RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 DCAF5Q96JK2 942 aa14.46□□□□□ -0.09
HMGN1-215ENST00000485550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.46□□□□□ -0.098e-8■■□□□ 13
HMGN1-215ENST00000485550 KNSTRNQ9Y448 316 aa14.46□□□□□ -0.09
HMGN1-215ENST00000485550 RPS6KA4O75676 772 aa14.45□□□□□ -0.1
HMGN1-215ENST00000485550 HSPA1AP0DMV8 641 aaKnown RBP14.45□□□□□ -0.1
HMGN1-215ENST00000485550 HSPA1BP0DMV9 641 aaKnown RBP14.45□□□□□ -0.1
HMGN1-215ENST00000485550 CHRNA5P30532 468 aa14.45□□□□□ -0.1
HMGN1-215ENST00000485550 DALRD3Q5D0E6 543 aaKnown RBP14.45□□□□□ -0.1
HMGN1-215ENST00000485550 TIAM2Q8IVF5 1701 aa14.45□□□□□ -0.1
HMGN1-215ENST00000485550 SMC1BQ8NDV3 1235 aa14.45□□□□□ -0.1
HMGN1-215ENST00000485550 CNTNAP4Q9C0A0 1308 aa14.44□□□□□ -0.1
HMGN1-215ENST00000485550 RC3H1Q5TC82 1133 aaKnown RBP14.44□□□□□ -0.1
HMGN1-215ENST00000485550 SRP68Q9UHB9 627 aaKnown RBP14.44□□□□□ -0.1
HMGN1-215ENST00000485550 VIRMAQ69YN4 1812 aaKnown RBP14.43□□□□□ -0.1
HMGN1-215ENST00000485550 RASSF7Q02833 373 aa14.43□□□□□ -0.1
HMGN1-215ENST00000485550 TJP1Q07157 1748 aa14.43□□□□□ -0.1
HMGN1-215ENST00000485550 DDR1Q08345 913 aa14.42□□□□□ -0.1
HMGN1-215ENST00000485550 FKBP8Q14318 412 aa14.42□□□□□ -0.1
HMGN1-215ENST00000485550 PLEKHO1Q53GL0 409 aaPredicted RBP14.42□□□□□ -0.1
HMGN1-215ENST00000485550 AEBP1Q8IUX7 1158 aa14.42□□□□□ -0.1
HMGN1-215ENST00000485550 DLEC1Q9Y238 1755 aa14.42□□□□□ -0.1
HMGN1-215ENST00000485550 DICER1Q9UPY3 1922 aaKnown RBP14.41□□□□□ -0.1
HMGN1-215ENST00000485550 CNGB1Q14028 1251 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-215ENST00000485550 ADAMTS7Q9UKP4 1686 aa14.41□□□□□ -0.1
HMGN1-215ENST00000485550 KIF7Q2M1P5 1343 aa14.41□□□□□ -0.1
HMGN1-215ENST00000485550 ERVV-2B6SEH9 535 aa14.4□□□□□ -0.1
HMGN1-215ENST00000485550 PTCD1O75127 700 aaKnown RBP14.4□□□□□ -0.1
HMGN1-215ENST00000485550 SULT6B1Q6IMI4 303 aa14.4□□□□□ -0.1
HMGN1-215ENST00000485550 ZNF530Q6P9A1 599 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-215ENST00000485550 CRKLP46109 303 aaKnown RBP14.39□□□□□ -0.11
HMGN1-215ENST00000485550 AMER1Q5JTC6 1135 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-215ENST00000485550 KDM6AO15550 1401 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-215ENST00000485550 USP42Q9H9J4 1324 aaKnown RBP14.39□□□□□ -0.11
HMGN1-215ENST00000485550 CACNA1SQ13698 1873 aa14.38□□□□□ -0.11
HMGN1-215ENST00000485550 SCN11AQ9UI33 1791 aa14.38□□□□□ -0.11
HMGN1-215ENST00000485550 IL13P35225 146 aa14.38□□□□□ -0.11
HMGN1-215ENST00000485550 CABP4P57796 275 aa14.38□□□□□ -0.11
HMGN1-215ENST00000485550 AMOTQ4VCS5 1084 aa14.38□□□□□ -0.11
HMGN1-215ENST00000485550 CC2D1BQ5T0F9 858 aaKnown RBP14.38□□□□□ -0.11
HMGN1-215ENST00000485550 GLTPD2A6NH11 291 aa14.37□□□□□ -0.11
HMGN1-215ENST00000485550 POLRMTO00411 1230 aaKnown RBP14.37□□□□□ -0.11
HMGN1-215ENST00000485550 HSP90AB1P08238 724 aaKnown RBP14.37□□□□□ -0.11
HMGN1-215ENST00000485550 VEGFAP15692 232 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-215ENST00000485550 MTHFSP49914 203 aa14.37□□□□□ -0.11
HMGN1-215ENST00000485550 NRXN2Q9P2S2 1712 aa14.37□□□□□ -0.11
HMGN1-215ENST00000485550 C1orf141Q5JVX7 400 aa14.36□□□□□ -0.11
HMGN1-215ENST00000485550 ZC3H4Q9UPT8 1303 aaKnown RBP14.36□□□□□ -0.11
HMGN1-215ENST00000485550 FER1L6Q2WGJ9 1857 aa14.34□□□□□ -0.11
HMGN1-215ENST00000485550 PER1O15534 1290 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-215ENST00000485550 HMOX1P09601 288 aa14.34□□□□□ -0.11
HMGN1-215ENST00000485550 LMNB1P20700 586 aa14.34□□□□□ -0.11
HMGN1-215ENST00000485550 TM4SF1P30408 202 aa14.34□□□□□ -0.11
HMGN1-215ENST00000485550 USPL1Q5W0Q7 1092 aa14.34□□□□□ -0.11
HMGN1-215ENST00000485550 NFATC2IPQ8NCF5 419 aa14.34□□□□□ -0.11
HMGN1-215ENST00000485550 ANKRD31Q8N7Z5 1873 aa14.33□□□□□ -0.11
HMGN1-215ENST00000485550 POTECB2RU33 542 aa14.33□□□□□ -0.12
HMGN1-215ENST00000485550 ZPR1O75312 459 aa14.33□□□□□ -0.12
HMGN1-215ENST00000485550 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
HMGN1-215ENST00000485550 INTS5Q6P9B9 1019 aaKnown RBP14.32□□□□□ -0.12
HMGN1-215ENST00000485550 MKRN1Q9UHC7 482 aaKnown RBP14.32□□□□□ -0.12
HMGN1-215ENST00000485550 NFIXQ14938 502 aa14.31□□□□□ -0.12
HMGN1-215ENST00000485550 PIP4P2Q8N4L2 257 aa14.31□□□□□ -0.12
HMGN1-215ENST00000485550 LGR6Q9HBX8 967 aa14.31□□□□□ -0.12
HMGN1-215ENST00000485550 NFKBIEO00221 500 aa14.3□□□□□ -0.12
HMGN1-215ENST00000485550 DIAPH1O60610 1272 aaKnown RBP14.3□□□□□ -0.12
HMGN1-215ENST00000485550 DNAJC10Q8IXB1 793 aa14.3□□□□□ -0.12
HMGN1-215ENST00000485550 TTLL6Q8N841 843 aa14.3□□□□□ -0.12
HMGN1-215ENST00000485550 COL11A2P13942 1736 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-215ENST00000485550 FOXN1O15353 648 aa14.29□□□□□ -0.12
HMGN1-215ENST00000485550 AKAP4Q5JQC9 854 aa14.29□□□□□ -0.12
HMGN1-215ENST00000485550 C2CD5Q86YS7 1000 aa14.29□□□□□ -0.12
HMGN1-215ENST00000485550 SOS1Q07889 1333 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-215ENST00000485550 CARMIL3Q8ND23 1372 aa14.29□□□□□ -0.12
HMGN1-215ENST00000485550 SERPINB2P05120 415 aa14.28□□□□□ -0.12
HMGN1-215ENST00000485550 POTEIP0CG38 1075 aa14.28□□□□□ -0.12
HMGN1-215ENST00000485550 POTEJP0CG39 1038 aa14.28□□□□□ -0.12
HMGN1-215ENST00000485550 MTHFSDQ2M296 383 aaKnown RBP14.28□□□□□ -0.12
HMGN1-215ENST00000485550 DPY19L2Q6NUT2 758 aa14.28□□□□□ -0.12
HMGN1-215ENST00000485550 SLX4Q8IY92 1834 aa14.27□□□□□ -0.12
HMGN1-215ENST00000485550 COL15A1P39059 1388 aa14.27□□□□□ -0.12
HMGN1-215ENST00000485550 U2SURPO15042 1029 aaKnown RBP14.27□□□□□ -0.13
HMGN1-215ENST00000485550 SLC39A6Q13433 755 aa14.27□□□□□ -0.13
HMGN1-215ENST00000485550 BCL2L12Q9HB09 334 aa14.27□□□□□ -0.13
HMGN1-215ENST00000485550 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
HMGN1-215ENST00000485550 NARFQ9UHQ1 456 aa14.27□□□□□ -0.13
HMGN1-215ENST00000485550 H0YIN7 160 aa14.26□□□□□ -0.13
HMGN1-215ENST00000485550 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
HMGN1-215ENST00000485550 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-215ENST00000485550 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
HMGN1-215ENST00000485550 SLC52A2Q9HAB3 445 aa14.26□□□□□ -0.13
HMGN1-215ENST00000485550 ZBTB1Q9Y2K1 713 aa14.26□□□□□ -0.13
HMGN1-215ENST00000485550 SCN4AP35499 1836 aa14.25□□□□□ -0.13
HMGN1-215ENST00000485550 ERFEQ4G0M1 354 aa14.25□□□□□ -0.13
HMGN1-215ENST00000485550 BICDL1Q6ZP65 573 aa14.25□□□□□ -0.13
HMGN1-215ENST00000485550 ZNF622Q969S3 477 aaKnown RBP eCLIP14.25□□□□□ -0.13
HMGN1-215ENST00000485550 ARFGEF2Q9Y6D5 1785 aa14.24□□□□□ -0.13
HMGN1-215ENST00000485550 C21orf2O43822 256 aa14.24□□□□□ -0.13
HMGN1-215ENST00000485550 CYP19A1P11511 503 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-215ENST00000485550 CNTNAP1P78357 1384 aa14.23□□□□□ -0.13
HMGN1-215ENST00000485550 DDNO94850 711 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms