RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 ELOA3BQ3SY89 546 aa7.78□□□□□ -1.16
USP9X-208ENST00000487625 AMER1Q5JTC6 1135 aaPredicted RBP7.78□□□□□ -1.16
USP9X-208ENST00000487625 CCDC125Q86Z20 511 aa7.78□□□□□ -1.16
USP9X-208ENST00000487625 ELOA3Q8NG57 546 aa7.78□□□□□ -1.16
USP9X-208ENST00000487625 TP53INP1Q96A56 240 aa7.78□□□□□ -1.16
USP9X-208ENST00000487625 C9orf172C9J069 976 aa7.77□□□□□ -1.17
USP9X-208ENST00000487625 GNRH1P01148 92 aa7.77□□□□□ -1.17
USP9X-208ENST00000487625 SELPP16109 830 aa7.77□□□□□ -1.17
USP9X-208ENST00000487625 TMEM214Q6NUQ4 689 aaKnown RBP7.77□□□□□ -1.17
USP9X-208ENST00000487625 RTN4Q9NQC3 1192 aaKnown RBP7.77□□□□□ -1.17
USP9X-208ENST00000487625 RNF114Q9Y508 228 aa7.77□□□□□ -1.17
USP9X-208ENST00000487625 M0R082 166 aa7.76□□□□□ -1.17
USP9X-208ENST00000487625 IRAK1P51617 712 aa7.76□□□□□ -1.17
USP9X-208ENST00000487625 ZNF417Q8TAU3 575 aa7.76□□□□□ -1.17
USP9X-208ENST00000487625 ZNF587Q96SQ5 575 aaPredicted RBP7.76□□□□□ -1.17
USP9X-208ENST00000487625 SSBP4Q9BWG4 385 aaPredicted RBP7.76□□□□□ -1.17
USP9X-208ENST00000487625 KRTAP4-5Q9BYR2 181 aa7.76□□□□□ -1.17
USP9X-208ENST00000487625 HMX1Q9NP08 348 aaPredicted RBP7.76□□□□□ -1.17
USP9X-208ENST00000487625 PRDM6Q9NQX0 595 aa7.76□□□□□ -1.17
USP9X-208ENST00000487625 POLR3EQ9NVU0 708 aa7.76□□□□□ -1.17
USP9X-208ENST00000487625 TRIM66O15016 1216 aa7.75□□□□□ -1.17
USP9X-208ENST00000487625 TAL1P17542 331 aaPredicted RBP7.75□□□□□ -1.17
USP9X-208ENST00000487625 ATP4AP20648 1035 aa7.75□□□□□ -1.17
USP9X-208ENST00000487625 C8orf86Q6ZUL3 223 aa7.75□□□□□ -1.17
USP9X-208ENST00000487625 NLRP8Q86W28 1048 aa7.75□□□□□ -1.17
USP9X-208ENST00000487625 PNMA1Q8ND90 353 aa7.75□□□□□ -1.17
USP9X-208ENST00000487625 XAGE2Q96GT9 111 aa7.75□□□□□ -1.17
USP9X-208ENST00000487625 PCMTD2Q9NV79 361 aa7.75□□□□□ -1.17
USP9X-208ENST00000487625 PCDHB9Q9Y5E1 797 aa7.75□□□□□ -1.17
USP9X-208ENST00000487625 NID1P14543 1247 aa7.74□□□□□ -1.17
USP9X-208ENST00000487625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.74□□□□□ -1.17
USP9X-208ENST00000487625 KHNYNO15037 678 aaKnown RBP7.73□□□□□ -1.17
USP9X-208ENST00000487625 GTF2E1P29083 439 aaPredicted RBP7.73□□□□□ -1.17
USP9X-208ENST00000487625 JAG1P78504 1218 aa7.73□□□□□ -1.17
USP9X-208ENST00000487625 LCE4AQ5TA78 99 aa7.73□□□□□ -1.17
USP9X-208ENST00000487625 RHBDD1Q8TEB9 315 aa7.73□□□□□ -1.17
USP9X-208ENST00000487625 PRR12Q9ULL5 1215 aa7.73□□□□□ -1.17
USP9X-208ENST00000487625 STARD13Q9Y3M8 1113 aa7.73□□□□□ -1.17
USP9X-208ENST00000487625 PCDHB11Q9Y5F2 797 aa7.73□□□□□ -1.17
USP9X-208ENST00000487625 ALBP02768 609 aa7.72□□□□□ -1.17
USP9X-208ENST00000487625 ALAS2P22557 587 aa7.72□□□□□ -1.17
USP9X-208ENST00000487625 NRG1Q02297 640 aaPredicted RBP7.71□□□□□ -1.18
USP9X-208ENST00000487625 RNF20Q5VTR2 975 aa7.71□□□□□ -1.18
USP9X-208ENST00000487625 TBC1D9Q6ZT07 1266 aa7.71□□□□□ -1.18
USP9X-208ENST00000487625 STRN4Q9NRL3 753 aa7.71□□□□□ -1.18
USP9X-208ENST00000487625 PLA2G4AP47712 749 aa7.7□□□□□ -1.18
USP9X-208ENST00000487625 SHISA2Q6UWI4 295 aa7.7□□□□□ -1.18
USP9X-208ENST00000487625 PPARGC1BQ86YN6 1023 aaKnown RBP7.7□□□□□ -1.18
USP9X-208ENST00000487625 MICALL1Q8N3F8 863 aa7.7□□□□□ -1.18
USP9X-208ENST00000487625 LENG1Q96BZ8 264 aaPredicted RBP7.7□□□□□ -1.18
USP9X-208ENST00000487625 OAS3Q9Y6K5 1087 aaKnown RBP7.69□□□□□ -1.18
USP9X-208ENST00000487625 ADARB2-AS1A8MUL3 147 aa7.68□□□□□ -1.18
USP9X-208ENST00000487625 FAM157BP0CG42 384 aa7.68□□□□□ -1.18
USP9X-208ENST00000487625 SYT9Q86SS6 491 aa7.68□□□□□ -1.18
USP9X-208ENST00000487625 A0A1W2PNR3 127 aa7.67□□□□□ -1.18
USP9X-208ENST00000487625 AP1G2O75843 785 aa7.67□□□□□ -1.18
USP9X-208ENST00000487625 SSTR4P31391 388 aa7.67□□□□□ -1.18
USP9X-208ENST00000487625 C1orf216Q8TAB5 229 aa7.67□□□□□ -1.18
USP9X-208ENST00000487625 ESF1Q9H501 851 aaKnown RBP7.67□□□□□ -1.18
USP9X-208ENST00000487625 ZBBXA8MT70 800 aa7.66□□□□□ -1.18
USP9X-208ENST00000487625 FBXO45P0C2W1 286 aa7.66□□□□□ -1.18
USP9X-208ENST00000487625 A0A0A0MRY4 1105 aa7.65□□□□□ -1.18
USP9X-208ENST00000487625 CD97P48960 835 aa7.65□□□□□ -1.18
USP9X-208ENST00000487625 RSPH6AQ9H0K4 717 aa7.65□□□□□ -1.18
USP9X-208ENST00000487625 MARK1Q9P0L2 795 aa7.65□□□□□ -1.18
USP9X-208ENST00000487625 EFSO43281 561 aa7.64□□□□□ -1.19
USP9X-208ENST00000487625 SIN3BO75182 1162 aa7.64□□□□□ -1.19
USP9X-208ENST00000487625 TRAPPC3LQ5T215 181 aa7.64□□□□□ -1.19
USP9X-208ENST00000487625 STAU1O95793 577 aaKnown RBP7.63□□□□□ -1.19
USP9X-208ENST00000487625 USP17L8P0C7I0 530 aa7.63□□□□□ -1.19
USP9X-208ENST00000487625 C20orf204Q6ZNR8 217 aa7.63□□□□□ -1.19
USP9X-208ENST00000487625 ZC3H15Q8WU90 426 aaKnown RBP7.63□□□□□ -1.19
USP9X-208ENST00000487625 TLR1Q15399 786 aa7.62□□□□□ -1.19
USP9X-208ENST00000487625 TNFRSF25Q93038 417 aa7.62□□□□□ -1.19
USP9X-208ENST00000487625 TRIM34Q9BYJ4 488 aa7.62□□□□□ -1.19
USP9X-208ENST00000487625 GP2P55259 537 aaKnown RBP7.61□□□□□ -1.19
USP9X-208ENST00000487625 ESCO1Q5FWF5 840 aa7.61□□□□□ -1.19
USP9X-208ENST00000487625 ARSJQ5FYB0 599 aaPredicted RBP7.6□□□□□ -1.19
USP9X-208ENST00000487625 SAMD5Q5TGI4 173 aa7.6□□□□□ -1.19
USP9X-208ENST00000487625 AIDAQ96BJ3 306 aa7.6□□□□□ -1.19
USP9X-208ENST00000487625 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.6□□□□□ -1.19
USP9X-208ENST00000487625 CDCA7Q9BWT1 371 aaPredicted RBP7.6□□□□□ -1.19
USP9X-208ENST00000487625 ETNK1Q9HBU6 452 aa7.6□□□□□ -1.19
USP9X-208ENST00000487625 MED26O95402 600 aa7.59□□□□□ -1.19
USP9X-208ENST00000487625 ZIC5Q96T25 663 aa7.59□□□□□ -1.19
USP9X-208ENST00000487625 USP21Q9UK80 565 aa7.59□□□□□ -1.19
USP9X-208ENST00000487625 ADH7P40394 386 aa7.58□□□□□ -1.2
USP9X-208ENST00000487625 PDE4DQ08499 809 aa7.58□□□□□ -1.2
USP9X-208ENST00000487625 PRR23CQ6ZRP0 262 aa7.58□□□□□ -1.2
USP9X-208ENST00000487625 PROCA1Q8NCQ7 364 aaPredicted RBP7.58□□□□□ -1.2
USP9X-208ENST00000487625 AK7Q96M32 723 aa7.58□□□□□ -1.2
USP9X-208ENST00000487625 MYCP01106 439 aaPredicted RBP7.57□□□□□ -1.2
USP9X-208ENST00000487625 RAC1P63000 192 aa7.57□□□□□ -1.2
USP9X-208ENST00000487625 KIAA1324LA8MWY0 1029 aaPredicted RBP7.56□□□□□ -1.2
USP9X-208ENST00000487625 ZNF295-AS1Q8N0V1 137 aa7.56□□□□□ -1.2
USP9X-208ENST00000487625 SLC30A3Q99726 388 aa7.56□□□□□ -1.2
USP9X-208ENST00000487625 FSTP19883 344 aa7.55□□□□□ -1.2
USP9X-208ENST00000487625 FMR1NBQ8N0W7 255 aaPredicted RBP7.55□□□□□ -1.2
USP9X-208ENST00000487625 WFDC12Q8WWY7 111 aa7.55□□□□□ -1.2
USP9X-208ENST00000487625 CCDC85AQ96PX6 553 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms