RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 DKK1O94907 266 aa9.58□□□□□ -0.88
VPS8-224ENST00000488255 TSPAN10Q9H1Z9 355 aaPredicted RBP9.58□□□□□ -0.88
VPS8-224ENST00000488255 VSIG8P0DPA2 414 aa9.57□□□□□ -0.88
VPS8-224ENST00000488255 EPHA4P54764 986 aa9.57□□□□□ -0.88
VPS8-224ENST00000488255 TRIM22Q8IYM9 498 aa9.57□□□□□ -0.88
VPS8-224ENST00000488255 GAS2L2Q8NHY3 880 aa9.57□□□□□ -0.88
VPS8-224ENST00000488255 GTPBP3Q969Y2 492 aaKnown RBP9.57□□□□□ -0.88
VPS8-224ENST00000488255 ZNF837Q96EG3 531 aaPredicted RBP9.57□□□□□ -0.88
VPS8-224ENST00000488255 H7C1W4 665 aa9.56□□□□□ -0.88
VPS8-224ENST00000488255 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
VPS8-224ENST00000488255 ERICH6Q7L0X2 663 aa9.56□□□□□ -0.88
VPS8-224ENST00000488255 PGBD3Q8N328 593 aa9.56□□□□□ -0.88
VPS8-224ENST00000488255 CHMP7Q8WUX9 453 aaPredicted RBP9.56□□□□□ -0.88
VPS8-224ENST00000488255 NANOS1Q8WY41 292 aaKnown RBP9.56□□□□□ -0.88
VPS8-224ENST00000488255 NUCKS1Q9H1E3 243 aaKnown RBP9.56□□□□□ -0.88
VPS8-224ENST00000488255 FOXK2Q01167 660 aa9.55□□□□□ -0.88
VPS8-224ENST00000488255 ARSJQ5FYB0 599 aaPredicted RBP9.55□□□□□ -0.88
VPS8-224ENST00000488255 ZDHHC1Q8WTX9 485 aa9.55□□□□□ -0.88
VPS8-224ENST00000488255 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
VPS8-224ENST00000488255 CNTNAP3BQ96NU0 1288 aa9.55□□□□□ -0.88
VPS8-224ENST00000488255 COL25A1Q9BXS0 654 aaPredicted RBP9.55□□□□□ -0.88
VPS8-224ENST00000488255 CNTNAP3Q9BZ76 1288 aa9.55□□□□□ -0.88
VPS8-224ENST00000488255 PPP1R12BO60237 982 aaPredicted RBP9.54□□□□□ -0.88
VPS8-224ENST00000488255 NBPF1Q3BBV0 1214 aa9.54□□□□□ -0.88
VPS8-224ENST00000488255 SH3PXD2AQ5TCZ1 1133 aa9.54□□□□□ -0.88
VPS8-224ENST00000488255 ZNF295-AS1Q8N0V1 137 aa9.54□□□□□ -0.88
VPS8-224ENST00000488255 FAM200AQ8TCP9 573 aa9.54□□□□□ -0.88
VPS8-224ENST00000488255 SCG3Q8WXD2 468 aaKnown RBP9.54□□□□□ -0.88
VPS8-224ENST00000488255 ARID3AQ99856 593 aa9.54□□□□□ -0.88
VPS8-224ENST00000488255 NOVA2Q9UNW9 492 aaKnown RBP9.54□□□□□ -0.88
VPS8-224ENST00000488255 M0R2N6 131 aa9.53□□□□□ -0.88
VPS8-224ENST00000488255 NOS2P35228 1153 aa9.53□□□□□ -0.88
VPS8-224ENST00000488255 TXLNAP40222 546 aa9.53□□□□□ -0.88
VPS8-224ENST00000488255 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
VPS8-224ENST00000488255 BICDL1Q6ZP65 573 aa9.53□□□□□ -0.88
VPS8-224ENST00000488255 ARXQ96QS3 562 aa9.53□□□□□ -0.88
VPS8-224ENST00000488255 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
VPS8-224ENST00000488255 SERTM1A2A2V5 107 aa9.52□□□□□ -0.89
VPS8-224ENST00000488255 TATP17735 454 aaPredicted RBP9.52□□□□□ -0.89
VPS8-224ENST00000488255 EFHC2Q5JST6 749 aa9.52□□□□□ -0.89
VPS8-224ENST00000488255 RNFT1Q5M7Z0 435 aa9.52□□□□□ -0.89
VPS8-224ENST00000488255 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
VPS8-224ENST00000488255 HCN4Q9Y3Q4 1203 aa9.52□□□□□ -0.89
VPS8-224ENST00000488255 WIPF1O43516 503 aa9.51□□□□□ -0.89
VPS8-224ENST00000488255 ATP4AP20648 1035 aa9.51□□□□□ -0.89
VPS8-224ENST00000488255 PSMA6P60900 246 aaKnown RBP9.51□□□□□ -0.89
VPS8-224ENST00000488255 KRT76Q01546 638 aa9.51□□□□□ -0.89
VPS8-224ENST00000488255 TEAD4Q15561 434 aa9.51□□□□□ -0.89
VPS8-224ENST00000488255 PBXIP1Q96AQ6 731 aa9.51□□□□□ -0.89
VPS8-224ENST00000488255 THBS1P07996 1170 aa9.5□□□□□ -0.89
VPS8-224ENST00000488255 STK32AQ8WU08 396 aa9.5□□□□□ -0.89
VPS8-224ENST00000488255 GMCL1Q96IK5 515 aa9.5□□□□□ -0.89
VPS8-224ENST00000488255 TRERF1Q96PN7 1200 aa9.5□□□□□ -0.89
VPS8-224ENST00000488255 GJA3Q9Y6H8 435 aa9.5□□□□□ -0.89
VPS8-224ENST00000488255 A0A1W2PNR3 127 aa9.49□□□□□ -0.89
VPS8-224ENST00000488255 C21orf2O43822 256 aa9.49□□□□□ -0.89
VPS8-224ENST00000488255 SRPK2P78362 688 aaKnown RBP9.49□□□□□ -0.89
VPS8-224ENST00000488255 NGLY1Q96IV0 654 aa9.49□□□□□ -0.89
VPS8-224ENST00000488255 ZMIZ1Q9ULJ6 1067 aa9.49□□□□□ -0.89
VPS8-224ENST00000488255 EML1O00423 815 aa9.48□□□□□ -0.89
VPS8-224ENST00000488255 GAS6Q14393 721 aa9.48□□□□□ -0.89
VPS8-224ENST00000488255 C1orf216Q8TAB5 229 aa9.48□□□□□ -0.89
VPS8-224ENST00000488255 ZDHHC3Q9NYG2 299 aa9.48□□□□□ -0.89
VPS8-224ENST00000488255 INSM1Q01101 510 aaPredicted RBP9.47□□□□□ -0.89
VPS8-224ENST00000488255 PRIMPOLQ96LW4 560 aa9.47□□□□□ -0.89
VPS8-224ENST00000488255 ZIC5Q96T25 663 aa9.47□□□□□ -0.89
VPS8-224ENST00000488255 CRISPLD1Q9H336 500 aa9.47□□□□□ -0.89
VPS8-224ENST00000488255 ATG7O95352 703 aa9.46□□□□□ -0.9
VPS8-224ENST00000488255 RHPN1Q8TCX5 695 aa9.46□□□□□ -0.9
VPS8-224ENST00000488255 ABHD17AQ96GS6 310 aa9.46□□□□□ -0.9
VPS8-224ENST00000488255 ZCCHC2Q9C0B9 1178 aaKnown RBP9.46□□□□□ -0.9
VPS8-224ENST00000488255 PHACTR1Q9C0D0 580 aa9.46□□□□□ -0.9
VPS8-224ENST00000488255 NEUROD4Q9HD90 331 aa9.46□□□□□ -0.9
VPS8-224ENST00000488255 PRMT3O60678 531 aa9.45□□□□□ -0.9
VPS8-224ENST00000488255 TMEM164Q5U3C3 297 aa9.45□□□□□ -0.9
VPS8-224ENST00000488255 LRRC69Q6ZNQ3 347 aa9.45□□□□□ -0.9
VPS8-224ENST00000488255 KLRG1Q96E93 195 aa9.45□□□□□ -0.9
VPS8-224ENST00000488255 DCDC2BA2VCK2 349 aa9.44□□□□□ -0.9
VPS8-224ENST00000488255 LBRQ14739 615 aaKnown RBP9.44□□□□□ -0.9
VPS8-224ENST00000488255 ZSCAN1Q8NBB4 408 aa9.44□□□□□ -0.9
VPS8-224ENST00000488255 C2orf49Q9BVC5 232 aaPredicted RBP9.44□□□□□ -0.9
VPS8-224ENST00000488255 PHF24Q9UPV7 400 aa9.44□□□□□ -0.9
VPS8-224ENST00000488255 ATXN7O15265 892 aaPredicted RBP9.43□□□□□ -0.9
VPS8-224ENST00000488255 BNIP3LO60238 219 aa9.43□□□□□ -0.9
VPS8-224ENST00000488255 MX2P20592 715 aa9.43□□□□□ -0.9
VPS8-224ENST00000488255 IGFBP4P22692 258 aa9.43□□□□□ -0.9
VPS8-224ENST00000488255 UBAP2LQ14157 1087 aaKnown RBP9.43□□□□□ -0.9
VPS8-224ENST00000488255 ELOAQ14241 798 aaKnown RBP9.43□□□□□ -0.9
VPS8-224ENST00000488255 FIGNL1Q6PIW4 674 aa9.43□□□□□ -0.9
VPS8-224ENST00000488255 NLRP8Q86W28 1048 aa9.43□□□□□ -0.9
VPS8-224ENST00000488255 ALDH16A1Q8IZ83 802 aa9.43□□□□□ -0.9
VPS8-224ENST00000488255 VTI1AQ96AJ9 217 aa9.43□□□□□ -0.9
VPS8-224ENST00000488255 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
VPS8-224ENST00000488255 KHNYNO15037 678 aaKnown RBP9.42□□□□□ -0.9
VPS8-224ENST00000488255 ADAMTS2O95450 1211 aa9.42□□□□□ -0.9
VPS8-224ENST00000488255 HSH2DQ96JZ2 352 aa9.42□□□□□ -0.9
VPS8-224ENST00000488255 MBIPQ9NS73 344 aa9.42□□□□□ -0.9
VPS8-224ENST00000488255 PCDHGC4Q9Y5F7 938 aa9.42□□□□□ -0.9
VPS8-224ENST00000488255 WEE1P30291 646 aa9.41□□□□□ -0.9
VPS8-224ENST00000488255 CFHR5Q9BXR6 569 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms