RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 ZBED9Q6R2W3 1325 aa16.53■□□□□ 0.24
PRDM2-208ENST00000487453 E9PSI1 815 aa16.53■□□□□ 0.24
PRDM2-208ENST00000487453 GIGYF1O75420 1035 aaPredicted RBP16.53■□□□□ 0.24
PRDM2-208ENST00000487453 CYP19A1P11511 503 aaPredicted RBP16.53■□□□□ 0.24
PRDM2-208ENST00000487453 SLC15A2Q16348 729 aa16.53■□□□□ 0.24
PRDM2-208ENST00000487453 CCDC87Q9NVE4 849 aa16.53■□□□□ 0.24
PRDM2-208ENST00000487453 TFCP2L1Q9NZI6 479 aa16.53■□□□□ 0.24
PRDM2-208ENST00000487453 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
PRDM2-208ENST00000487453 PHF14O94880 888 aa16.52■□□□□ 0.24
PRDM2-208ENST00000487453 R3HDM1Q15032 1099 aaKnown RBP16.52■□□□□ 0.24
PRDM2-208ENST00000487453 AKT1S1Q96B36 256 aa16.52■□□□□ 0.24
PRDM2-208ENST00000487453 CDCA7LQ96GN5 454 aa16.52■□□□□ 0.24
PRDM2-208ENST00000487453 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
PRDM2-208ENST00000487453 MYH14Q7Z406 1995 aaKnown RBP16.51■□□□□ 0.23
PRDM2-208ENST00000487453 PSDA5PKW4 1024 aaPredicted RBP16.51■□□□□ 0.23
PRDM2-208ENST00000487453 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
PRDM2-208ENST00000487453 ZBTB1Q9Y2K1 713 aa16.51■□□□□ 0.23
PRDM2-208ENST00000487453 EIF2S2P20042 333 aaKnown RBP16.5■□□□□ 0.23
PRDM2-208ENST00000487453 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
PRDM2-208ENST00000487453 SLFN5Q08AF3 891 aa16.5■□□□□ 0.23
PRDM2-208ENST00000487453 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
PRDM2-208ENST00000487453 C8orf58Q8NAV2 365 aa16.5■□□□□ 0.23
PRDM2-208ENST00000487453 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
PRDM2-208ENST00000487453 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
PRDM2-208ENST00000487453 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
PRDM2-208ENST00000487453 CASZ1Q86V15 1759 aa16.5■□□□□ 0.23
PRDM2-208ENST00000487453 MSH5O43196 834 aa16.49■□□□□ 0.23
PRDM2-208ENST00000487453 PIP4K2AP48426 406 aaPredicted RBP16.49■□□□□ 0.23
PRDM2-208ENST00000487453 EXOSC9Q06265 439 aaKnown RBP16.49■□□□□ 0.23
PRDM2-208ENST00000487453 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
PRDM2-208ENST00000487453 RC3H1Q5TC82 1133 aaKnown RBP16.49■□□□□ 0.23
PRDM2-208ENST00000487453 HDGFL1Q5TGJ6 251 aa16.49■□□□□ 0.23
PRDM2-208ENST00000487453 INTS5Q6P9B9 1019 aaKnown RBP16.49■□□□□ 0.23
PRDM2-208ENST00000487453 A1BGP04217 495 aa16.48■□□□□ 0.23
PRDM2-208ENST00000487453 HOXB7P09629 217 aa16.48■□□□□ 0.23
PRDM2-208ENST00000487453 SMIM5Q71RC9 77 aa16.48■□□□□ 0.23
PRDM2-208ENST00000487453 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
PRDM2-208ENST00000487453 COL15A1P39059 1388 aa16.48■□□□□ 0.23
PRDM2-208ENST00000487453 PNPLA7Q6ZV29 1317 aa16.47■□□□□ 0.23
PRDM2-208ENST00000487453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.47■□□□□ 0.23
PRDM2-208ENST00000487453 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
PRDM2-208ENST00000487453 SSFA2P28290 1259 aa16.47■□□□□ 0.23
PRDM2-208ENST00000487453 NPM2Q86SE8 214 aaKnown RBP16.47■□□□□ 0.23
PRDM2-208ENST00000487453 AMIGO3Q86WK7 504 aa16.47■□□□□ 0.23
PRDM2-208ENST00000487453 SCN7AQ01118 1682 aa16.46■□□□□ 0.23
PRDM2-208ENST00000487453 SOS1Q07889 1333 aaPredicted RBP16.46■□□□□ 0.23
PRDM2-208ENST00000487453 MYL6BP14649 208 aa16.46■□□□□ 0.23
PRDM2-208ENST00000487453 FLAD1Q8NFF5 587 aa16.45■□□□□ 0.22
PRDM2-208ENST00000487453 BCORQ6W2J9 1755 aa16.45■□□□□ 0.22
PRDM2-208ENST00000487453 ERBB4Q15303 1308 aa16.45■□□□□ 0.22
PRDM2-208ENST00000487453 IL6STP40189 918 aaPredicted RBP16.44■□□□□ 0.22
PRDM2-208ENST00000487453 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
PRDM2-208ENST00000487453 ARXQ96QS3 562 aa16.44■□□□□ 0.22
PRDM2-208ENST00000487453 CHPF2Q9P2E5 772 aa16.44■□□□□ 0.22
PRDM2-208ENST00000487453 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
PRDM2-208ENST00000487453 ANXA1P04083 346 aa16.43■□□□□ 0.22
PRDM2-208ENST00000487453 ADRA2BP18089 450 aa16.43■□□□□ 0.22
PRDM2-208ENST00000487453 RFC4P35249 363 aa16.43■□□□□ 0.22
PRDM2-208ENST00000487453 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
PRDM2-208ENST00000487453 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
PRDM2-208ENST00000487453 COL23A1Q86Y22 540 aaPredicted RBP16.43■□□□□ 0.22
PRDM2-208ENST00000487453 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
PRDM2-208ENST00000487453 PDGFDQ9GZP0 370 aaPredicted RBP16.43■□□□□ 0.22
PRDM2-208ENST00000487453 TCERG1O14776 1098 aaKnown RBP16.42■□□□□ 0.22
PRDM2-208ENST00000487453 EIF5P55010 431 aaKnown RBP16.42■□□□□ 0.22
PRDM2-208ENST00000487453 TRMT2AQ8IZ69 625 aaKnown RBP16.42■□□□□ 0.22
PRDM2-208ENST00000487453 ARHGEF1Q92888 912 aaKnown RBP16.42■□□□□ 0.22
PRDM2-208ENST00000487453 STK31Q9BXU1 1019 aa16.42■□□□□ 0.22
PRDM2-208ENST00000487453 CHMP4AQ9BY43 222 aa16.42■□□□□ 0.22
PRDM2-208ENST00000487453 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
PRDM2-208ENST00000487453 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
PRDM2-208ENST00000487453 DDX21Q9NR30 783 aaKnown RBP eCLIP16.41■□□□□ 0.22
PRDM2-208ENST00000487453 A0A087WZG4 1122 aa16.4■□□□□ 0.22
PRDM2-208ENST00000487453 VAMP4O75379 141 aa16.4■□□□□ 0.22
PRDM2-208ENST00000487453 DZIP3Q86Y13 1208 aaKnown RBP16.4■□□□□ 0.22
PRDM2-208ENST00000487453 USP42Q9H9J4 1324 aaKnown RBP16.4■□□□□ 0.22
PRDM2-208ENST00000487453 ZPR1O75312 459 aa16.39■□□□□ 0.21
PRDM2-208ENST00000487453 ZBTB7AO95365 584 aa16.39■□□□□ 0.21
PRDM2-208ENST00000487453 PDIA6Q15084 440 aa16.39■□□□□ 0.21
PRDM2-208ENST00000487453 KIF6Q6ZMV9 814 aa16.39■□□□□ 0.21
PRDM2-208ENST00000487453 SRP68Q9UHB9 627 aaKnown RBP16.39■□□□□ 0.21
PRDM2-208ENST00000487453 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
PRDM2-208ENST00000487453 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
PRDM2-208ENST00000487453 AIMP1Q12904 312 aaKnown RBP16.38■□□□□ 0.21
PRDM2-208ENST00000487453 USPL1Q5W0Q7 1092 aa16.38■□□□□ 0.21
PRDM2-208ENST00000487453 MSL1Q68DK7 614 aa16.38■□□□□ 0.21
PRDM2-208ENST00000487453 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
PRDM2-208ENST00000487453 XAGE3Q8WTP9 111 aa16.37■□□□□ 0.21
PRDM2-208ENST00000487453 NARFQ9UHQ1 456 aa16.37■□□□□ 0.21
PRDM2-208ENST00000487453 ANKRD36CQ5JPF3 1778 aa16.36■□□□□ 0.21
PRDM2-208ENST00000487453 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
PRDM2-208ENST00000487453 TTLL7Q6ZT98 887 aa16.36■□□□□ 0.21
PRDM2-208ENST00000487453 COPS6Q7L5N1 327 aa16.36■□□□□ 0.21
PRDM2-208ENST00000487453 LRP10Q7Z4F1 713 aa16.36■□□□□ 0.21
PRDM2-208ENST00000487453 SLC16A10Q8TF71 515 aa16.36■□□□□ 0.21
PRDM2-208ENST00000487453 MTFR1LQ9H019 292 aa16.36■□□□□ 0.21
PRDM2-208ENST00000487453 ZBTB3Q9H5J0 574 aa16.36■□□□□ 0.21
PRDM2-208ENST00000487453 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
PRDM2-208ENST00000487453 GYS1P13807 737 aa16.35■□□□□ 0.21
PRDM2-208ENST00000487453 BCL2L13Q9BXK5 485 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms