C-212ENST00000488685 NRXN2Q9P2S2 1712 aa17.99■□□□□ 0.47
SH2D3C-212ENST00000488685 A0A0G2JLW4 131 aa17.99■□□□□ 0.47
SH2D3C-212ENST00000488685 CLEC4GQ6UXB4 293 aa17.99■□□□□ 0.47
SH2D3C-212ENST00000488685 CFAP44Q96MT7 982 aa17.99■□□□□ 0.47
SH2D3C-212ENST00000488685 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
SH2D3C-212ENST00000488685 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
SH2D3C-212ENST00000488685 DPEP1P16444 411 aa17.98■□□□□ 0.47
SH2D3C-212ENST00000488685 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
SH2D3C-212ENST00000488685 LAS1LQ9Y4W2 734 aaKnown RBP17.98■□□□□ 0.47
SH2D3C-212ENST00000488685 BCORQ6W2J9 1755 aa17.97■□□□□ 0.47
SH2D3C-212ENST00000488685 N4BP2Q86UW6 1770 aaPredicted RBP17.97■□□□□ 0.47
SH2D3C-212ENST00000488685 ZNF853P0CG23 659 aa17.97■□□□□ 0.47
SH2D3C-212ENST00000488685 KCNA3P22001 575 aa17.97■□□□□ 0.47
SH2D3C-212ENST00000488685 CALD1Q05682 793 aaKnown RBP17.97■□□□□ 0.47
SH2D3C-212ENST00000488685 SETDB2Q96T68 719 aa17.97■□□□□ 0.47
SH2D3C-212ENST00000488685 CHD4Q14839 1912 aa17.97■□□□□ 0.47
SH2D3C-212ENST00000488685 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
SH2D3C-212ENST00000488685 ZNF652Q9Y2D9 606 aa17.96■□□□□ 0.47
SH2D3C-212ENST00000488685 CARMIL3Q8ND23 1372 aa17.95■□□□□ 0.46
SH2D3C-212ENST00000488685 ERVV-1B6SEH8 477 aa17.94■□□□□ 0.46
SH2D3C-212ENST00000488685 MYL6BP14649 208 aa17.94■□□□□ 0.46
SH2D3C-212ENST00000488685 EIF2S2P20042 333 aaKnown RBP17.94■□□□□ 0.46
SH2D3C-212ENST00000488685 PDIA6Q15084 440 aa17.94■□□□□ 0.46
SH2D3C-212ENST00000488685 CCDC27Q2M243 656 aa17.94■□□□□ 0.46
SH2D3C-212ENST00000488685 NGEFQ8N5V2 710 aa17.94■□□□□ 0.46
SH2D3C-212ENST00000488685 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
SH2D3C-212ENST00000488685 IFT57Q9NWB7 429 aa17.94■□□□□ 0.46
SH2D3C-212ENST00000488685 PIM2Q9P1W9 311 aa17.94■□□□□ 0.46
SH2D3C-212ENST00000488685 WWC3Q9ULE0 1092 aa17.94■□□□□ 0.46
SH2D3C-212ENST00000488685 HOXB7P09629 217 aa17.93■□□□□ 0.46
SH2D3C-212ENST00000488685 GNAI1P63096 354 aa17.93■□□□□ 0.46
SH2D3C-212ENST00000488685 HLFQ16534 295 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms