RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CHMP4AQ9BY43 222 aa12.31□□□□□ -0.44
MCF2L-227ENST00000486806 LRRC4BQ9NT99 713 aa12.31□□□□□ -0.44
MCF2L-227ENST00000486806 CHPF2Q9P2E5 772 aa12.31□□□□□ -0.44
MCF2L-227ENST00000486806 CNTNAP4Q9C0A0 1308 aa12.31□□□□□ -0.44
MCF2L-227ENST00000486806 STARD3NLO95772 234 aa12.3□□□□□ -0.44
MCF2L-227ENST00000486806 EIF2S2P20042 333 aaKnown RBP12.3□□□□□ -0.44
MCF2L-227ENST00000486806 TXNRD1Q16881 649 aa12.3□□□□□ -0.44
MCF2L-227ENST00000486806 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
MCF2L-227ENST00000486806 MRPL50Q8N5N7 158 aaKnown RBP12.3□□□□□ -0.44
MCF2L-227ENST00000486806 BCL2L13Q9BXK5 485 aa12.3□□□□□ -0.44
MCF2L-227ENST00000486806 SMC4Q9NTJ3 1288 aa12.3□□□□□ -0.44
MCF2L-227ENST00000486806 C4BP0C0L5 1744 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 BCAR3O75815 825 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 KCNQ4P56696 695 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 NBPF14Q5TI25 921 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
MCF2L-227ENST00000486806 ILDR2Q71H61 639 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 NECTIN2Q92692 538 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 CAMKK2Q96RR4 588 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 DDX21Q9NR30 783 aaKnown RBP eCLIP12.29□□□□□ -0.44
MCF2L-227ENST00000486806 DBF4Q9UBU7 674 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-227ENST00000486806 ZBTB1Q9Y2K1 713 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 RNF123Q5XPI4 1314 aa12.29□□□□□ -0.44
MCF2L-227ENST00000486806 TAF1LQ8IZX4 1826 aa12.28□□□□□ -0.44
MCF2L-227ENST00000486806 TCERG1O14776 1098 aaKnown RBP12.28□□□□□ -0.44
MCF2L-227ENST00000486806 A1BGP04217 495 aa12.28□□□□□ -0.44
MCF2L-227ENST00000486806 CRKLP46109 303 aaKnown RBP12.28□□□□□ -0.44
MCF2L-227ENST00000486806 INTS5Q6P9B9 1019 aaKnown RBP12.28□□□□□ -0.44
MCF2L-227ENST00000486806 STK31Q9BXU1 1019 aa12.28□□□□□ -0.44
MCF2L-227ENST00000486806 CCDC87Q9NVE4 849 aa12.28□□□□□ -0.44
MCF2L-227ENST00000486806 KIF16BQ96L93 1317 aa12.28□□□□□ -0.44
MCF2L-227ENST00000486806 ANXA1P04083 346 aa12.27□□□□□ -0.45
MCF2L-227ENST00000486806 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
MCF2L-227ENST00000486806 BAG6P46379 1132 aa12.27□□□□□ -0.45
MCF2L-227ENST00000486806 SF3B2Q13435 895 aaKnown RBP12.27□□□□□ -0.45
MCF2L-227ENST00000486806 RC3H1Q5TC82 1133 aaKnown RBP12.27□□□□□ -0.45
MCF2L-227ENST00000486806 UPF1Q92900 1129 aaKnown RBP eCLIP12.27□□□□□ -0.45
MCF2L-227ENST00000486806 KAT6BQ8WYB5 2073 aa12.26□□□□□ -0.45
MCF2L-227ENST00000486806 NUP188Q5SRE5 1749 aa12.26□□□□□ -0.45
MCF2L-227ENST00000486806 PIP4K2AP48426 406 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-227ENST00000486806 EN1Q05925 392 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-227ENST00000486806 FLIIQ13045 1269 aa12.26□□□□□ -0.45
MCF2L-227ENST00000486806 EZH2Q15910 746 aaKnown RBP12.26□□□□□ -0.45
MCF2L-227ENST00000486806 G2E3Q7L622 706 aa12.26□□□□□ -0.45
MCF2L-227ENST00000486806 DEFB132Q7Z7B7 95 aa12.26□□□□□ -0.45
MCF2L-227ENST00000486806 HYPKQ9NX55 129 aa12.26□□□□□ -0.45
MCF2L-227ENST00000486806 IL6STP40189 918 aaPredicted RBP12.25□□□□□ -0.45
MCF2L-227ENST00000486806 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
MCF2L-227ENST00000486806 RRP1P56182 461 aaKnown RBP12.25□□□□□ -0.45
MCF2L-227ENST00000486806 PHAXQ9H814 394 aaKnown RBP12.25□□□□□ -0.45
MCF2L-227ENST00000486806 PTPRCP08575 1304 aa12.25□□□□□ -0.45
MCF2L-227ENST00000486806 MYL6BP14649 208 aa12.24□□□□□ -0.45
MCF2L-227ENST00000486806 HMGB2P26583 209 aaKnown RBP12.24□□□□□ -0.45
MCF2L-227ENST00000486806 COL15A1P39059 1388 aa12.24□□□□□ -0.45
MCF2L-227ENST00000486806 MYH14Q7Z406 1995 aaKnown RBP12.24□□□□□ -0.45
MCF2L-227ENST00000486806 AMIGO3Q86WK7 504 aa12.24□□□□□ -0.45
MCF2L-227ENST00000486806 ARHGAP45Q92619 1136 aa12.24□□□□□ -0.45
MCF2L-227ENST00000486806 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
MCF2L-227ENST00000486806 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
MCF2L-227ENST00000486806 PXDNLA1KZ92 1463 aa12.23□□□□□ -0.45
MCF2L-227ENST00000486806 ADCY9O60503 1353 aa12.23□□□□□ -0.45
MCF2L-227ENST00000486806 GNPATO15228 680 aa12.23□□□□□ -0.45
MCF2L-227ENST00000486806 TRIM27P14373 513 aa12.23□□□□□ -0.45
MCF2L-227ENST00000486806 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
MCF2L-227ENST00000486806 ZNF827Q17R98 1081 aa12.23□□□□□ -0.45
MCF2L-227ENST00000486806 XAGE3Q8WTP9 111 aa12.23□□□□□ -0.45
MCF2L-227ENST00000486806 ABCC4O15439 1325 aa12.22□□□□□ -0.45
MCF2L-227ENST00000486806 RPS6KA4O75676 772 aa12.22□□□□□ -0.45
MCF2L-227ENST00000486806 ZKSCAN2Q63HK3 967 aa12.22□□□□□ -0.45
MCF2L-227ENST00000486806 ATF7IPQ6VMQ6 1270 aa12.22□□□□□ -0.45
MCF2L-227ENST00000486806 COPS6Q7L5N1 327 aa12.22□□□□□ -0.45
MCF2L-227ENST00000486806 FRAT1Q92837 279 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-227ENST00000486806 AK7Q96M32 723 aa12.22□□□□□ -0.45
MCF2L-227ENST00000486806 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-227ENST00000486806 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
MCF2L-227ENST00000486806 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
MCF2L-227ENST00000486806 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.45
MCF2L-227ENST00000486806 IPO8O15397 1037 aaKnown RBP12.21□□□□□ -0.45
MCF2L-227ENST00000486806 PLIN1O60240 522 aa12.21□□□□□ -0.45
MCF2L-227ENST00000486806 ADRA2BP18089 450 aa12.21□□□□□ -0.45
MCF2L-227ENST00000486806 SSFA2P28290 1259 aa12.21□□□□□ -0.45
MCF2L-227ENST00000486806 FKBP5Q13451 457 aaPredicted RBP12.21□□□□□ -0.45
MCF2L-227ENST00000486806 TTLL7Q6ZT98 887 aa12.21□□□□□ -0.45
MCF2L-227ENST00000486806 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.21□□□□□ -0.45
MCF2L-227ENST00000486806 TNNQ9UQP3 1299 aa12.21□□□□□ -0.45
MCF2L-227ENST00000486806 ATP10DQ9P241 1426 aa12.2□□□□□ -0.46
MCF2L-227ENST00000486806 BCORQ6W2J9 1755 aa12.2□□□□□ -0.46
MCF2L-227ENST00000486806 C4AP0C0L4 1744 aa12.2□□□□□ -0.46
MCF2L-227ENST00000486806 CACNA1FO60840 1977 aa12.2□□□□□ -0.46
MCF2L-227ENST00000486806 API5Q9BZZ5 524 aaKnown RBP12.2□□□□□ -0.46
MCF2L-227ENST00000486806 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
MCF2L-227ENST00000486806 MAP3K15Q6ZN16 1313 aa12.19□□□□□ -0.46
MCF2L-227ENST00000486806 TUBGCP6Q96RT7 1819 aa12.19□□□□□ -0.46
MCF2L-227ENST00000486806 PI4KAP2A4QPH2 592 aa12.19□□□□□ -0.46
MCF2L-227ENST00000486806 RGL2O15211 777 aa12.19□□□□□ -0.46
MCF2L-227ENST00000486806 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
MCF2L-227ENST00000486806 DDX58O95786 925 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms