RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 EIF2S2P20042 333 aaKnown RBP14.85□□□□□ -0.03
PKP4-213ENST00000486254 MTX1Q13505 466 aa14.85□□□□□ -0.03
PKP4-213ENST00000486254 KSR2Q6VAB6 950 aa14.85□□□□□ -0.03
PKP4-213ENST00000486254 SSH3Q8TE77 659 aa14.85□□□□□ -0.03
PKP4-213ENST00000486254 PLEKHG5O94827 1062 aa14.85□□□□□ -0.03
PKP4-213ENST00000486254 IL2RBP14784 551 aa14.85□□□□□ -0.03
PKP4-213ENST00000486254 NECTIN2Q92692 538 aa14.85□□□□□ -0.03
PKP4-213ENST00000486254 TUBGCP6Q96RT7 1819 aa14.85□□□□□ -0.03
PKP4-213ENST00000486254 LRP6O75581 1613 aa14.84□□□□□ -0.03
PKP4-213ENST00000486254 TNS2Q63HR2 1409 aa14.84□□□□□ -0.03
PKP4-213ENST00000486254 UTYO14607 1347 aa14.84□□□□□ -0.03
PKP4-213ENST00000486254 PI4KAP2A4QPH2 592 aa14.84□□□□□ -0.03
PKP4-213ENST00000486254 SNRPA1P09661 255 aaKnown RBP14.84□□□□□ -0.03
PKP4-213ENST00000486254 RBM25P49756 843 aaKnown RBP14.84□□□□□ -0.03
PKP4-213ENST00000486254 POLA2Q14181 598 aa14.84□□□□□ -0.03
PKP4-213ENST00000486254 BECN1Q14457 450 aa14.84□□□□□ -0.03
PKP4-213ENST00000486254 TTC22Q5TAA0 569 aa14.84□□□□□ -0.03
PKP4-213ENST00000486254 TOM1L2Q6ZVM7 507 aa14.84□□□□□ -0.03
PKP4-213ENST00000486254 PI4KAP1Q8N8J0 262 aa14.84□□□□□ -0.03
PKP4-213ENST00000486254 ZCRB1Q8TBF4 217 aaKnown RBP14.84□□□□□ -0.03
PKP4-213ENST00000486254 FMNL2Q96PY5 1086 aa14.84□□□□□ -0.03
PKP4-213ENST00000486254 AOX1Q06278 1338 aa14.83□□□□□ -0.04
PKP4-213ENST00000486254 RAB11FIP3O75154 756 aa14.83□□□□□ -0.04
PKP4-213ENST00000486254 CDC45O75419 566 aa14.83□□□□□ -0.04
PKP4-213ENST00000486254 PDIA6Q15084 440 aa14.83□□□□□ -0.04
PKP4-213ENST00000486254 TTC5Q8N0Z6 440 aa14.83□□□□□ -0.04
PKP4-213ENST00000486254 NFATC2IPQ8NCF5 419 aa14.83□□□□□ -0.04
PKP4-213ENST00000486254 COL15A1P39059 1388 aa14.83□□□□□ -0.04
PKP4-213ENST00000486254 SALL3Q9BXA9 1300 aa14.82□□□□□ -0.04
PKP4-213ENST00000486254 LINS1Q8NG48 757 aa14.82□□□□□ -0.04
PKP4-213ENST00000486254 DAXXQ9UER7 740 aaPredicted RBP14.82□□□□□ -0.04
PKP4-213ENST00000486254 LRRFIP2Q9Y608 721 aaKnown RBP14.82□□□□□ -0.04
PKP4-213ENST00000486254 DISP2A7MBM2 1401 aa14.82□□□□□ -0.04
PKP4-213ENST00000486254 COL16A1Q07092 1604 aaPredicted RBP14.82□□□□□ -0.04
PKP4-213ENST00000486254 WNK3Q9BYP7 1800 aa14.82□□□□□ -0.04
PKP4-213ENST00000486254 C22orf23Q9BZE7 217 aa14.81□□□□□ -0.04
PKP4-213ENST00000486254 KCPQ6ZWJ8 1503 aa14.81□□□□□ -0.04
PKP4-213ENST00000486254 CABP4P57796 275 aa14.81□□□□□ -0.04
PKP4-213ENST00000486254 HSP90AB4PQ58FF6 505 aa14.81□□□□□ -0.04
PKP4-213ENST00000486254 ZNF496Q96IT1 587 aaPredicted RBP14.81□□□□□ -0.04
PKP4-213ENST00000486254 LRRCC1Q9C099 1032 aa14.81□□□□□ -0.04
PKP4-213ENST00000486254 PNMA6EA0A0J9YXQ4 647 aa14.8□□□□□ -0.04
PKP4-213ENST00000486254 GSPT1P15170 499 aaKnown RBP14.8□□□□□ -0.04
PKP4-213ENST00000486254 LRP10Q7Z4F1 713 aa14.8□□□□□ -0.04
PKP4-213ENST00000486254 STAP2Q9UGK3 403 aa14.8□□□□□ -0.04
PKP4-213ENST00000486254 TOGARAM1Q9Y4F4 1720 aa14.79□□□□□ -0.04
PKP4-213ENST00000486254 PROSER3Q2NL68 480 aa14.79□□□□□ -0.04
PKP4-213ENST00000486254 LARP1Q6PKG0 1096 aaKnown RBP14.79□□□□□ -0.04
PKP4-213ENST00000486254 TBC1D9Q6ZT07 1266 aa14.79□□□□□ -0.04
PKP4-213ENST00000486254 MAP3K2Q9Y2U5 619 aa14.79□□□□□ -0.04
PKP4-213ENST00000486254 USP35Q9P2H5 1018 aa14.78□□□□□ -0.04
PKP4-213ENST00000486254 ARFGEF2Q9Y6D5 1785 aa14.78□□□□□ -0.04
PKP4-213ENST00000486254 PDE1AP54750 535 aa14.77□□□□□ -0.04
PKP4-213ENST00000486254 MFAP1P55081 439 aaKnown RBP14.77□□□□□ -0.04
PKP4-213ENST00000486254 SLC39A6Q13433 755 aa14.77□□□□□ -0.04
PKP4-213ENST00000486254 NBPF7P0C2Y1 421 aaPredicted RBP14.77□□□□□ -0.05
PKP4-213ENST00000486254 EVA1CP58658 441 aa14.77□□□□□ -0.05
PKP4-213ENST00000486254 CASC1Q6TDU7 716 aa14.77□□□□□ -0.05
PKP4-213ENST00000486254 PPP1R42Q7Z4L9 355 aa14.77□□□□□ -0.05
PKP4-213ENST00000486254 NRAPQ86VF7 1730 aa14.76□□□□□ -0.05
PKP4-213ENST00000486254 PRAMEF22A3QJZ6 481 aa14.76□□□□□ -0.05
PKP4-213ENST00000486254 GRM8O00222 908 aa14.76□□□□□ -0.05
PKP4-213ENST00000486254 NEXNQ0ZGT2 675 aa14.76□□□□□ -0.05
PKP4-213ENST00000486254 METTL22Q9BUU2 404 aaPredicted RBP14.76□□□□□ -0.05
PKP4-213ENST00000486254 NUP188Q5SRE5 1749 aa14.76□□□□□ -0.05
PKP4-213ENST00000486254 NWD2Q9ULI1 1742 aa14.76□□□□□ -0.05
PKP4-213ENST00000486254 USP42Q9H9J4 1324 aaKnown RBP14.75□□□□□ -0.05
PKP4-213ENST00000486254 ANXA1P04083 346 aa14.75□□□□□ -0.05
PKP4-213ENST00000486254 SNX21Q969T3 373 aa14.75□□□□□ -0.05
PKP4-213ENST00000486254 KIF1BPQ96EK5 621 aa14.75□□□□□ -0.05
PKP4-213ENST00000486254 CDCA7Q9BWT1 371 aaPredicted RBP14.75□□□□□ -0.05
PKP4-213ENST00000486254 EXOC6BQ9Y2D4 811 aa14.75□□□□□ -0.05
PKP4-213ENST00000486254 PHLPP1O60346 1717 aa14.75□□□□□ -0.05
PKP4-213ENST00000486254 SRGAP3O43295 1099 aa14.74□□□□□ -0.05
PKP4-213ENST00000486254 EPB41L2O43491 1005 aaKnown RBP14.74□□□□□ -0.05
PKP4-213ENST00000486254 MX1P20591 662 aa14.74□□□□□ -0.05
PKP4-213ENST00000486254 ERC1Q8IUD2 1116 aa14.74□□□□□ -0.05
PKP4-213ENST00000486254 C9orf78Q9NZ63 289 aaPredicted RBP14.74□□□□□ -0.05
PKP4-213ENST00000486254 SDSP20132 328 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 C16orf71Q8IYS4 520 aaPredicted RBP14.73□□□□□ -0.05
PKP4-213ENST00000486254 VSIG10Q8N0Z9 540 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 IL27Q8NEV9 243 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 OTUD7AQ8TE49 926 aaPredicted RBP14.73□□□□□ -0.05
PKP4-213ENST00000486254 ITGB4P16144 1822 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 AFDNP55196 1824 aaKnown RBP14.73□□□□□ -0.05
PKP4-213ENST00000486254 NEURL1BA8MQ27 555 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 SMARCA5O60264 1052 aaPredicted RBP14.73□□□□□ -0.05
PKP4-213ENST00000486254 ANKRD13DQ6ZTN6 518 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 RIC3Q7Z5B4 369 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 PLBD2Q8NHP8 589 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 XAGE3Q8WTP9 111 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 STRN4Q9NRL3 753 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 BTG4Q9NY30 223 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 USP16Q9Y5T5 823 aa14.73□□□□□ -0.05
PKP4-213ENST00000486254 REC8O95072 547 aa14.72□□□□□ -0.05
PKP4-213ENST00000486254 IGKV5-2P06315 115 aa14.72□□□□□ -0.05
PKP4-213ENST00000486254 COPS6Q7L5N1 327 aa14.72□□□□□ -0.05
PKP4-213ENST00000486254 PIAS4Q8N2W9 510 aaPredicted RBP14.72□□□□□ -0.05
PKP4-213ENST00000486254 RHPN1Q8TCX5 695 aa14.72□□□□□ -0.05
PKP4-213ENST00000486254 TEX13AQ9BXU3 409 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms