RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 KRT28Q7Z3Y7 464 aa22.06■■□□□ 1.12
PDLIM7-207ENST00000486828 RAB11FIP3O75154 756 aa22.05■■□□□ 1.12
PDLIM7-207ENST00000486828 BRINP3Q76B58 766 aa22.05■■□□□ 1.12
PDLIM7-207ENST00000486828 PI4KAP2A4QPH2 592 aa22.04■■□□□ 1.12
PDLIM7-207ENST00000486828 ST18O60284 1047 aa22.04■■□□□ 1.12
PDLIM7-207ENST00000486828 PTMSP20962 102 aa22.04■■□□□ 1.12
PDLIM7-207ENST00000486828 PPP1R42Q7Z4L9 355 aa22.04■■□□□ 1.12
PDLIM7-207ENST00000486828 PI4KAP1Q8N8J0 262 aa22.04■■□□□ 1.12
PDLIM7-207ENST00000486828 ESYT1Q9BSJ8 1104 aa22.03■■□□□ 1.12
PDLIM7-207ENST00000486828 FSD2A1L4K1 749 aa22.02■■□□□ 1.12
PDLIM7-207ENST00000486828 DBF4Q9UBU7 674 aaPredicted RBP22.02■■□□□ 1.12
PDLIM7-207ENST00000486828 AXIN2Q9Y2T1 843 aa22.02■■□□□ 1.12
PDLIM7-207ENST00000486828 ADCY9O60503 1353 aa22.02■■□□□ 1.12
PDLIM7-207ENST00000486828 HEG1Q9ULI3 1381 aa22.02■■□□□ 1.12
PDLIM7-207ENST00000486828 PLEKHG5O94827 1062 aa22.02■■□□□ 1.11
PDLIM7-207ENST00000486828 PIP4K2BP78356 416 aa22.02■■□□□ 1.11
PDLIM7-207ENST00000486828 GZF1Q9H116 711 aaPredicted RBP22.02■■□□□ 1.11
PDLIM7-207ENST00000486828 NBPF7P0C2Y1 421 aaPredicted RBP22.01■■□□□ 1.11
PDLIM7-207ENST00000486828 CLEC17AQ6ZS10 378 aa22.01■■□□□ 1.11
PDLIM7-207ENST00000486828 SIPA1L3O60292 1781 aaPredicted RBP22.01■■□□□ 1.11
PDLIM7-207ENST00000486828 ALS2Q96Q42 1657 aa22.01■■□□□ 1.11
PDLIM7-207ENST00000486828 ADAMTS7Q9UKP4 1686 aa22.01■■□□□ 1.11
PDLIM7-207ENST00000486828 GOLGA6L3A6NEY3 463 aa22■■□□□ 1.11
PDLIM7-207ENST00000486828 CHMLP26374 656 aa22■■□□□ 1.11
PDLIM7-207ENST00000486828 TRIM6-TRIM34B2RNG4 842 aa22■■□□□ 1.11
PDLIM7-207ENST00000486828 GIGYF1O75420 1035 aaPredicted RBP22■■□□□ 1.11
PDLIM7-207ENST00000486828 SURF6O75683 361 aaKnown RBP22■■□□□ 1.11
PDLIM7-207ENST00000486828 ANXA1P04083 346 aa22■■□□□ 1.11
PDLIM7-207ENST00000486828 SSFA2P28290 1259 aa22■■□□□ 1.11
PDLIM7-207ENST00000486828 DDX17Q92841 729 aaKnown RBP22■■□□□ 1.11
PDLIM7-207ENST00000486828 RILPL2Q969X0 211 aa22■■□□□ 1.11
PDLIM7-207ENST00000486828 SRGAP3O43295 1099 aa21.99■■□□□ 1.11
PDLIM7-207ENST00000486828 IL1RAPL2Q9NP60 686 aa21.99■■□□□ 1.11
PDLIM7-207ENST00000486828 SKOR2Q2VWA4 1001 aaPredicted RBP21.98■■□□□ 1.11
PDLIM7-207ENST00000486828 RHPN1Q8TCX5 695 aa21.98■■□□□ 1.11
PDLIM7-207ENST00000486828 ERBB3P21860 1342 aa21.98■■□□□ 1.11
PDLIM7-207ENST00000486828 RGPD5Q99666 1765 aa21.98■■□□□ 1.11
PDLIM7-207ENST00000486828 KIF1BPQ96EK5 621 aa21.98■■□□□ 1.11
PDLIM7-207ENST00000486828 NPHP3Q7Z494 1330 aa21.98■■□□□ 1.11
PDLIM7-207ENST00000486828 CWC22Q9HCG8 908 aaKnown RBP21.97■■□□□ 1.11
PDLIM7-207ENST00000486828 MCCP23508 829 aa21.96■■□□□ 1.11
PDLIM7-207ENST00000486828 NUCB2P80303 420 aa21.96■■□□□ 1.11
PDLIM7-207ENST00000486828 ALDH1L1O75891 902 aa21.96■■□□□ 1.11
PDLIM7-207ENST00000486828 HSP90AB4PQ58FF6 505 aa21.96■■□□□ 1.11
PDLIM7-207ENST00000486828 NUTM1Q86Y26 1132 aa21.96■■□□□ 1.11
PDLIM7-207ENST00000486828 UNC5CLQ8IV45 518 aa21.96■■□□□ 1.11
PDLIM7-207ENST00000486828 MTX1Q13505 466 aa21.95■■□□□ 1.1
PDLIM7-207ENST00000486828 ANAPC15P60006 121 aa21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 KSR2Q6VAB6 950 aa21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 RTN4Q9NQC3 1192 aaKnown RBP21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 MAP3K2Q9Y2U5 619 aa21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 EPB41L2O43491 1005 aaKnown RBP21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 CYP2E1P05181 493 aaPredicted RBP21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 ZC3H6P61129 1189 aaKnown RBP21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 PROSER3Q2NL68 480 aa21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 PI4K2BQ8TCG2 481 aa21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 FBXO41Q8TF61 875 aa21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 HYPKQ9NX55 129 aa21.94■■□□□ 1.1
PDLIM7-207ENST00000486828 ROBO1Q9Y6N7 1651 aa21.93■■□□□ 1.1
PDLIM7-207ENST00000486828 GOLGA6L22H0YM25 854 aa21.93■■□□□ 1.1
PDLIM7-207ENST00000486828 XRCC6P12956 609 aaKnown RBP eCLIP21.93■■□□□ 1.1
PDLIM7-207ENST00000486828 IL17RAQ96F46 866 aa21.93■■□□□ 1.1
PDLIM7-207ENST00000486828 ANO2Q9NQ90 1003 aa21.93■■□□□ 1.1
PDLIM7-207ENST00000486828 ISY1Q9ULR0 285 aaKnown RBP21.93■■□□□ 1.1
PDLIM7-207ENST00000486828 BAG4O95429 457 aaKnown RBP21.92■■□□□ 1.1
PDLIM7-207ENST00000486828 PRAMEF22A3QJZ6 481 aa21.92■■□□□ 1.1
PDLIM7-207ENST00000486828 MCM2P49736 904 aa21.92■■□□□ 1.1
PDLIM7-207ENST00000486828 HDAC5Q9UQL6 1122 aa21.92■■□□□ 1.1
PDLIM7-207ENST00000486828 NEK4P51957 841 aa21.91■■□□□ 1.1
PDLIM7-207ENST00000486828 RAPGEF4Q8WZA2 1011 aa21.91■■□□□ 1.1
PDLIM7-207ENST00000486828 C9orf78Q9NZ63 289 aaPredicted RBP21.9■■□□□ 1.1
PDLIM7-207ENST00000486828 ABCC6O95255 1503 aa21.9■■□□□ 1.1
PDLIM7-207ENST00000486828 SOS2Q07890 1332 aaPredicted RBP21.9■■□□□ 1.1
PDLIM7-207ENST00000486828 USP42Q9H9J4 1324 aaKnown RBP21.9■■□□□ 1.1
PDLIM7-207ENST00000486828 MRE11P49959 708 aa21.9■■□□□ 1.1
PDLIM7-207ENST00000486828 ZGPATQ8N5A5 531 aaKnown RBP21.9■■□□□ 1.1
PDLIM7-207ENST00000486828 DDX21Q9NR30 783 aaKnown RBP eCLIP21.9■■□□□ 1.1
PDLIM7-207ENST00000486828 PALD1Q9ULE6 856 aa21.9■■□□□ 1.1
PDLIM7-207ENST00000486828 AK9Q5TCS8 1911 aa21.9■■□□□ 1.1
PDLIM7-207ENST00000486828 SCN11AQ9UI33 1791 aa21.89■■□□□ 1.09
PDLIM7-207ENST00000486828 NHSL1Q5SYE7 1610 aa21.88■■□□□ 1.09
PDLIM7-207ENST00000486828 DDX58O95786 925 aaKnown RBP21.88■■□□□ 1.09
PDLIM7-207ENST00000486828 ARXQ96QS3 562 aa21.88■■□□□ 1.09
PDLIM7-207ENST00000486828 NLRP2Q9NX02 1062 aa21.88■■□□□ 1.09
PDLIM7-207ENST00000486828 CRYBG1Q9Y4K1 1723 aa21.88■■□□□ 1.09
PDLIM7-207ENST00000486828 COL18A1P39060 1754 aa21.88■■□□□ 1.09
PDLIM7-207ENST00000486828 KDM6AO15550 1401 aaPredicted RBP21.88■■□□□ 1.09
PDLIM7-207ENST00000486828 CNTROBQ8N137 903 aa21.88■■□□□ 1.09
PDLIM7-207ENST00000486828 LINS1Q8NG48 757 aa21.88■■□□□ 1.09
PDLIM7-207ENST00000486828 SLC52A2Q9HAB3 445 aa21.88■■□□□ 1.09
PDLIM7-207ENST00000486828 TTC41PQ6P2S7 1318 aa21.87■■□□□ 1.09
PDLIM7-207ENST00000486828 TATP17735 454 aaPredicted RBP21.87■■□□□ 1.09
PDLIM7-207ENST00000486828 TMX3Q96JJ7 454 aa21.87■■□□□ 1.09
PDLIM7-207ENST00000486828 UTYO14607 1347 aa21.87■■□□□ 1.09
PDLIM7-207ENST00000486828 OS9Q13438 667 aaPredicted RBP21.86■■□□□ 1.09
PDLIM7-207ENST00000486828 PDIA6Q15084 440 aa21.86■■□□□ 1.09
PDLIM7-207ENST00000486828 CWF19L2Q2TBE0 894 aaKnown RBP21.86■■□□□ 1.09
PDLIM7-207ENST00000486828 ZNF790Q6PG37 636 aa21.86■■□□□ 1.09
PDLIM7-207ENST00000486828 IL25Q9H293 177 aa21.86■■□□□ 1.09
PDLIM7-207ENST00000486828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms