RNA–Protein interactions for RNA: ENST00000488061.5

PDE6B-211, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-211ENST00000488061 FMNL2Q96PY5 1086 aa23.71■■□□□ 1.39
PDE6B-211ENST00000488061 CD2APQ9Y5K6 639 aa23.71■■□□□ 1.39
PDE6B-211ENST00000488061 INTS5Q6P9B9 1019 aaKnown RBP23.7■■□□□ 1.38
PDE6B-211ENST00000488061 NLGN1Q8N2Q7 840 aa23.7■■□□□ 1.38
PDE6B-211ENST00000488061 ZNF526Q8TF50 670 aaPredicted RBP23.7■■□□□ 1.38
PDE6B-211ENST00000488061 ARHGEF1Q92888 912 aaKnown RBP23.7■■□□□ 1.38
PDE6B-211ENST00000488061 CCDC87Q9NVE4 849 aa23.7■■□□□ 1.38
PDE6B-211ENST00000488061 STARD3NLO95772 234 aa23.69■■□□□ 1.38
PDE6B-211ENST00000488061 RFC4P35249 363 aa23.68■■□□□ 1.38
PDE6B-211ENST00000488061 MCM10Q7L590 875 aa23.68■■□□□ 1.38
PDE6B-211ENST00000488061 PNISRQ8TF01 805 aaKnown RBP23.68■■□□□ 1.38
PDE6B-211ENST00000488061 ZNF496Q96IT1 587 aaPredicted RBP23.68■■□□□ 1.38
PDE6B-211ENST00000488061 WDR43Q15061 677 aaKnown RBP eCLIP23.67■■□□□ 1.38
PDE6B-211ENST00000488061 TAF7Q15545 349 aaPredicted RBP23.67■■□□□ 1.38
PDE6B-211ENST00000488061 SOS1Q07889 1333 aaPredicted RBP23.66■■□□□ 1.38
PDE6B-211ENST00000488061 LMOD3Q0VAK6 560 aa23.65■■□□□ 1.38
PDE6B-211ENST00000488061 KDM3BQ7LBC6 1761 aa23.64■■□□□ 1.37
PDE6B-211ENST00000488061 USP42Q9H9J4 1324 aaKnown RBP23.63■■□□□ 1.37
PDE6B-211ENST00000488061 GYS1P13807 737 aa23.63■■□□□ 1.37
PDE6B-211ENST00000488061 DCTN1Q14203 1278 aa23.63■■□□□ 1.37
PDE6B-211ENST00000488061 SMIM5Q71RC9 77 aa23.63■■□□□ 1.37
PDE6B-211ENST00000488061 RUNDC1Q96C34 613 aa23.63■■□□□ 1.37
PDE6B-211ENST00000488061 BABAM1Q9NWV8 329 aa23.62■■□□□ 1.37
PDE6B-211ENST00000488061 WWC3Q9ULE0 1092 aa23.62■■□□□ 1.37
PDE6B-211ENST00000488061 TMPOP42166 694 aaKnown RBP23.61■■□□□ 1.37
PDE6B-211ENST00000488061 ZBTB1Q9Y2K1 713 aa23.61■■□□□ 1.37
PDE6B-211ENST00000488061 COL15A1P39059 1388 aa23.61■■□□□ 1.37
PDE6B-211ENST00000488061 A0A087WZG4 1122 aa23.6■■□□□ 1.37
PDE6B-211ENST00000488061 KIF3CO14782 793 aa23.6■■□□□ 1.37
PDE6B-211ENST00000488061 SNRPA1P09661 255 aaKnown RBP23.6■■□□□ 1.37
PDE6B-211ENST00000488061 EIF5P55010 431 aaKnown RBP23.6■■□□□ 1.37
PDE6B-211ENST00000488061 ADAMTS8Q9UP79 889 aa23.6■■□□□ 1.37
PDE6B-211ENST00000488061 KIF13BQ9NQT8 1826 aa23.6■■□□□ 1.37
PDE6B-211ENST00000488061 IL6STP40189 918 aaPredicted RBP23.59■■□□□ 1.37
PDE6B-211ENST00000488061 RIPK4P57078 832 aa23.59■■□□□ 1.37
PDE6B-211ENST00000488061 NARFQ9UHQ1 456 aa23.59■■□□□ 1.37
PDE6B-211ENST00000488061 LAMB4A4D0S4 1761 aa23.58■■□□□ 1.37
PDE6B-211ENST00000488061 KCNQ3O43525 872 aa23.58■■□□□ 1.37
PDE6B-211ENST00000488061 MMP10P09238 476 aa23.58■■□□□ 1.37
PDE6B-211ENST00000488061 ZPR1O75312 459 aa23.57■■□□□ 1.36
PDE6B-211ENST00000488061 ANP32CO43423 234 aa23.56■■□□□ 1.36
PDE6B-211ENST00000488061 CANXP27824 592 aaKnown RBP23.54■■□□□ 1.36
PDE6B-211ENST00000488061 PARP3Q9Y6F1 533 aa23.54■■□□□ 1.36
PDE6B-211ENST00000488061 C10orf71Q711Q0 1435 aa23.53■■□□□ 1.36
PDE6B-211ENST00000488061 RGL2O15211 777 aa23.53■■□□□ 1.36
PDE6B-211ENST00000488061 TM4SF1P30408 202 aa23.53■■□□□ 1.36
PDE6B-211ENST00000488061 USP16Q9Y5T5 823 aa23.53■■□□□ 1.36
PDE6B-211ENST00000488061 SCN7AQ01118 1682 aa23.53■■□□□ 1.36
PDE6B-211ENST00000488061 EIF4A1P60842 406 aaKnown RBP23.52■■□□□ 1.36
PDE6B-211ENST00000488061 FKBP8Q14318 412 aa23.52■■□□□ 1.36
PDE6B-211ENST00000488061 USPL1Q5W0Q7 1092 aa23.52■■□□□ 1.36
PDE6B-211ENST00000488061 NPM2Q86SE8 214 aaKnown RBP23.52■■□□□ 1.36
PDE6B-211ENST00000488061 SRP68Q9UHB9 627 aaKnown RBP23.52■■□□□ 1.36
PDE6B-211ENST00000488061 TGFB2P61812 414 aa23.51■■□□□ 1.35
PDE6B-211ENST00000488061 CCDC146Q8IYE0 955 aa23.51■■□□□ 1.35
PDE6B-211ENST00000488061 A1BGP04217 495 aa23.5■■□□□ 1.35
PDE6B-211ENST00000488061 THUMPD2Q9BTF0 503 aaKnown RBP23.5■■□□□ 1.35
PDE6B-211ENST00000488061 NRXN2Q9P2S2 1712 aa23.5■■□□□ 1.35
PDE6B-211ENST00000488061 MIS18AQ9NYP9 233 aa23.49■■□□□ 1.35
PDE6B-211ENST00000488061 TRIM35Q9UPQ4 493 aa23.49■■□□□ 1.35
PDE6B-211ENST00000488061 BCORQ6W2J9 1755 aa23.49■■□□□ 1.35
PDE6B-211ENST00000488061 KIAA1551Q9HCM1 1747 aa23.48■■□□□ 1.35
PDE6B-211ENST00000488061 APLP1P51693 650 aa23.48■■□□□ 1.35
PDE6B-211ENST00000488061 DNAJC5GQ8N7S2 189 aa23.48■■□□□ 1.35
PDE6B-211ENST00000488061 BCL2L12Q9HB09 334 aa23.48■■□□□ 1.35
PDE6B-211ENST00000488061 TSPYL4Q9UJ04 414 aa23.48■■□□□ 1.35
PDE6B-211ENST00000488061 ERBB4Q15303 1308 aa23.48■■□□□ 1.35
PDE6B-211ENST00000488061 NCBP3Q53F19 620 aaKnown RBP23.47■■□□□ 1.35
PDE6B-211ENST00000488061 PRAMEF22A3QJZ6 481 aa23.46■■□□□ 1.35
PDE6B-211ENST00000488061 POLRMTO00411 1230 aaKnown RBP23.46■■□□□ 1.35
PDE6B-211ENST00000488061 DDR1Q08345 913 aa23.46■■□□□ 1.35
PDE6B-211ENST00000488061 PXDNLA1KZ92 1463 aa23.45■■□□□ 1.34
PDE6B-211ENST00000488061 CHL1O00533 1208 aa23.45■■□□□ 1.34
PDE6B-211ENST00000488061 CALD1Q05682 793 aaKnown RBP23.45■■□□□ 1.34
PDE6B-211ENST00000488061 NFIXQ14938 502 aa23.45■■□□□ 1.34
PDE6B-211ENST00000488061 CLEC4GQ6UXB4 293 aa23.45■■□□□ 1.34
PDE6B-211ENST00000488061 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.34
PDE6B-211ENST00000488061 NEUROD2Q15784 382 aa23.44■■□□□ 1.34
PDE6B-211ENST00000488061 AFDNP55196 1824 aaKnown RBP23.44■■□□□ 1.34
PDE6B-211ENST00000488061 N4BP2Q86UW6 1770 aaPredicted RBP23.43■■□□□ 1.34
PDE6B-211ENST00000488061 DZIP3Q86Y13 1208 aaKnown RBP23.43■■□□□ 1.34
PDE6B-211ENST00000488061 NBPF26B4DH59 902 aa23.42■■□□□ 1.34
PDE6B-211ENST00000488061 APAF1O14727 1248 aa23.42■■□□□ 1.34
PDE6B-211ENST00000488061 TOMM70O94826 608 aa23.42■■□□□ 1.34
PDE6B-211ENST00000488061 CAMTA2O94983 1202 aa23.42■■□□□ 1.34
PDE6B-211ENST00000488061 CCDC184Q52MB2 194 aa23.42■■□□□ 1.34
PDE6B-211ENST00000488061 NBPF10Q6P3W6 841 aaKnown RBP23.42■■□□□ 1.34
PDE6B-211ENST00000488061 NBPF15Q8N660 670 aa23.42■■□□□ 1.34
PDE6B-211ENST00000488061 CFAP44Q96MT7 982 aa23.42■■□□□ 1.34
PDE6B-211ENST00000488061 MRS2Q9HD23 443 aa23.42■■□□□ 1.34
PDE6B-211ENST00000488061 TBC1D2BQ9UPU7 963 aa23.42■■□□□ 1.34
PDE6B-211ENST00000488061 BRCA1P38398 1863 aaKnown RBP23.42■■□□□ 1.34
PDE6B-211ENST00000488061 ZNF652Q9Y2D9 606 aa23.41■■□□□ 1.34
PDE6B-211ENST00000488061 HOXB7P09629 217 aa23.4■■□□□ 1.34
PDE6B-211ENST00000488061 ZNF330Q9Y3S2 320 aaPredicted RBP23.4■■□□□ 1.34
PDE6B-211ENST00000488061 CARMIL3Q8ND23 1372 aa23.4■■□□□ 1.34
PDE6B-211ENST00000488061 WDR90Q96KV7 1748 aa23.39■■□□□ 1.34
PDE6B-211ENST00000488061 SERPINB2P05120 415 aa23.39■■□□□ 1.33
PDE6B-211ENST00000488061 CCDC27Q2M243 656 aa23.39■■□□□ 1.33
PDE6B-211ENST00000488061 NMRK2Q9NPI5 230 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms