RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 CRKLP46109 303 aaKnown RBP23.67■■□□□ 1.38
RNF38-207ENST00000484621 MCM10Q7L590 875 aa23.67■■□□□ 1.38
RNF38-207ENST00000484621 PLEKHF1Q96S99 279 aa23.67■■□□□ 1.38
RNF38-207ENST00000484621 CAPN15O75808 1086 aa23.66■■□□□ 1.38
RNF38-207ENST00000484621 TRAPPC3LQ5T215 181 aa23.66■■□□□ 1.38
RNF38-207ENST00000484621 DNAJC10Q8IXB1 793 aa23.66■■□□□ 1.38
RNF38-207ENST00000484621 HTATSF1O43719 755 aaKnown RBP23.65■■□□□ 1.38
RNF38-207ENST00000484621 RPS6KA4O75676 772 aa23.65■■□□□ 1.38
RNF38-207ENST00000484621 DCTN1Q14203 1278 aa23.65■■□□□ 1.38
RNF38-207ENST00000484621 BTBD11A6QL63 1104 aa23.64■■□□□ 1.37
RNF38-207ENST00000484621 TOMM70O94826 608 aa23.64■■□□□ 1.37
RNF38-207ENST00000484621 ZNF790Q6PG37 636 aa23.64■■□□□ 1.37
RNF38-207ENST00000484621 ADRA2BP18089 450 aa23.63■■□□□ 1.37
RNF38-207ENST00000484621 BRCA1P38398 1863 aaKnown RBP23.63■■□□□ 1.37
RNF38-207ENST00000484621 WDR43Q15061 677 aaKnown RBP eCLIP23.63■■□□□ 1.37
RNF38-207ENST00000484621 NFE2L2Q16236 605 aa23.63■■□□□ 1.37
RNF38-207ENST00000484621 VSIG10Q8N0Z9 540 aa23.63■■□□□ 1.37
RNF38-207ENST00000484621 A0A0G2JLW4 131 aa23.62■■□□□ 1.37
RNF38-207ENST00000484621 MMP10P09238 476 aa23.62■■□□□ 1.37
RNF38-207ENST00000484621 C4AP0C0L4 1744 aa23.62■■□□□ 1.37
RNF38-207ENST00000484621 RFC4P35249 363 aa23.61■■□□□ 1.37
RNF38-207ENST00000484621 ARHGEF1Q92888 912 aaKnown RBP23.61■■□□□ 1.37
RNF38-207ENST00000484621 ZNF496Q96IT1 587 aaPredicted RBP23.61■■□□□ 1.37
RNF38-207ENST00000484621 CCDC87Q9NVE4 849 aa23.61■■□□□ 1.37
RNF38-207ENST00000484621 BCS1LQ9Y276 419 aa23.61■■□□□ 1.37
RNF38-207ENST00000484621 C10orf71Q711Q0 1435 aa23.6■■□□□ 1.37
RNF38-207ENST00000484621 CYP19A1P11511 503 aaPredicted RBP23.6■■□□□ 1.37
RNF38-207ENST00000484621 INTS5Q6P9B9 1019 aaKnown RBP23.6■■□□□ 1.37
RNF38-207ENST00000484621 FMNL2Q96PY5 1086 aa23.6■■□□□ 1.37
RNF38-207ENST00000484621 HEG1Q9ULI3 1381 aa23.59■■□□□ 1.37
RNF38-207ENST00000484621 KCNQ3O43525 872 aa23.58■■□□□ 1.37
RNF38-207ENST00000484621 STARD3NLO95772 234 aa23.57■■□□□ 1.36
RNF38-207ENST00000484621 ARHGAP27Q6ZUM4 889 aa23.57■■□□□ 1.36
RNF38-207ENST00000484621 CCDC146Q8IYE0 955 aa23.57■■□□□ 1.36
RNF38-207ENST00000484621 KLRG1Q96E93 195 aa23.57■■□□□ 1.36
RNF38-207ENST00000484621 DPEP1P16444 411 aa23.56■■□□□ 1.36
RNF38-207ENST00000484621 TAF7Q15545 349 aaPredicted RBP23.56■■□□□ 1.36
RNF38-207ENST00000484621 TEX13AQ9BXU3 409 aaPredicted RBP23.56■■□□□ 1.36
RNF38-207ENST00000484621 ZBTB1Q9Y2K1 713 aa23.55■■□□□ 1.36
RNF38-207ENST00000484621 CANXP27824 592 aaKnown RBP23.54■■□□□ 1.36
RNF38-207ENST00000484621 RIPK4P57078 832 aa23.54■■□□□ 1.36
RNF38-207ENST00000484621 NLGN1Q8N2Q7 840 aa23.54■■□□□ 1.36
RNF38-207ENST00000484621 JMYQ8N9B5 988 aa23.54■■□□□ 1.36
RNF38-207ENST00000484621 ADAMTS8Q9UP79 889 aa23.54■■□□□ 1.36
RNF38-207ENST00000484621 SOS1Q07889 1333 aaPredicted RBP23.54■■□□□ 1.36
RNF38-207ENST00000484621 GYS1P13807 737 aa23.53■■□□□ 1.36
RNF38-207ENST00000484621 THUMPD2Q9BTF0 503 aaKnown RBP23.53■■□□□ 1.36
RNF38-207ENST00000484621 SRP68Q9UHB9 627 aaKnown RBP23.53■■□□□ 1.36
RNF38-207ENST00000484621 ARFGEF1Q9Y6D6 1849 aa23.52■■□□□ 1.36
RNF38-207ENST00000484621 TMPOP42166 694 aaKnown RBP23.52■■□□□ 1.36
RNF38-207ENST00000484621 C9orf131Q5VYM1 1079 aa23.52■■□□□ 1.36
RNF38-207ENST00000484621 RBM46Q8TBY0 533 aaKnown RBP23.52■■□□□ 1.36
RNF38-207ENST00000484621 RUNDC1Q96C34 613 aa23.52■■□□□ 1.36
RNF38-207ENST00000484621 MIS18AQ9NYP9 233 aa23.52■■□□□ 1.36
RNF38-207ENST00000484621 COL15A1P39059 1388 aa23.52■■□□□ 1.36
RNF38-207ENST00000484621 ANP32CO43423 234 aa23.51■■□□□ 1.35
RNF38-207ENST00000484621 ZPR1O75312 459 aa23.51■■□□□ 1.35
RNF38-207ENST00000484621 KCNA3P22001 575 aa23.51■■□□□ 1.35
RNF38-207ENST00000484621 LMOD3Q0VAK6 560 aa23.51■■□□□ 1.35
RNF38-207ENST00000484621 PNISRQ8TF01 805 aaKnown RBP23.51■■□□□ 1.35
RNF38-207ENST00000484621 USP42Q9H9J4 1324 aaKnown RBP23.51■■□□□ 1.35
RNF38-207ENST00000484621 KDM3BQ7LBC6 1761 aa23.5■■□□□ 1.35
RNF38-207ENST00000484621 NEUROD2Q15784 382 aa23.5■■□□□ 1.35
RNF38-207ENST00000484621 RRP7AQ9Y3A4 280 aaKnown RBP23.5■■□□□ 1.35
RNF38-207ENST00000484621 SNRPA1P09661 255 aaKnown RBP23.49■■□□□ 1.35
RNF38-207ENST00000484621 TGFB2P61812 414 aa23.49■■□□□ 1.35
RNF38-207ENST00000484621 ZNF330Q9Y3S2 320 aaPredicted RBP23.49■■□□□ 1.35
RNF38-207ENST00000484621 A1BGP04217 495 aa23.48■■□□□ 1.35
RNF38-207ENST00000484621 TNS4Q8IZW8 715 aa23.48■■□□□ 1.35
RNF38-207ENST00000484621 FKBP8Q14318 412 aa23.47■■□□□ 1.35
RNF38-207ENST00000484621 NPM2Q86SE8 214 aaKnown RBP23.47■■□□□ 1.35
RNF38-207ENST00000484621 USP16Q9Y5T5 823 aa23.47■■□□□ 1.35
RNF38-207ENST00000484621 PARP3Q9Y6F1 533 aa23.47■■□□□ 1.35
RNF38-207ENST00000484621 PRAMEF22A3QJZ6 481 aa23.46■■□□□ 1.35
RNF38-207ENST00000484621 USPL1Q5W0Q7 1092 aa23.46■■□□□ 1.35
RNF38-207ENST00000484621 NARFQ9UHQ1 456 aa23.46■■□□□ 1.35
RNF38-207ENST00000484621 A0A087WZG4 1122 aa23.45■■□□□ 1.34
RNF38-207ENST00000484621 EIF5P55010 431 aaKnown RBP23.45■■□□□ 1.34
RNF38-207ENST00000484621 RRAGCQ9HB90 399 aa23.45■■□□□ 1.34
RNF38-207ENST00000484621 SBF1O95248 1867 aa23.45■■□□□ 1.34
RNF38-207ENST00000484621 CCDC184Q52MB2 194 aa23.44■■□□□ 1.34
RNF38-207ENST00000484621 LAMB4A4D0S4 1761 aa23.44■■□□□ 1.34
RNF38-207ENST00000484621 TNRC6CQ9HCJ0 1690 aaKnown RBP23.44■■□□□ 1.34
RNF38-207ENST00000484621 IL6STP40189 918 aaPredicted RBP23.43■■□□□ 1.34
RNF38-207ENST00000484621 PRELPP51888 382 aa23.43■■□□□ 1.34
RNF38-207ENST00000484621 TSPYL4Q9UJ04 414 aa23.43■■□□□ 1.34
RNF38-207ENST00000484621 RNF181Q9P0P0 153 aa23.42■■□□□ 1.34
RNF38-207ENST00000484621 PIP4K2AP48426 406 aaPredicted RBP23.41■■□□□ 1.34
RNF38-207ENST00000484621 EIF4A1P60842 406 aaKnown RBP23.41■■□□□ 1.34
RNF38-207ENST00000484621 FSTL1Q12841 308 aa23.41■■□□□ 1.34
RNF38-207ENST00000484621 C16orf71Q8IYS4 520 aaPredicted RBP23.41■■□□□ 1.34
RNF38-207ENST00000484621 DDR1Q08345 913 aa23.4■■□□□ 1.34
RNF38-207ENST00000484621 MRS2Q9HD23 443 aa23.4■■□□□ 1.34
RNF38-207ENST00000484621 TBC1D2BQ9UPU7 963 aa23.4■■□□□ 1.34
RNF38-207ENST00000484621 PCNTO95613 3336 aa23.39■■□□□ 1.34
RNF38-207ENST00000484621 APAF1O14727 1248 aa23.39■■□□□ 1.33
RNF38-207ENST00000484621 CHRNA5P30532 468 aa23.39■■□□□ 1.33
RNF38-207ENST00000484621 TRIM35Q9UPQ4 493 aa23.39■■□□□ 1.33
RNF38-207ENST00000484621 SCN7AQ01118 1682 aa23.38■■□□□ 1.33
RNF38-207ENST00000484621 TM4SF1P30408 202 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms