RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 ENAMQ9NRM1 1142 aa10.03□□□□□ -0.8
CUL3-211ENST00000487558 DOLKQ9UPQ8 538 aa10.03□□□□□ -0.8
CUL3-211ENST00000487558 NOD1Q9Y239 953 aa10.03□□□□□ -0.8
CUL3-211ENST00000487558 WASLO00401 505 aaPredicted RBP10.02□□□□□ -0.81
CUL3-211ENST00000487558 F11P03951 625 aa10.02□□□□□ -0.81
CUL3-211ENST00000487558 TAS1R3Q7RTX0 852 aa10.02□□□□□ -0.81
CUL3-211ENST00000487558 NPM2Q86SE8 214 aaKnown RBP10.02□□□□□ -0.81
CUL3-211ENST00000487558 STK32AQ8WU08 396 aa10.02□□□□□ -0.81
CUL3-211ENST00000487558 ACDQ96AP0 544 aa10.02□□□□□ -0.81
CUL3-211ENST00000487558 HRH3Q9Y5N1 445 aa10.02□□□□□ -0.81
CUL3-211ENST00000487558 IL2RAP01589 272 aa10.01□□□□□ -0.81
CUL3-211ENST00000487558 BCRP11274 1271 aa10.01□□□□□ -0.81
CUL3-211ENST00000487558 TRERF1Q96PN7 1200 aa10.01□□□□□ -0.81
CUL3-211ENST00000487558 CCDC85AQ96PX6 553 aaPredicted RBP10.01□□□□□ -0.81
CUL3-211ENST00000487558 ESYT1Q9BSJ8 1104 aa10.01□□□□□ -0.81
CUL3-211ENST00000487558 ESF1Q9H501 851 aaKnown RBP10.01□□□□□ -0.81
CUL3-211ENST00000487558 IGHA1P01876 353 aa10□□□□□ -0.81
CUL3-211ENST00000487558 CENPCQ03188 943 aa10□□□□□ -0.81
CUL3-211ENST00000487558 TSGA10IPQ3SY00 556 aa10□□□□□ -0.81
CUL3-211ENST00000487558 GPAT2Q6NUI2 795 aa10□□□□□ -0.81
CUL3-211ENST00000487558 ANKMY2Q8IV38 441 aa10□□□□□ -0.81
CUL3-211ENST00000487558 OGFOD1Q8N543 542 aa10□□□□□ -0.81
CUL3-211ENST00000487558 CNKSR1Q969H4 720 aa10□□□□□ -0.81
CUL3-211ENST00000487558 SIRT1Q96EB6 747 aa10□□□□□ -0.81
CUL3-211ENST00000487558 NUCKS1Q9H1E3 243 aaKnown RBP10□□□□□ -0.81
CUL3-211ENST00000487558 RAB6BQ9NRW1 208 aa10□□□□□ -0.81
CUL3-211ENST00000487558 IVNS1ABPQ9Y6Y0 642 aa10□□□□□ -0.81
CUL3-211ENST00000487558 THBS1P07996 1170 aa9.99□□□□□ -0.81
CUL3-211ENST00000487558 MFAP1P55081 439 aaKnown RBP9.99□□□□□ -0.81
CUL3-211ENST00000487558 FOXK2Q01167 660 aa9.99□□□□□ -0.81
CUL3-211ENST00000487558 XAGE2Q96GT9 111 aa9.99□□□□□ -0.81
CUL3-211ENST00000487558 LRRC4BQ9NT99 713 aa9.99□□□□□ -0.81
CUL3-211ENST00000487558 DNAAF2Q9NVR5 837 aaKnown RBP9.99□□□□□ -0.81
CUL3-211ENST00000487558 OXLD1Q5BKU9 147 aa9.98□□□□□ -0.81
CUL3-211ENST00000487558 LARGE2Q8N3Y3 721 aa9.98□□□□□ -0.81
CUL3-211ENST00000487558 RBM19Q9Y4C8 960 aaKnown RBP9.98□□□□□ -0.81
CUL3-211ENST00000487558 CNTNAP5Q8WYK1 1306 aa9.98□□□□□ -0.81
CUL3-211ENST00000487558 MX2P20592 715 aa9.97□□□□□ -0.81
CUL3-211ENST00000487558 USP4Q13107 963 aa9.97□□□□□ -0.81
CUL3-211ENST00000487558 CCER1Q8TC90 406 aaPredicted RBP9.97□□□□□ -0.81
CUL3-211ENST00000487558 FHDC1Q9C0D6 1143 aaPredicted RBP9.97□□□□□ -0.81
CUL3-211ENST00000487558 MYCP01106 439 aaPredicted RBP9.96□□□□□ -0.82
CUL3-211ENST00000487558 CLDN10P78369 228 aa9.96□□□□□ -0.82
CUL3-211ENST00000487558 DPYDQ12882 1025 aa9.96□□□□□ -0.82
CUL3-211ENST00000487558 BEND7Q8N7W2 519 aaPredicted RBP9.96□□□□□ -0.82
CUL3-211ENST00000487558 CFHR5Q9BXR6 569 aa9.96□□□□□ -0.82
CUL3-211ENST00000487558 GNEQ9Y223 722 aaKnown RBP9.96□□□□□ -0.82
CUL3-211ENST00000487558 SWI5Q1ZZU3 235 aa9.95□□□□□ -0.82
CUL3-211ENST00000487558 CLP1Q92989 425 aaKnown RBP9.95□□□□□ -0.82
CUL3-211ENST00000487558 ZNF594Q96JF6 807 aaPredicted RBP9.95□□□□□ -0.82
CUL3-211ENST00000487558 ZSCAN10Q96SZ4 725 aaPredicted RBP9.95□□□□□ -0.82
CUL3-211ENST00000487558 NSFL1CQ9UNZ2 370 aaKnown RBP9.95□□□□□ -0.82
CUL3-211ENST00000487558 PHF20L1A8MW92 1017 aa9.94□□□□□ -0.82
CUL3-211ENST00000487558 GTF2IP78347 998 aa9.94□□□□□ -0.82
CUL3-211ENST00000487558 UBAP2LQ14157 1087 aaKnown RBP9.94□□□□□ -0.82
CUL3-211ENST00000487558 NEDD1Q8NHV4 660 aa9.94□□□□□ -0.82
CUL3-211ENST00000487558 A0A1B0GTH6 734 aa9.93□□□□□ -0.82
CUL3-211ENST00000487558 ZBTB7BO15156 539 aaPredicted RBP9.93□□□□□ -0.82
CUL3-211ENST00000487558 OIP5O43482 229 aa9.93□□□□□ -0.82
CUL3-211ENST00000487558 SSFA2P28290 1259 aa9.93□□□□□ -0.82
CUL3-211ENST00000487558 ARID4AP29374 1257 aaPredicted RBP9.93□□□□□ -0.82
CUL3-211ENST00000487558 PHKA2P46019 1235 aa9.93□□□□□ -0.82
CUL3-211ENST00000487558 FAM69CQ0P6D2 419 aa9.93□□□□□ -0.82
CUL3-211ENST00000487558 SIX5Q8N196 739 aa9.93□□□□□ -0.82
CUL3-211ENST00000487558 DCAF5Q96JK2 942 aa9.93□□□□□ -0.82
CUL3-211ENST00000487558 GPAMQ9HCL2 828 aa9.93□□□□□ -0.82
CUL3-211ENST00000487558 MAP2K3P46734 347 aa9.92□□□□□ -0.82
CUL3-211ENST00000487558 SEC13P55735 322 aa9.92□□□□□ -0.82
CUL3-211ENST00000487558 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.82
CUL3-211ENST00000487558 RGS22Q8NE09 1264 aa9.92□□□□□ -0.82
CUL3-211ENST00000487558 ITGB2P05107 769 aa9.91□□□□□ -0.82
CUL3-211ENST00000487558 PSME1Q06323 249 aa9.91□□□□□ -0.82
CUL3-211ENST00000487558 C4orf17Q53FE4 359 aa9.91□□□□□ -0.82
CUL3-211ENST00000487558 ESCO1Q5FWF5 840 aa9.91□□□□□ -0.82
CUL3-211ENST00000487558 CCDC102BQ68D86 513 aa9.91□□□□□ -0.82
CUL3-211ENST00000487558 OXCT2Q9BYC2 517 aaPredicted RBP9.91□□□□□ -0.82
CUL3-211ENST00000487558 ATP2B4P23634 1241 aa9.9□□□□□ -0.82
CUL3-211ENST00000487558 LBRQ14739 615 aaKnown RBP9.9□□□□□ -0.82
CUL3-211ENST00000487558 CCDC27Q2M243 656 aa9.9□□□□□ -0.82
CUL3-211ENST00000487558 GNASQ5JWF2 1037 aa9.9□□□□□ -0.82
CUL3-211ENST00000487558 PHLDB3Q6NSJ2 640 aa9.9□□□□□ -0.82
CUL3-211ENST00000487558 TMEM214Q6NUQ4 689 aaKnown RBP9.9□□□□□ -0.82
CUL3-211ENST00000487558 PODNQ7Z5L7 613 aa9.9□□□□□ -0.82
CUL3-211ENST00000487558 TXNDC2Q86VQ3 553 aa9.9□□□□□ -0.82
CUL3-211ENST00000487558 ETNK1Q9HBU6 452 aa9.9□□□□□ -0.82
CUL3-211ENST00000487558 MTMR7Q9Y216 660 aa9.9□□□□□ -0.82
CUL3-211ENST00000487558 PCDHGA11Q9Y5H2 935 aa9.9□□□□□ -0.82
CUL3-211ENST00000487558 MSX1P28360 303 aa9.89□□□□□ -0.83
CUL3-211ENST00000487558 PLA2G4EQ3MJ16 856 aa9.89□□□□□ -0.83
CUL3-211ENST00000487558 KLRG1Q96E93 195 aa9.89□□□□□ -0.83
CUL3-211ENST00000487558 PHF24Q9UPV7 400 aa9.89□□□□□ -0.83
CUL3-211ENST00000487558 KIAA1024Q9UPX6 916 aa9.89□□□□□ -0.83
CUL3-211ENST00000487558 DKK1O94907 266 aa9.88□□□□□ -0.83
CUL3-211ENST00000487558 STAU1O95793 577 aaKnown RBP9.88□□□□□ -0.83
CUL3-211ENST00000487558 PPARGC1BQ86YN6 1023 aaKnown RBP9.88□□□□□ -0.83
CUL3-211ENST00000487558 TPCN2Q8NHX9 752 aa9.88□□□□□ -0.83
CUL3-211ENST00000487558 RUBCNLQ9H714 662 aa9.88□□□□□ -0.83
CUL3-211ENST00000487558 SLAIN2Q9P270 581 aa9.88□□□□□ -0.83
CUL3-211ENST00000487558 SHISA8B8ZZ34 492 aa9.87□□□□□ -0.83
CUL3-211ENST00000487558 GTF2E1P29083 439 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms