RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 RIMBP3BA6NNM3 1639 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 RIMBP3Q9UFD9 1639 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 ZBTB39O15060 712 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 ZBTB24O43167 697 aaPredicted RBP5.13□□□□□ -1.59
GPNMB-212ENST00000487890 ADD1P35611 737 aaKnown RBP5.13□□□□□ -1.59
GPNMB-212ENST00000487890 TRIM32Q13049 653 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 FAM26DQ5JW98 314 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 SLC9A9Q8IVB4 645 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 ZNF784Q8NCA9 323 aaPredicted RBP5.13□□□□□ -1.59
GPNMB-212ENST00000487890 TMC1Q8TDI8 760 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 FAM161BQ96MY7 647 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 CDK15Q96Q40 435 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 C2orf49Q9BVC5 232 aaPredicted RBP5.13□□□□□ -1.59
GPNMB-212ENST00000487890 STIM2Q9P246 746 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 WWC3Q9ULE0 1092 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 SOGA1O94964 1423 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 FGD5Q6ZNL6 1462 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 CUX1P39880 1505 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 RNF223E7ERA6 249 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 LILRA1O75019 489 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 LDHBP07195 334 aaKnown RBP5.12□□□□□ -1.59
GPNMB-212ENST00000487890 ERCC5P28715 1186 aaPredicted RBP5.12□□□□□ -1.59
GPNMB-212ENST00000487890 MAPK8P45983 427 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 WNT7BP56706 349 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 EHHADHQ08426 723 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 AAMPQ13685 434 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 STAG2Q8N3U4 1231 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 CITED4Q96RK1 184 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 SETDB2Q96T68 719 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 DUSP9Q99956 384 aaKnown RBP5.12□□□□□ -1.59
GPNMB-212ENST00000487890 QTRT2Q9H974 415 aaKnown RBP5.12□□□□□ -1.59
GPNMB-212ENST00000487890 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.12□□□□□ -1.59
GPNMB-212ENST00000487890 SCHIP1Q9P0W5 487 aaPredicted RBP5.12□□□□□ -1.59
GPNMB-212ENST00000487890 PARP2Q9UGN5 583 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 LRFN2Q9ULH4 789 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 USP3Q9Y6I4 520 aa5.12□□□□□ -1.59
GPNMB-212ENST00000487890 A6NJY4 79 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 SCAMP3O14828 347 aaKnown RBP5.11□□□□□ -1.59
GPNMB-212ENST00000487890 GPR182O15218 404 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 FSHRP23945 695 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 SMTNP53814 917 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 MTFR1Q15390 333 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 ALKBH2Q6NS38 261 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 ATCAYQ86WG3 371 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 FAM177A1Q8N128 213 aaPredicted RBP5.11□□□□□ -1.59
GPNMB-212ENST00000487890 EHBP1Q8NDI1 1231 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 FAM129BQ96TA1 746 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 PRKD2Q9BZL6 878 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 RAB6BQ9NRW1 208 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 PPP1R1BQ9UD71 204 aaPredicted RBP5.11□□□□□ -1.59
GPNMB-212ENST00000487890 TDRD9Q8NDG6 1382 aaKnown RBP5.11□□□□□ -1.59
GPNMB-212ENST00000487890 PBRM1Q86U86 1689 aa5.11□□□□□ -1.59
GPNMB-212ENST00000487890 PRPF40AO75400 957 aaKnown RBP5.1□□□□□ -1.59
GPNMB-212ENST00000487890 GNRH1P01148 92 aa5.1□□□□□ -1.59
GPNMB-212ENST00000487890 MYT1Q01538 1121 aa5.1□□□□□ -1.59
GPNMB-212ENST00000487890 XPCQ01831 940 aaPredicted RBP5.1□□□□□ -1.59
GPNMB-212ENST00000487890 DHX9Q08211 1270 aaKnown RBP5.1□□□□□ -1.59
GPNMB-212ENST00000487890 RAD51AP2Q09MP3 1159 aa5.1□□□□□ -1.59
GPNMB-212ENST00000487890 SNAPC4Q5SXM2 1469 aa5.1□□□□□ -1.59
GPNMB-212ENST00000487890 PPP1R26Q5T8A7 1209 aaPredicted RBP5.1□□□□□ -1.59
GPNMB-212ENST00000487890 RC3H1Q5TC82 1133 aaKnown RBP5.1□□□□□ -1.59
GPNMB-212ENST00000487890 CYP2U1Q7Z449 544 aa5.1□□□□□ -1.59
GPNMB-212ENST00000487890 METTL16Q86W50 562 aaKnown RBP5.1□□□□□ -1.59
GPNMB-212ENST00000487890 TMEM87AQ8NBN3 555 aa5.1□□□□□ -1.59
GPNMB-212ENST00000487890 XAGE2Q96GT9 111 aa5.1□□□□□ -1.59
GPNMB-212ENST00000487890 DMRTB1Q96MA1 342 aa5.1□□□□□ -1.59
GPNMB-212ENST00000487890 NIF3L1Q9GZT8 377 aa5.1□□□□□ -1.59
GPNMB-212ENST00000487890 BCL11AQ9H165 835 aa5.1□□□□□ -1.59
GPNMB-212ENST00000487890 WDR97A6NE52 1622 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 ARHGEF11O15085 1522 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 CDK2AP1O14519 115 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 SIAH2O43255 324 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 IL2RAP01589 272 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 PSMA6P60900 246 aaKnown RBP5.09□□□□□ -1.59
GPNMB-212ENST00000487890 DAB2P98082 770 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 SH3PXD2AQ5TCZ1 1133 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 TMC4Q7Z404 712 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 ANKLE1Q8NAG6 615 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 PIK3R5Q8WYR1 880 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 MYO19Q96H55 970 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 IQSEC3Q9UPP2 1182 aaPredicted RBP5.09□□□□□ -1.59
GPNMB-212ENST00000487890 TLL2Q9Y6L7 1015 aa5.09□□□□□ -1.59
GPNMB-212ENST00000487890 RPIAP49247 311 aa5.08□□□□□ -1.6
GPNMB-212ENST00000487890 ESCO1Q5FWF5 840 aa5.08□□□□□ -1.6
GPNMB-212ENST00000487890 NT5DC4Q86YG4 428 aa5.08□□□□□ -1.6
GPNMB-212ENST00000487890 CCDC116Q8IYX3 515 aa5.08□□□□□ -1.6
GPNMB-212ENST00000487890 ALKBH8Q96BT7 664 aaKnown RBP5.08□□□□□ -1.6
GPNMB-212ENST00000487890 NGLY1Q96IV0 654 aa5.08□□□□□ -1.6
GPNMB-212ENST00000487890 PUS7Q96PZ0 661 aaKnown RBP5.08□□□□□ -1.6
GPNMB-212ENST00000487890 ARHGEF10LQ9HCE6 1279 aa5.08□□□□□ -1.6
GPNMB-212ENST00000487890 POLIQ9UNA4 740 aa5.08□□□□□ -1.6
GPNMB-212ENST00000487890 HCN4Q9Y3Q4 1203 aa5.08□□□□□ -1.6
GPNMB-212ENST00000487890 HRH3Q9Y5N1 445 aa5.08□□□□□ -1.6
GPNMB-212ENST00000487890 GRIN2BQ13224 1484 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 MAGI1Q96QZ7 1491 aaPredicted RBP5.07□□□□□ -1.6
GPNMB-212ENST00000487890 EML1O00423 815 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 SORBS3O60504 671 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 NR3C2P08235 984 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 BRD2P25440 801 aaKnown RBP5.07□□□□□ -1.6
GPNMB-212ENST00000487890 PSMD2Q13200 908 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms