RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ATXN7L1Q9ULK2 861 aaPredicted RBP8.81□□□□□ -1
SMC4-215ENST00000484799 BCRP11274 1271 aa8.8□□□□□ -1
SMC4-215ENST00000484799 MTFR1Q15390 333 aa8.8□□□□□ -1
SMC4-215ENST00000484799 PODNQ7Z5L7 613 aa8.8□□□□□ -1
SMC4-215ENST00000484799 NLRP8Q86W28 1048 aa8.8□□□□□ -1
SMC4-215ENST00000484799 ADAMTS19Q8TE59 1207 aa8.8□□□□□ -1
SMC4-215ENST00000484799 CRISPLD1Q9H336 500 aa8.8□□□□□ -1
SMC4-215ENST00000484799 PCDHGC4Q9Y5F7 938 aa8.8□□□□□ -1
SMC4-215ENST00000484799 PARP3Q9Y6F1 533 aa8.8□□□□□ -1
SMC4-215ENST00000484799 A0A1W2PNR3 127 aa8.79□□□□□ -1
SMC4-215ENST00000484799 TNS4Q8IZW8 715 aa8.79□□□□□ -1
SMC4-215ENST00000484799 ZCCHC2Q9C0B9 1178 aaKnown RBP8.79□□□□□ -1
SMC4-215ENST00000484799 SCHIP1Q9P0W5 487 aaPredicted RBP8.79□□□□□ -1
SMC4-215ENST00000484799 ATXN7O15265 892 aaPredicted RBP8.78□□□□□ -1
SMC4-215ENST00000484799 NOS2P35228 1153 aa8.78□□□□□ -1
SMC4-215ENST00000484799 FNBP4Q8N3X1 1017 aaPredicted RBP8.78□□□□□ -1
SMC4-215ENST00000484799 BEND7Q8N7W2 519 aaPredicted RBP8.78□□□□□ -1
SMC4-215ENST00000484799 L3MBTL2Q969R5 705 aa8.78□□□□□ -1
SMC4-215ENST00000484799 ABHD17AQ96GS6 310 aa8.78□□□□□ -1
SMC4-215ENST00000484799 ZNF594Q96JF6 807 aaPredicted RBP8.78□□□□□ -1
SMC4-215ENST00000484799 OXCT2Q9BYC2 517 aaPredicted RBP8.78□□□□□ -1
SMC4-215ENST00000484799 ZDHHC3Q9NYG2 299 aa8.78□□□□□ -1
SMC4-215ENST00000484799 SERTM1A2A2V5 107 aa8.77□□□□□ -1.01
SMC4-215ENST00000484799 KHNYNO15037 678 aaKnown RBP8.77□□□□□ -1.01
SMC4-215ENST00000484799 FGFR3P22607 806 aa8.77□□□□□ -1.01
SMC4-215ENST00000484799 SLC9A9Q8IVB4 645 aa8.77□□□□□ -1.01
SMC4-215ENST00000484799 TMEM151AQ8N4L1 468 aa8.77□□□□□ -1.01
SMC4-215ENST00000484799 PHF20L1A8MW92 1017 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 ZBTB7BO15156 539 aaPredicted RBP8.76□□□□□ -1.01
SMC4-215ENST00000484799 ARHGEF15O94989 841 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 AMPD1P23109 780 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 KCNMA1Q12791 1236 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 TBCELQ5QJ74 424 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 ACDQ96AP0 544 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 KLRG1Q96E93 195 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 UCN2Q96RP3 112 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 HINFPQ9BQA5 517 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 VRTNQ9H8Y1 702 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 RRAGCQ9HB90 399 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 GDF2Q9UK05 429 aaPredicted RBP8.76□□□□□ -1.01
SMC4-215ENST00000484799 ZNF777Q9ULD5 760 aaPredicted RBP8.76□□□□□ -1.01
SMC4-215ENST00000484799 PRR12Q9ULL5 1215 aa8.76□□□□□ -1.01
SMC4-215ENST00000484799 BNIP3LO60238 219 aa8.75□□□□□ -1.01
SMC4-215ENST00000484799 GDF11O95390 407 aa8.75□□□□□ -1.01
SMC4-215ENST00000484799 LMOD1P29536 600 aaPredicted RBP8.75□□□□□ -1.01
SMC4-215ENST00000484799 IRS1P35568 1242 aa8.75□□□□□ -1.01
SMC4-215ENST00000484799 CLDN10P78369 228 aa8.75□□□□□ -1.01
SMC4-215ENST00000484799 TEAD4Q15561 434 aa8.75□□□□□ -1.01
SMC4-215ENST00000484799 GALNT6Q8NCL4 622 aa8.75□□□□□ -1.01
SMC4-215ENST00000484799 IQSEC3Q9UPP2 1182 aaPredicted RBP8.75□□□□□ -1.01
SMC4-215ENST00000484799 SEC13P55735 322 aa8.74□□□□□ -1.01
SMC4-215ENST00000484799 GOLGA6L1Q8N7Z2 621 aa8.74□□□□□ -1.01
SMC4-215ENST00000484799 ZIC5Q96T25 663 aa8.74□□□□□ -1.01
SMC4-215ENST00000484799 PPP1R12CQ9BZL4 782 aa8.74□□□□□ -1.01
SMC4-215ENST00000484799 DNMT3AQ9Y6K1 912 aaPredicted RBP8.74□□□□□ -1.01
SMC4-215ENST00000484799 DCDC2BA2VCK2 349 aa8.73□□□□□ -1.01
SMC4-215ENST00000484799 SFI1A8K8P3 1242 aa8.73□□□□□ -1.01
SMC4-215ENST00000484799 PPP1R12BO60237 982 aaPredicted RBP8.73□□□□□ -1.01
SMC4-215ENST00000484799 PSMA6P60900 246 aaKnown RBP8.73□□□□□ -1.01
SMC4-215ENST00000484799 CTBSQ01459 385 aa8.73□□□□□ -1.01
SMC4-215ENST00000484799 RASSF7Q02833 373 aa8.73□□□□□ -1.01
SMC4-215ENST00000484799 KANK3Q6NY19 840 aa8.73□□□□□ -1.01
SMC4-215ENST00000484799 RHPN1Q8TCX5 695 aa8.73□□□□□ -1.01
SMC4-215ENST00000484799 CHMP7Q8WUX9 453 aaPredicted RBP8.73□□□□□ -1.01
SMC4-215ENST00000484799 LRRC4BQ9NT99 713 aa8.73□□□□□ -1.01
SMC4-215ENST00000484799 ANKIB1Q9P2G1 1089 aa8.73□□□□□ -1.01
SMC4-215ENST00000484799 HCN4Q9Y3Q4 1203 aa8.73□□□□□ -1.01
SMC4-215ENST00000484799 MAFBQ9Y5Q3 323 aaPredicted RBP8.73□□□□□ -1.01
SMC4-215ENST00000484799 M0R2N6 131 aa8.72□□□□□ -1.01
SMC4-215ENST00000484799 OIP5O43482 229 aa8.72□□□□□ -1.01
SMC4-215ENST00000484799 ATP4AP20648 1035 aa8.72□□□□□ -1.01
SMC4-215ENST00000484799 LRRC69Q6ZNQ3 347 aa8.72□□□□□ -1.01
SMC4-215ENST00000484799 EDARADDQ8WWZ3 215 aa8.72□□□□□ -1.01
SMC4-215ENST00000484799 KIAA1024Q9UPX6 916 aa8.72□□□□□ -1.01
SMC4-215ENST00000484799 USP3Q9Y6I4 520 aa8.72□□□□□ -1.01
SMC4-215ENST00000484799 THBS1P07996 1170 aa8.71□□□□□ -1.02
SMC4-215ENST00000484799 MAPTP10636 758 aaKnown RBP8.71□□□□□ -1.02
SMC4-215ENST00000484799 RFX1P22670 979 aa8.71□□□□□ -1.02
SMC4-215ENST00000484799 TXLNAP40222 546 aa8.71□□□□□ -1.02
SMC4-215ENST00000484799 SIX5Q8N196 739 aa8.71□□□□□ -1.02
SMC4-215ENST00000484799 TSEN2Q8NCE0 465 aaKnown RBP8.71□□□□□ -1.02
SMC4-215ENST00000484799 TSPAN10Q9H1Z9 355 aaPredicted RBP8.71□□□□□ -1.02
SMC4-215ENST00000484799 FOXK2Q01167 660 aa8.7□□□□□ -1.02
SMC4-215ENST00000484799 MARK1Q9P0L2 795 aa8.7□□□□□ -1.02
SMC4-215ENST00000484799 PIK3R2O00459 728 aa8.69□□□□□ -1.02
SMC4-215ENST00000484799 CD33P20138 364 aa8.69□□□□□ -1.02
SMC4-215ENST00000484799 TNP2Q05952 138 aa8.69□□□□□ -1.02
SMC4-215ENST00000484799 NEUROD1Q13562 356 aa8.69□□□□□ -1.02
SMC4-215ENST00000484799 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
SMC4-215ENST00000484799 GAS2L2Q8NHY3 880 aa8.69□□□□□ -1.02
SMC4-215ENST00000484799 SCG3Q8WXD2 468 aaKnown RBP8.69□□□□□ -1.02
SMC4-215ENST00000484799 GGA1Q9UJY5 639 aa8.69□□□□□ -1.02
SMC4-215ENST00000484799 GPC6Q9Y625 555 aaPredicted RBP8.69□□□□□ -1.02
SMC4-215ENST00000484799 CNTNAP5Q8WYK1 1306 aa8.69□□□□□ -1.02
SMC4-215ENST00000484799 ATAD2Q6PL18 1390 aa8.69□□□□□ -1.02
SMC4-215ENST00000484799 C1orf53Q5VUE5 145 aa8.68□□□□□ -1.02
SMC4-215ENST00000484799 ZDHHC1Q8WTX9 485 aa8.68□□□□□ -1.02
SMC4-215ENST00000484799 VTI1AQ96AJ9 217 aa8.68□□□□□ -1.02
SMC4-215ENST00000484799 NDFIP2Q9NV92 336 aa8.68□□□□□ -1.02
SMC4-215ENST00000484799 NEURL1BA8MQ27 555 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms