RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
NEK4-204ENST00000487068 SSFA2P28290 1259 aa13.45□□□□□ -0.26
NEK4-204ENST00000487068 IFFO2Q5TF58 517 aa13.45□□□□□ -0.26
NEK4-204ENST00000487068 ZNF790Q6PG37 636 aa13.45□□□□□ -0.26
NEK4-204ENST00000487068 SMIM5Q71RC9 77 aa13.45□□□□□ -0.26
NEK4-204ENST00000487068 DNAJC10Q8IXB1 793 aa13.45□□□□□ -0.26
NEK4-204ENST00000487068 NLGN2Q8NFZ4 835 aa13.45□□□□□ -0.26
NEK4-204ENST00000487068 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
NEK4-204ENST00000487068 RRP7AQ9Y3A4 280 aaKnown RBP13.45□□□□□ -0.26
NEK4-204ENST00000487068 CRKLP46109 303 aaKnown RBP13.44□□□□□ -0.26
NEK4-204ENST00000487068 RIPK4P57078 832 aa13.44□□□□□ -0.26
NEK4-204ENST00000487068 LMOD3Q0VAK6 560 aa13.44□□□□□ -0.26
NEK4-204ENST00000487068 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
NEK4-204ENST00000487068 ADAMTS8Q9UP79 889 aa13.44□□□□□ -0.26
NEK4-204ENST00000487068 SCN7AQ01118 1682 aa13.44□□□□□ -0.26
NEK4-204ENST00000487068 BCORQ6W2J9 1755 aa13.43□□□□□ -0.26
NEK4-204ENST00000487068 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
NEK4-204ENST00000487068 FMNL2Q96PY5 1086 aa13.43□□□□□ -0.26
NEK4-204ENST00000487068 THUMPD2Q9BTF0 503 aaKnown RBP13.43□□□□□ -0.26
NEK4-204ENST00000487068 HEG1Q9ULI3 1381 aa13.43□□□□□ -0.26
NEK4-204ENST00000487068 RFC4P35249 363 aa13.42□□□□□ -0.26
NEK4-204ENST00000487068 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
NEK4-204ENST00000487068 FKBP8Q14318 412 aa13.42□□□□□ -0.26
NEK4-204ENST00000487068 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
NEK4-204ENST00000487068 ZNF496Q96IT1 587 aaPredicted RBP13.42□□□□□ -0.26
NEK4-204ENST00000487068 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
NEK4-204ENST00000487068 ZNF330Q9Y3S2 320 aaPredicted RBP13.42□□□□□ -0.26
NEK4-204ENST00000487068 TAF7Q15545 349 aaPredicted RBP13.41□□□□□ -0.26
NEK4-204ENST00000487068 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
NEK4-204ENST00000487068 RC3H1Q5TC82 1133 aaKnown RBP13.41□□□□□ -0.26
NEK4-204ENST00000487068 VSIG10Q8N0Z9 540 aa13.41□□□□□ -0.26
NEK4-204ENST00000487068 AFDNP55196 1824 aaKnown RBP13.41□□□□□ -0.26
NEK4-204ENST00000487068 KCNQ3O43525 872 aa13.4□□□□□ -0.26
NEK4-204ENST00000487068 RPS6KA4O75676 772 aa13.4□□□□□ -0.26
NEK4-204ENST00000487068 STARD3NLO95772 234 aa13.4□□□□□ -0.26
NEK4-204ENST00000487068 YBX3P16989 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
NEK4-204ENST00000487068 CCDC184Q52MB2 194 aa13.4□□□□□ -0.26
NEK4-204ENST00000487068 NPM2Q86SE8 214 aaKnown RBP13.4□□□□□ -0.26
NEK4-204ENST00000487068 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
NEK4-204ENST00000487068 COL15A1P39059 1388 aa13.4□□□□□ -0.26
NEK4-204ENST00000487068 GOLGB1Q14789 3259 aaKnown RBP13.39□□□□□ -0.27
NEK4-204ENST00000487068 CYP19A1P11511 503 aaPredicted RBP13.39□□□□□ -0.27
NEK4-204ENST00000487068 CANXP27824 592 aaKnown RBP13.39□□□□□ -0.27
NEK4-204ENST00000487068 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
NEK4-204ENST00000487068 ZBTB1Q9Y2K1 713 aa13.39□□□□□ -0.27
NEK4-204ENST00000487068 LAS1LQ9Y4W2 734 aaKnown RBP13.39□□□□□ -0.27
NEK4-204ENST00000487068 N4BP2Q86UW6 1770 aaPredicted RBP13.39□□□□□ -0.27
NEK4-204ENST00000487068 KIF13BQ9NQT8 1826 aa13.39□□□□□ -0.27
NEK4-204ENST00000487068 ATP10DQ9P241 1426 aa13.39□□□□□ -0.27
NEK4-204ENST00000487068 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
NEK4-204ENST00000487068 TEX13AQ9BXU3 409 aaPredicted RBP13.38□□□□□ -0.27
NEK4-204ENST00000487068 TSPYL4Q9UJ04 414 aa13.38□□□□□ -0.27
NEK4-204ENST00000487068 CACNA1SQ13698 1873 aa13.38□□□□□ -0.27
NEK4-204ENST00000487068 NUP98P52948 1817 aa13.37□□□□□ -0.27
NEK4-204ENST00000487068 ZPR1O75312 459 aa13.37□□□□□ -0.27
NEK4-204ENST00000487068 INTS5Q6P9B9 1019 aaKnown RBP13.37□□□□□ -0.27
NEK4-204ENST00000487068 SOS1Q07889 1333 aaPredicted RBP13.37□□□□□ -0.27
NEK4-204ENST00000487068 APAF1O14727 1248 aa13.36□□□□□ -0.27
NEK4-204ENST00000487068 SNRPA1P09661 255 aaKnown RBP13.36□□□□□ -0.27
NEK4-204ENST00000487068 SRP68Q9UHB9 627 aaKnown RBP13.36□□□□□ -0.27
NEK4-204ENST00000487068 USP42Q9H9J4 1324 aaKnown RBP13.36□□□□□ -0.27
NEK4-204ENST00000487068 PRAMEF22A3QJZ6 481 aa13.35□□□□□ -0.27
NEK4-204ENST00000487068 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
NEK4-204ENST00000487068 GPBP1L1Q9HC44 474 aaPredicted RBP13.35□□□□□ -0.27
NEK4-204ENST00000487068 MMP10P09238 476 aa13.34□□□□□ -0.27
NEK4-204ENST00000487068 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
NEK4-204ENST00000487068 CD2APQ9Y5K6 639 aa13.34□□□□□ -0.27
NEK4-204ENST00000487068 ANKRD36CQ5JPF3 1778 aa13.34□□□□□ -0.27
NEK4-204ENST00000487068 BRCA1P38398 1863 aaKnown RBP13.33□□□□□ -0.27
NEK4-204ENST00000487068 ADCY9O60503 1353 aa13.33□□□□□ -0.27
NEK4-204ENST00000487068 A1BGP04217 495 aa13.33□□□□□ -0.28
NEK4-204ENST00000487068 GYS1P13807 737 aa13.33□□□□□ -0.28
NEK4-204ENST00000487068 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.28
NEK4-204ENST00000487068 NLGN1Q8N2Q7 840 aa13.33□□□□□ -0.28
NEK4-204ENST00000487068 TRIM35Q9UPQ4 493 aa13.33□□□□□ -0.28
NEK4-204ENST00000487068 USP16Q9Y5T5 823 aa13.33□□□□□ -0.28
NEK4-204ENST00000487068 A0A087WZG4 1122 aa13.32□□□□□ -0.28
NEK4-204ENST00000487068 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
NEK4-204ENST00000487068 CALD1Q05682 793 aaKnown RBP13.32□□□□□ -0.28
NEK4-204ENST00000487068 PARP3Q9Y6F1 533 aa13.32□□□□□ -0.28
NEK4-204ENST00000487068 KIAA1551Q9HCM1 1747 aa13.32□□□□□ -0.28
NEK4-204ENST00000487068 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
NEK4-204ENST00000487068 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
NEK4-204ENST00000487068 DLEC1Q9Y238 1755 aa13.31□□□□□ -0.28
NEK4-204ENST00000487068 HSPA6P17066 643 aa13.31□□□□□ -0.28
NEK4-204ENST00000487068 IL6STP40189 918 aaPredicted RBP13.31□□□□□ -0.28
NEK4-204ENST00000487068 ZNF526Q8TF50 670 aaPredicted RBP13.31□□□□□ -0.28
NEK4-204ENST00000487068 DZIP3Q86Y13 1208 aaKnown RBP13.3□□□□□ -0.28
NEK4-204ENST00000487068 NARFQ9UHQ1 456 aa13.3□□□□□ -0.28
NEK4-204ENST00000487068 TBC1D2BQ9UPU7 963 aa13.3□□□□□ -0.28
NEK4-204ENST00000487068 SALL2Q9Y467 1007 aaPredicted RBP13.3□□□□□ -0.28
NEK4-204ENST00000487068 ANKRD31Q8N7Z5 1873 aa13.29□□□□□ -0.28
NEK4-204ENST00000487068 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
NEK4-204ENST00000487068 NPHP1O15259 732 aa13.29□□□□□ -0.28
NEK4-204ENST00000487068 MYL6BP14649 208 aa13.29□□□□□ -0.28
NEK4-204ENST00000487068 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
NEK4-204ENST00000487068 EIF5P55010 431 aaKnown RBP13.29□□□□□ -0.28
NEK4-204ENST00000487068 BICDL1Q6ZP65 573 aa13.29□□□□□ -0.28
NEK4-204ENST00000487068 NGEFQ8N5V2 710 aa13.29□□□□□ -0.28
NEK4-204ENST00000487068 BABAM1Q9NWV8 329 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms