RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ATXN7O15265 892 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P36-201ENST00000487709 SCNN1DP51172 638 aa8.09□□□□□ -1.11
HMGB1P36-201ENST00000487709 GDF10P55107 478 aa8.09□□□□□ -1.11
HMGB1P36-201ENST00000487709 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
HMGB1P36-201ENST00000487709 KHNYNO15037 678 aaKnown RBP8.08□□□□□ -1.12
HMGB1P36-201ENST00000487709 ADH6P28332 368 aa8.08□□□□□ -1.12
HMGB1P36-201ENST00000487709 ARSJQ5FYB0 599 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P36-201ENST00000487709 PHTF2Q8N3S3 785 aa8.08□□□□□ -1.12
HMGB1P36-201ENST00000487709 INHAP05111 366 aa8.07□□□□□ -1.12
HMGB1P36-201ENST00000487709 MAPTP10636 758 aaKnown RBP8.07□□□□□ -1.12
HMGB1P36-201ENST00000487709 DOC2BQ14184 412 aa8.07□□□□□ -1.12
HMGB1P36-201ENST00000487709 NLRP8Q86W28 1048 aa8.07□□□□□ -1.12
HMGB1P36-201ENST00000487709 FCHSD1Q86WN1 690 aa8.07□□□□□ -1.12
HMGB1P36-201ENST00000487709 NIFKQ9BYG3 293 aaKnown RBP8.07□□□□□ -1.12
HMGB1P36-201ENST00000487709 SEMA6BQ9H3T3 888 aa8.07□□□□□ -1.12
HMGB1P36-201ENST00000487709 KLF15Q9UIH9 416 aa8.07□□□□□ -1.12
HMGB1P36-201ENST00000487709 HCN2Q9UL51 889 aa8.07□□□□□ -1.12
HMGB1P36-201ENST00000487709 A0A1W2PNR3 127 aa8.06□□□□□ -1.12
HMGB1P36-201ENST00000487709 TNP2Q05952 138 aa8.06□□□□□ -1.12
HMGB1P36-201ENST00000487709 C1orf216Q8TAB5 229 aa8.06□□□□□ -1.12
HMGB1P36-201ENST00000487709 SIRT1Q96EB6 747 aa8.06□□□□□ -1.12
HMGB1P36-201ENST00000487709 KRTAP4-8Q9BYQ9 185 aa8.06□□□□□ -1.12
HMGB1P36-201ENST00000487709 SERTAD1Q9UHV2 236 aa8.06□□□□□ -1.12
HMGB1P36-201ENST00000487709 ITGB7P26010 798 aa8.05□□□□□ -1.12
HMGB1P36-201ENST00000487709 PCBP4P57723 403 aaKnown RBP8.05□□□□□ -1.12
HMGB1P36-201ENST00000487709 NBPF1Q3BBV0 1214 aa8.05□□□□□ -1.12
HMGB1P36-201ENST00000487709 SMTNP53814 917 aa8.04□□□□□ -1.12
HMGB1P36-201ENST00000487709 VAC14Q08AM6 782 aa8.04□□□□□ -1.12
HMGB1P36-201ENST00000487709 IRF5Q13568 498 aa8.04□□□□□ -1.12
HMGB1P36-201ENST00000487709 TRIM11Q96F44 468 aa8.04□□□□□ -1.12
HMGB1P36-201ENST00000487709 PRR12Q9ULL5 1215 aa8.04□□□□□ -1.12
HMGB1P36-201ENST00000487709 GJA3Q9Y6H8 435 aa8.04□□□□□ -1.12
HMGB1P36-201ENST00000487709 TATP17735 454 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P36-201ENST00000487709 BRPF1P55201 1214 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P36-201ENST00000487709 PLVAPQ9BX97 442 aa8.03□□□□□ -1.12
HMGB1P36-201ENST00000487709 USP3Q9Y6I4 520 aa8.03□□□□□ -1.12
HMGB1P36-201ENST00000487709 GATA4P43694 442 aa8.02□□□□□ -1.13
HMGB1P36-201ENST00000487709 FAM182BQ5T319 152 aa8.02□□□□□ -1.13
HMGB1P36-201ENST00000487709 PRM3Q9NNZ6 103 aa8.02□□□□□ -1.13
HMGB1P36-201ENST00000487709 CHIC2Q9UKJ5 165 aa8.02□□□□□ -1.13
HMGB1P36-201ENST00000487709 ZMYM1Q5SVZ6 1142 aa8.01□□□□□ -1.13
HMGB1P36-201ENST00000487709 ZNF468Q5VIY5 522 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P36-201ENST00000487709 PSMG3-AS1Q96PY0 264 aa8.01□□□□□ -1.13
HMGB1P36-201ENST00000487709 AVENQ9NQS1 362 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P36-201ENST00000487709 CABP1Q9NZU7 370 aa8.01□□□□□ -1.13
HMGB1P36-201ENST00000487709 FAM157BP0CG42 384 aa8□□□□□ -1.13
HMGB1P36-201ENST00000487709 SPATA31C1P0DKV0 1188 aa8□□□□□ -1.13
HMGB1P36-201ENST00000487709 BICDL1Q6ZP65 573 aa8□□□□□ -1.13
HMGB1P36-201ENST00000487709 PLPP7Q8NBV4 271 aa8□□□□□ -1.13
HMGB1P36-201ENST00000487709 ZIC5Q96T25 663 aa8□□□□□ -1.13
HMGB1P36-201ENST00000487709 STRN4Q9NRL3 753 aa8□□□□□ -1.13
HMGB1P36-201ENST00000487709 PARP3Q9Y6F1 533 aa8□□□□□ -1.13
HMGB1P36-201ENST00000487709 A6NJY4 79 aa7.99□□□□□ -1.13
HMGB1P36-201ENST00000487709 TMEM229AB2RXF0 380 aa7.99□□□□□ -1.13
HMGB1P36-201ENST00000487709 ZNF295-AS1Q8N0V1 137 aa7.99□□□□□ -1.13
HMGB1P36-201ENST00000487709 ZDHHC3Q9NYG2 299 aa7.99□□□□□ -1.13
HMGB1P36-201ENST00000487709 MARK1Q9P0L2 795 aa7.99□□□□□ -1.13
HMGB1P36-201ENST00000487709 MAP7D1Q3KQU3 841 aa7.98□□□□□ -1.13
HMGB1P36-201ENST00000487709 IQSEC3Q9UPP2 1182 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P36-201ENST00000487709 ELOA3CA0A087WX78 387 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P36-201ENST00000487709 ELOA3DA6NLF2 546 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P36-201ENST00000487709 CDK2AP1O14519 115 aa7.97□□□□□ -1.13
HMGB1P36-201ENST00000487709 ABL2P42684 1182 aa7.97□□□□□ -1.13
HMGB1P36-201ENST00000487709 ELOA3BQ3SY89 546 aa7.97□□□□□ -1.13
HMGB1P36-201ENST00000487709 SYT9Q86SS6 491 aa7.97□□□□□ -1.13
HMGB1P36-201ENST00000487709 ELOA3Q8NG57 546 aa7.97□□□□□ -1.13
HMGB1P36-201ENST00000487709 SCO2A0A1W2PP80 73 aa7.96□□□□□ -1.14
HMGB1P36-201ENST00000487709 TXLNAP40222 546 aa7.96□□□□□ -1.14
HMGB1P36-201ENST00000487709 MTFR1Q15390 333 aa7.96□□□□□ -1.14
HMGB1P36-201ENST00000487709 SLC4A9Q96Q91 983 aa7.96□□□□□ -1.14
HMGB1P36-201ENST00000487709 GDPD2Q9HCC8 539 aa7.96□□□□□ -1.14
HMGB1P36-201ENST00000487709 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
HMGB1P36-201ENST00000487709 EFSO43281 561 aa7.95□□□□□ -1.14
HMGB1P36-201ENST00000487709 ALAS2P22557 587 aa7.95□□□□□ -1.14
HMGB1P36-201ENST00000487709 PRRT3Q5FWE3 981 aa7.95□□□□□ -1.14
HMGB1P36-201ENST00000487709 SAMD5Q5TGI4 173 aa7.95□□□□□ -1.14
HMGB1P36-201ENST00000487709 SPDYE3A6NKU9 549 aa7.94□□□□□ -1.14
HMGB1P36-201ENST00000487709 APBA3O96018 575 aa7.94□□□□□ -1.14
HMGB1P36-201ENST00000487709 SEMA3FQ13275 785 aa7.94□□□□□ -1.14
HMGB1P36-201ENST00000487709 RSPO4Q2I0M5 234 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P36-201ENST00000487709 LRRC69Q6ZNQ3 347 aa7.94□□□□□ -1.14
HMGB1P36-201ENST00000487709 TPSG1Q9NRR2 321 aa7.94□□□□□ -1.14
HMGB1P36-201ENST00000487709 PIK3CDO00329 1044 aa7.93□□□□□ -1.14
HMGB1P36-201ENST00000487709 LAMC2Q13753 1193 aa7.93□□□□□ -1.14
HMGB1P36-201ENST00000487709 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P36-201ENST00000487709 M0R082 166 aa7.92□□□□□ -1.14
HMGB1P36-201ENST00000487709 PSME1Q06323 249 aa7.92□□□□□ -1.14
HMGB1P36-201ENST00000487709 ZNF417Q8TAU3 575 aa7.92□□□□□ -1.14
HMGB1P36-201ENST00000487709 ZDHHC1Q8WTX9 485 aa7.92□□□□□ -1.14
HMGB1P36-201ENST00000487709 ZNF587Q96SQ5 575 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P36-201ENST00000487709 PCDHGA11Q9Y5H2 935 aa7.92□□□□□ -1.14
HMGB1P36-201ENST00000487709 FOXD4L6Q3SYB3 417 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P36-201ENST00000487709 NKAPLQ5M9Q1 402 aa7.91□□□□□ -1.14
HMGB1P36-201ENST00000487709 FOXD4L3Q6VB84 417 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P36-201ENST00000487709 L3MBTL2Q969R5 705 aa7.91□□□□□ -1.14
HMGB1P36-201ENST00000487709 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
HMGB1P36-201ENST00000487709 BACH1O14867 736 aa7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 WASHC4Q2M389 1173 aa7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 EML3Q32P44 896 aa7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 TBCELQ5QJ74 424 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms