RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 PTF1AQ7RTS3 328 aa14.53□□□□□ -0.08
SND1-212ENST00000485871 TTC5Q8N0Z6 440 aa14.53□□□□□ -0.08
SND1-212ENST00000485871 FMNL2Q96PY5 1086 aa14.53□□□□□ -0.08
SND1-212ENST00000485871 TCERG1O14776 1098 aaKnown RBP14.52□□□□□ -0.09
SND1-212ENST00000485871 PLIN1O60240 522 aa14.52□□□□□ -0.09
SND1-212ENST00000485871 SLC4A9Q96Q91 983 aa14.52□□□□□ -0.09
SND1-212ENST00000485871 TAF1LQ8IZX4 1826 aa14.52□□□□□ -0.09
SND1-212ENST00000485871 TNS1Q9HBL0 1735 aaKnown RBP14.52□□□□□ -0.09
SND1-212ENST00000485871 KIF16BQ96L93 1317 aa14.51□□□□□ -0.09
SND1-212ENST00000485871 SNRPA1P09661 255 aaKnown RBP14.51□□□□□ -0.09
SND1-212ENST00000485871 HDGFL1Q5TGJ6 251 aa14.51□□□□□ -0.09
SND1-212ENST00000485871 CCDC30Q5VVM6 783 aa14.51□□□□□ -0.09
SND1-212ENST00000485871 SYTL4Q96C24 671 aaPredicted RBP14.51□□□□□ -0.09
SND1-212ENST00000485871 SPON1Q9HCB6 807 aa14.51□□□□□ -0.09
SND1-212ENST00000485871 TNNQ9UQP3 1299 aa14.51□□□□□ -0.09
SND1-212ENST00000485871 C20orf194Q5TEA3 1177 aa14.5□□□□□ -0.09
SND1-212ENST00000485871 USP16Q9Y5T5 823 aa14.5□□□□□ -0.09
SND1-212ENST00000485871 MYH14Q7Z406 1995 aaKnown RBP14.49□□□□□ -0.09
SND1-212ENST00000485871 PDIA6Q15084 440 aa14.49□□□□□ -0.09
SND1-212ENST00000485871 G2E3Q7L622 706 aa14.49□□□□□ -0.09
SND1-212ENST00000485871 LRP10Q7Z4F1 713 aa14.49□□□□□ -0.09
SND1-212ENST00000485871 VSIG10Q8N0Z9 540 aa14.49□□□□□ -0.09
SND1-212ENST00000485871 NOB1Q9ULX3 412 aaKnown RBP14.49□□□□□ -0.09
SND1-212ENST00000485871 PALLDQ8WX93 1383 aa14.48□□□□□ -0.09
SND1-212ENST00000485871 PTCD1O75127 700 aaKnown RBP14.48□□□□□ -0.09
SND1-212ENST00000485871 TRIM27P14373 513 aa14.48□□□□□ -0.09
SND1-212ENST00000485871 EIF2S2P20042 333 aaKnown RBP14.48□□□□□ -0.09
SND1-212ENST00000485871 IRX6P78412 446 aaPredicted RBP14.48□□□□□ -0.09
SND1-212ENST00000485871 PDE3AQ14432 1141 aa14.48□□□□□ -0.09
SND1-212ENST00000485871 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
SND1-212ENST00000485871 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.48□□□□□ -0.09
SND1-212ENST00000485871 ARHGAP45Q92619 1136 aa14.48□□□□□ -0.09
SND1-212ENST00000485871 NECTIN2Q92692 538 aa14.48□□□□□ -0.09
SND1-212ENST00000485871 NUP188Q5SRE5 1749 aa14.47□□□□□ -0.09
SND1-212ENST00000485871 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
SND1-212ENST00000485871 RLBP1P12271 317 aa14.47□□□□□ -0.09
SND1-212ENST00000485871 PROSER3Q2NL68 480 aa14.47□□□□□ -0.09
SND1-212ENST00000485871 ATF7IPQ6VMQ6 1270 aa14.47□□□□□ -0.09
SND1-212ENST00000485871 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
SND1-212ENST00000485871 RGPD3A6NKT7 1758 aaPredicted RBP14.47□□□□□ -0.09
SND1-212ENST00000485871 RGPD4Q7Z3J3 1758 aa14.47□□□□□ -0.09
SND1-212ENST00000485871 ARFGEF2Q9Y6D5 1785 aa14.47□□□□□ -0.09
SND1-212ENST00000485871 ERBB4Q15303 1308 aa14.46□□□□□ -0.09
SND1-212ENST00000485871 DNAJC10Q8IXB1 793 aa14.46□□□□□ -0.09
SND1-212ENST00000485871 FRAT1Q92837 279 aaPredicted RBP14.46□□□□□ -0.09
SND1-212ENST00000485871 SMARCC1Q92922 1105 aaPredicted RBP14.46□□□□□ -0.09
SND1-212ENST00000485871 STK31Q9BXU1 1019 aa14.46□□□□□ -0.09
SND1-212ENST00000485871 CHMP4AQ9BY43 222 aa14.46□□□□□ -0.09
SND1-212ENST00000485871 DBF4Q9UBU7 674 aaPredicted RBP14.46□□□□□ -0.09
SND1-212ENST00000485871 ABCC4O15439 1325 aa14.45□□□□□ -0.1
SND1-212ENST00000485871 PTPRCP08575 1304 aa14.45□□□□□ -0.1
SND1-212ENST00000485871 NBPF26B4DH59 902 aa14.45□□□□□ -0.1
SND1-212ENST00000485871 ANXA1P04083 346 aa14.45□□□□□ -0.1
SND1-212ENST00000485871 NBPF10Q6P3W6 841 aaKnown RBP14.45□□□□□ -0.1
SND1-212ENST00000485871 NBPF15Q8N660 670 aa14.45□□□□□ -0.1
SND1-212ENST00000485871 BCL11BQ9C0K0 894 aaPredicted RBP14.45□□□□□ -0.1
SND1-212ENST00000485871 DDX21Q9NR30 783 aaKnown RBP eCLIP14.45□□□□□ -0.1
SND1-212ENST00000485871 LOC102724428A0A0B4J2F2 783 aa14.44□□□□□ -0.1
SND1-212ENST00000485871 IPO8O15397 1037 aaKnown RBP14.44□□□□□ -0.1
SND1-212ENST00000485871 SIK1P57059 783 aa14.44□□□□□ -0.1
SND1-212ENST00000485871 FLIIQ13045 1269 aa14.44□□□□□ -0.1
SND1-212ENST00000485871 ITPK1Q13572 414 aa14.44□□□□□ -0.1
SND1-212ENST00000485871 RBM42Q9BTD8 480 aaKnown RBP14.44□□□□□ -0.1
SND1-212ENST00000485871 TEX13AQ9BXU3 409 aaPredicted RBP14.44□□□□□ -0.1
SND1-212ENST00000485871 PHAXQ9H814 394 aaKnown RBP14.44□□□□□ -0.1
SND1-212ENST00000485871 PPP4R2Q9NY27 417 aa14.44□□□□□ -0.1
SND1-212ENST00000485871 PXDNLA1KZ92 1463 aa14.44□□□□□ -0.1
SND1-212ENST00000485871 CYP19A1P11511 503 aaPredicted RBP14.43□□□□□ -0.1
SND1-212ENST00000485871 ZNF784Q8NCA9 323 aaPredicted RBP14.43□□□□□ -0.1
SND1-212ENST00000485871 PANK1Q8TE04 598 aa14.43□□□□□ -0.1
SND1-212ENST00000485871 CRBNQ96SW2 442 aa14.43□□□□□ -0.1
SND1-212ENST00000485871 API5Q9BZZ5 524 aaKnown RBP14.43□□□□□ -0.1
SND1-212ENST00000485871 IFFO2Q5TF58 517 aa14.42□□□□□ -0.1
SND1-212ENST00000485871 DZIP1LQ8IYY4 767 aaKnown RBP14.42□□□□□ -0.1
SND1-212ENST00000485871 CLUAP1Q96AJ1 413 aa14.42□□□□□ -0.1
SND1-212ENST00000485871 HYPKQ9NX55 129 aa14.42□□□□□ -0.1
SND1-212ENST00000485871 ADCY9O60503 1353 aa14.42□□□□□ -0.1
SND1-212ENST00000485871 A1BGP04217 495 aa14.41□□□□□ -0.1
SND1-212ENST00000485871 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
SND1-212ENST00000485871 EXOC6Q8TAG9 804 aa14.41□□□□□ -0.1
SND1-212ENST00000485871 C4BP0C0L5 1744 aa14.41□□□□□ -0.1
SND1-212ENST00000485871 ANKRD36CQ5JPF3 1778 aa14.4□□□□□ -0.1
SND1-212ENST00000485871 BCORQ6W2J9 1755 aa14.4□□□□□ -0.1
SND1-212ENST00000485871 MS4A1P11836 297 aa14.4□□□□□ -0.1
SND1-212ENST00000485871 ATP6V1AP38606 617 aa14.4□□□□□ -0.1
SND1-212ENST00000485871 PIP4K2AP48426 406 aaPredicted RBP14.4□□□□□ -0.1
SND1-212ENST00000485871 TMEM57Q8N5G2 664 aa14.4□□□□□ -0.1
SND1-212ENST00000485871 AFDNP55196 1824 aaKnown RBP14.39□□□□□ -0.11
SND1-212ENST00000485871 STARD3NLO95772 234 aa14.39□□□□□ -0.11
SND1-212ENST00000485871 MYL6BP14649 208 aa14.39□□□□□ -0.11
SND1-212ENST00000485871 MVPQ14764 893 aaKnown RBP14.39□□□□□ -0.11
SND1-212ENST00000485871 INTS3Q68E01 1043 aaKnown RBP14.39□□□□□ -0.11
SND1-212ENST00000485871 INTS5Q6P9B9 1019 aaKnown RBP14.39□□□□□ -0.11
SND1-212ENST00000485871 COG6Q9Y2V7 657 aa14.39□□□□□ -0.11
SND1-212ENST00000485871 UBR3Q6ZT12 1888 aa14.39□□□□□ -0.11
SND1-212ENST00000485871 NUP98P52948 1817 aa14.38□□□□□ -0.11
SND1-212ENST00000485871 F6X3S4 739 aa14.38□□□□□ -0.11
SND1-212ENST00000485871 FKBP5Q13451 457 aaPredicted RBP14.38□□□□□ -0.11
SND1-212ENST00000485871 LINC00116Q8NCU8 138 aa14.38□□□□□ -0.11
SND1-212ENST00000485871 XAGE3Q8WTP9 111 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms