RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 INTS5Q6P9B9 1019 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP2-217ENST00000484546 TRAPPC3LQ5T215 181 aa15.35■□□□□ 0.05
CDK5RAP2-217ENST00000484546 DIEXFQ68CQ4 756 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP2-217ENST00000484546 NPM2Q86SE8 214 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP2-217ENST00000484546 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
CDK5RAP2-217ENST00000484546 CCDC87Q9NVE4 849 aa15.35■□□□□ 0.05
CDK5RAP2-217ENST00000484546 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
CDK5RAP2-217ENST00000484546 CALD1Q05682 793 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP2-217ENST00000484546 ARHGEF1Q92888 912 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP2-217ENST00000484546 FHDC1Q9C0D6 1143 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP2-217ENST00000484546 MIS18AQ9NYP9 233 aa15.34■□□□□ 0.05
CDK5RAP2-217ENST00000484546 TSPYL4Q9UJ04 414 aa15.34■□□□□ 0.05
CDK5RAP2-217ENST00000484546 ZBTB1Q9Y2K1 713 aa15.34■□□□□ 0.05
CDK5RAP2-217ENST00000484546 LAS1LQ9Y4W2 734 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP2-217ENST00000484546 SOS1Q07889 1333 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP2-217ENST00000484546 RFC4P35249 363 aa15.33■□□□□ 0.04
CDK5RAP2-217ENST00000484546 SNRPA1P09661 255 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP2-217ENST00000484546 ZNF330Q9Y3S2 320 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP2-217ENST00000484546 COL15A1P39059 1388 aa15.32■□□□□ 0.04
CDK5RAP2-217ENST00000484546 CANXP27824 592 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP2-217ENST00000484546 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
CDK5RAP2-217ENST00000484546 USP42Q9H9J4 1324 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP2-217ENST00000484546 PRAMEF22A3QJZ6 481 aa15.3■□□□□ 0.04
CDK5RAP2-217ENST00000484546 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
CDK5RAP2-217ENST00000484546 SYT17Q9BSW7 474 aa15.3■□□□□ 0.04
CDK5RAP2-217ENST00000484546 BABAM1Q9NWV8 329 aa15.3■□□□□ 0.04
CDK5RAP2-217ENST00000484546 SRP68Q9UHB9 627 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP2-217ENST00000484546 TRIM35Q9UPQ4 493 aa15.3■□□□□ 0.04
CDK5RAP2-217ENST00000484546 ZPR1O75312 459 aa15.29■□□□□ 0.04
CDK5RAP2-217ENST00000484546 GYS1P13807 737 aa15.29■□□□□ 0.04
CDK5RAP2-217ENST00000484546 KLHL34Q8N239 644 aa15.29■□□□□ 0.04
CDK5RAP2-217ENST00000484546 CCER2I3L3R5 266 aa15.28■□□□□ 0.04
CDK5RAP2-217ENST00000484546 A0A087WZG4 1122 aa15.27■□□□□ 0.04
CDK5RAP2-217ENST00000484546 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.04
CDK5RAP2-217ENST00000484546 A1BGP04217 495 aa15.27■□□□□ 0.04
CDK5RAP2-217ENST00000484546 MMP10P09238 476 aa15.27■□□□□ 0.04
CDK5RAP2-217ENST00000484546 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP2-217ENST00000484546 EIF4A1P60842 406 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP2-217ENST00000484546 NLGN1Q8N2Q7 840 aa15.27■□□□□ 0.04
CDK5RAP2-217ENST00000484546 SALL2Q9Y467 1007 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP2-217ENST00000484546 USP16Q9Y5T5 823 aa15.27■□□□□ 0.04
CDK5RAP2-217ENST00000484546 BCORQ6W2J9 1755 aa15.26■□□□□ 0.03
CDK5RAP2-217ENST00000484546 GNAI1P63096 354 aa15.26■□□□□ 0.03
CDK5RAP2-217ENST00000484546 FKBP8Q14318 412 aa15.26■□□□□ 0.03
CDK5RAP2-217ENST00000484546 USPL1Q5W0Q7 1092 aa15.26■□□□□ 0.03
CDK5RAP2-217ENST00000484546 KIF13BQ9NQT8 1826 aa15.25■□□□□ 0.03
CDK5RAP2-217ENST00000484546 IL6STP40189 918 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP2-217ENST00000484546 NLGN2Q8NFZ4 835 aa15.25■□□□□ 0.03
CDK5RAP2-217ENST00000484546 CFAP44Q96MT7 982 aa15.25■□□□□ 0.03
CDK5RAP2-217ENST00000484546 IFT57Q9NWB7 429 aa15.25■□□□□ 0.03
CDK5RAP2-217ENST00000484546 NARFQ9UHQ1 456 aa15.25■□□□□ 0.03
CDK5RAP2-217ENST00000484546 C10orf71Q711Q0 1435 aa15.25■□□□□ 0.03
CDK5RAP2-217ENST00000484546 CHL1O00533 1208 aa15.24■□□□□ 0.03
CDK5RAP2-217ENST00000484546 GIGYF1O75420 1035 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP2-217ENST00000484546 PIP4K2AP48426 406 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP2-217ENST00000484546 CCDC27Q2M243 656 aa15.24■□□□□ 0.03
CDK5RAP2-217ENST00000484546 CD2APQ9Y5K6 639 aa15.24■□□□□ 0.03
CDK5RAP2-217ENST00000484546 KIAA1551Q9HCM1 1747 aa15.23■□□□□ 0.03
CDK5RAP2-217ENST00000484546 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
CDK5RAP2-217ENST00000484546 EIF2S2P20042 333 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP2-217ENST00000484546 DDR1Q08345 913 aa15.23■□□□□ 0.03
CDK5RAP2-217ENST00000484546 BCL2L12Q9HB09 334 aa15.23■□□□□ 0.03
CDK5RAP2-217ENST00000484546 NBPF26B4DH59 902 aa15.22■□□□□ 0.03
CDK5RAP2-217ENST00000484546 NBPF10Q6P3W6 841 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP2-217ENST00000484546 WWC1Q8IX03 1113 aa15.22■□□□□ 0.03
CDK5RAP2-217ENST00000484546 NGEFQ8N5V2 710 aa15.22■□□□□ 0.03
CDK5RAP2-217ENST00000484546 NBPF15Q8N660 670 aa15.22■□□□□ 0.03
CDK5RAP2-217ENST00000484546 PARP3Q9Y6F1 533 aa15.22■□□□□ 0.03
CDK5RAP2-217ENST00000484546 NRXN2Q9P2S2 1712 aa15.21■□□□□ 0.03
CDK5RAP2-217ENST00000484546 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP2-217ENST00000484546 DZIP3Q86Y13 1208 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP2-217ENST00000484546 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
CDK5RAP2-217ENST00000484546 AFDNP55196 1824 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP2-217ENST00000484546 POLRMTO00411 1230 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP2-217ENST00000484546 CAMTA2O94983 1202 aa15.2■□□□□ 0.02
CDK5RAP2-217ENST00000484546 MYL6BP14649 208 aa15.2■□□□□ 0.02
CDK5RAP2-217ENST00000484546 TM4SF1P30408 202 aa15.2■□□□□ 0.02
CDK5RAP2-217ENST00000484546 NFIXQ14938 502 aa15.2■□□□□ 0.02
CDK5RAP2-217ENST00000484546 MIER1Q8N108 512 aa15.2■□□□□ 0.02
CDK5RAP2-217ENST00000484546 TBC1D2BQ9UPU7 963 aa15.2■□□□□ 0.02
CDK5RAP2-217ENST00000484546 ZNF652Q9Y2D9 606 aa15.2■□□□□ 0.02
CDK5RAP2-217ENST00000484546 PXDNLA1KZ92 1463 aa15.2■□□□□ 0.02
CDK5RAP2-217ENST00000484546 ERBB4Q15303 1308 aa15.19■□□□□ 0.02
CDK5RAP2-217ENST00000484546 KIF6Q6ZMV9 814 aa15.19■□□□□ 0.02
CDK5RAP2-217ENST00000484546 NECTIN2Q92692 538 aa15.19■□□□□ 0.02
CDK5RAP2-217ENST00000484546 IL16Q14005 1332 aa15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 NPHP1O15259 732 aa15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 HOXB7P09629 217 aa15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 ZNF853P0CG23 659 aa15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 KRT24Q2M2I5 525 aa15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 HDGFL1Q5TGJ6 251 aa15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 BICDL1Q6ZP65 573 aa15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 WDR63Q8IWG1 891 aa15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 PIAS4Q8N2W9 510 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 CHMP4AQ9BY43 222 aa15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 N4BP2Q86UW6 1770 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP2-217ENST00000484546 DUSP27Q5VZP5 1158 aa15.17■□□□□ 0.02
CDK5RAP2-217ENST00000484546 TBC1D9BQ66K14 1250 aa15.16■□□□□ 0.02
CDK5RAP2-217ENST00000484546 TSR2Q969E8 191 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP2-217ENST00000484546 CARMIL3Q8ND23 1372 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms