RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 PRIM1P49642 420 aaKnown RBP11.14□□□□□ -0.63
SND1-211ENST00000484767 ANKARQ7Z5J8 1434 aa11.14□□□□□ -0.63
SND1-211ENST00000484767 MED1Q15648 1581 aaPredicted RBP11.13□□□□□ -0.63
SND1-211ENST00000484767 TSPY26PQ9H489 355 aa11.13□□□□□ -0.63
SND1-211ENST00000484767 ESF1Q9H501 851 aaKnown RBP11.13□□□□□ -0.63
SND1-211ENST00000484767 TMEM63CQ9P1W3 806 aa11.13□□□□□ -0.63
SND1-211ENST00000484767 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
SND1-211ENST00000484767 FLIIQ13045 1269 aa11.12□□□□□ -0.63
SND1-211ENST00000484767 PKP1Q13835 747 aa11.12□□□□□ -0.63
SND1-211ENST00000484767 MTHFSDQ2M296 383 aaKnown RBP11.12□□□□□ -0.63
SND1-211ENST00000484767 KRT24Q2M2I5 525 aa11.12□□□□□ -0.63
SND1-211ENST00000484767 HSP90AB4PQ58FF6 505 aa11.12□□□□□ -0.63
SND1-211ENST00000484767 SSH3Q8TE77 659 aa11.12□□□□□ -0.63
SND1-211ENST00000484767 SLIT1O75093 1534 aa11.12□□□□□ -0.63
SND1-211ENST00000484767 NWD1Q149M9 1564 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 CEP170BQ9Y4F5 1589 aaPredicted RBP11.11□□□□□ -0.63
SND1-211ENST00000484767 DYNC1I1O14576 645 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 HOXB7P09629 217 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 HSPA4P34932 840 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 HSPA2P54652 639 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 HSP90AB2PQ58FF8 381 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 G2E3Q7L622 706 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 ATP6V1DQ9Y5K8 247 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 MAP3K5Q99683 1374 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 ARHGAP23Q9P227 1491 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 LMO7Q8WWI1 1683 aa11.11□□□□□ -0.63
SND1-211ENST00000484767 RGPD8O14715 1765 aaPredicted RBP11.11□□□□□ -0.63
SND1-211ENST00000484767 USP42Q9H9J4 1324 aaKnown RBP11.1□□□□□ -0.63
SND1-211ENST00000484767 PHRF1Q9P1Y6 1649 aaKnown RBP11.1□□□□□ -0.63
SND1-211ENST00000484767 GNAT3A8MTJ3 354 aa11.1□□□□□ -0.63
SND1-211ENST00000484767 SLC4A10Q6U841 1118 aa11.1□□□□□ -0.63
SND1-211ENST00000484767 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.1□□□□□ -0.63
SND1-211ENST00000484767 ADAMTSL3P82987 1691 aa11.1□□□□□ -0.63
SND1-211ENST00000484767 RAD50Q92878 1312 aa11.09□□□□□ -0.63
SND1-211ENST00000484767 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
SND1-211ENST00000484767 RPAP1Q9BWH6 1393 aaPredicted RBP11.09□□□□□ -0.63
SND1-211ENST00000484767 SYCE3A1L190 88 aa11.09□□□□□ -0.63
SND1-211ENST00000484767 UBTFL1P0CB47 393 aaPredicted RBP11.09□□□□□ -0.63
SND1-211ENST00000484767 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
SND1-211ENST00000484767 TAF7Q15545 349 aaPredicted RBP11.09□□□□□ -0.63
SND1-211ENST00000484767 SASS6Q6UVJ0 657 aa11.09□□□□□ -0.63
SND1-211ENST00000484767 ANO2Q9NQ90 1003 aa11.09□□□□□ -0.63
SND1-211ENST00000484767 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
SND1-211ENST00000484767 HDAC5Q9UQL6 1122 aa11.09□□□□□ -0.63
SND1-211ENST00000484767 EXOC6BQ9Y2D4 811 aa11.09□□□□□ -0.63
SND1-211ENST00000484767 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.09□□□□□ -0.63
SND1-211ENST00000484767 ADGRL3Q9HAR2 1447 aa11.09□□□□□ -0.63
SND1-211ENST00000484767 TTC41PQ6P2S7 1318 aa11.09□□□□□ -0.63
SND1-211ENST00000484767 TCHHQ07283 1943 aa11.08□□□□□ -0.64
SND1-211ENST00000484767 TRIM6-TRIM34B2RNG4 842 aa11.08□□□□□ -0.64
SND1-211ENST00000484767 F6X3S4 739 aa11.08□□□□□ -0.64
SND1-211ENST00000484767 APBB1O00213 710 aa11.08□□□□□ -0.64
SND1-211ENST00000484767 TPM3P06753 285 aa11.08□□□□□ -0.64
SND1-211ENST00000484767 CCDC183Q5T5S1 534 aa11.08□□□□□ -0.64
SND1-211ENST00000484767 CNTROBQ8N137 903 aa11.08□□□□□ -0.64
SND1-211ENST00000484767 KIF1BPQ96EK5 621 aa11.08□□□□□ -0.64
SND1-211ENST00000484767 LTN1O94822 1766 aa11.08□□□□□ -0.64
SND1-211ENST00000484767 SGSM2O43147 1006 aa11.07□□□□□ -0.64
SND1-211ENST00000484767 AMPHP49418 695 aa11.07□□□□□ -0.64
SND1-211ENST00000484767 KIAA2012Q0VF49 1180 aa11.07□□□□□ -0.64
SND1-211ENST00000484767 RUFY2Q8WXA3 655 aa11.07□□□□□ -0.64
SND1-211ENST00000484767 RILPL2Q969X0 211 aa11.07□□□□□ -0.64
SND1-211ENST00000484767 ZSCAN31Q96LW9 406 aaPredicted RBP11.07□□□□□ -0.64
SND1-211ENST00000484767 EYA1Q99502 592 aa11.07□□□□□ -0.64
SND1-211ENST00000484767 TM6SF1Q9BZW5 370 aa11.07□□□□□ -0.64
SND1-211ENST00000484767 TBX22Q9Y458 520 aa11.07□□□□□ -0.64
SND1-211ENST00000484767 OVOS2A0A0G2JMS6 1433 aa11.07□□□□□ -0.64
SND1-211ENST00000484767 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
SND1-211ENST00000484767 ZSCAN22P10073 491 aaPredicted RBP11.06□□□□□ -0.64
SND1-211ENST00000484767 UBE2HP62256 183 aa11.06□□□□□ -0.64
SND1-211ENST00000484767 KCNB2Q92953 911 aa11.06□□□□□ -0.64
SND1-211ENST00000484767 PRIMPOLQ96LW4 560 aa11.06□□□□□ -0.64
SND1-211ENST00000484767 TTC14Q96N46 770 aa11.06□□□□□ -0.64
SND1-211ENST00000484767 USP44Q9H0E7 712 aa11.06□□□□□ -0.64
SND1-211ENST00000484767 PALD1Q9ULE6 856 aa11.06□□□□□ -0.64
SND1-211ENST00000484767 R3HCC1Q9Y3T6 440 aaKnown RBP11.06□□□□□ -0.64
SND1-211ENST00000484767 LRRFIP2Q9Y608 721 aaKnown RBP11.06□□□□□ -0.64
SND1-211ENST00000484767 HMGN5P82970 282 aaKnown RBP11.05□□□□□ -0.64
SND1-211ENST00000484767 MTX1Q13505 466 aa11.05□□□□□ -0.64
SND1-211ENST00000484767 PI4K2BQ8TCG2 481 aa11.05□□□□□ -0.64
SND1-211ENST00000484767 RHPN1Q8TCX5 695 aa11.05□□□□□ -0.64
SND1-211ENST00000484767 SH2B1Q9NRF2 756 aaPredicted RBP11.05□□□□□ -0.64
SND1-211ENST00000484767 LIMCH1Q9UPQ0 1083 aa11.05□□□□□ -0.64
SND1-211ENST00000484767 CEMIPQ8WUJ3 1361 aa11.04□□□□□ -0.64
SND1-211ENST00000484767 NCAPD2Q15021 1401 aa11.04□□□□□ -0.64
SND1-211ENST00000484767 FOXO3O43524 673 aa11.04□□□□□ -0.64
SND1-211ENST00000484767 PTMAP06454 111 aaKnown RBP11.04□□□□□ -0.64
SND1-211ENST00000484767 USP48Q86UV5 1035 aa11.04□□□□□ -0.64
SND1-211ENST00000484767 LSG1Q9H089 658 aaKnown RBP11.04□□□□□ -0.64
SND1-211ENST00000484767 NSFL1CQ9UNZ2 370 aaKnown RBP11.04□□□□□ -0.64
SND1-211ENST00000484767 SNX14Q9Y5W7 946 aa11.04□□□□□ -0.64
SND1-211ENST00000484767 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
SND1-211ENST00000484767 CCDC171Q6TFL3 1326 aa11.04□□□□□ -0.64
SND1-211ENST00000484767 UQCRHLA0A096LP55 91 aa11.03□□□□□ -0.64
SND1-211ENST00000484767 HIP1O00291 1037 aa11.03□□□□□ -0.64
SND1-211ENST00000484767 STX6O43752 255 aa11.03□□□□□ -0.64
SND1-211ENST00000484767 GLRX3O76003 335 aaKnown RBP11.03□□□□□ -0.64
SND1-211ENST00000484767 UQCRHP07919 91 aa11.03□□□□□ -0.64
SND1-211ENST00000484767 HOXC9P31274 260 aa11.03□□□□□ -0.64
SND1-211ENST00000484767 VPS53Q5VIR6 699 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms