RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 KCNF1Q9H3M0 494 aa23.77■■□□□ 1.4
RPUSD3-216ENST00000484134 A2ML1A8K2U0 1454 aa23.77■■□□□ 1.4
RPUSD3-216ENST00000484134 FIBPO43427 364 aa23.76■■□□□ 1.39
RPUSD3-216ENST00000484134 AK2P54819 239 aa23.76■■□□□ 1.39
RPUSD3-216ENST00000484134 NECTIN2Q92692 538 aa23.76■■□□□ 1.39
RPUSD3-216ENST00000484134 LETM1O95202 739 aaPredicted RBP23.76■■□□□ 1.39
RPUSD3-216ENST00000484134 DMTNQ08495 405 aa23.76■■□□□ 1.39
RPUSD3-216ENST00000484134 ATP2B3Q16720 1220 aa23.76■■□□□ 1.39
RPUSD3-216ENST00000484134 KIF3AQ9Y496 699 aa23.76■■□□□ 1.39
RPUSD3-216ENST00000484134 PLCB2Q00722 1185 aa23.75■■□□□ 1.39
RPUSD3-216ENST00000484134 PYCARDQ9ULZ3 195 aa23.75■■□□□ 1.39
RPUSD3-216ENST00000484134 MAP3K19Q56UN5 1328 aa23.75■■□□□ 1.39
RPUSD3-216ENST00000484134 AKAP12Q02952 1782 aa23.75■■□□□ 1.39
RPUSD3-216ENST00000484134 CBX1P83916 185 aa23.75■■□□□ 1.39
RPUSD3-216ENST00000484134 BCL2L12Q9HB09 334 aa23.75■■□□□ 1.39
RPUSD3-216ENST00000484134 PEAK1Q9H792 1746 aa23.74■■□□□ 1.39
RPUSD3-216ENST00000484134 F13A1P00488 732 aa23.74■■□□□ 1.39
RPUSD3-216ENST00000484134 KIAA1524Q8TCG1 905 aa23.74■■□□□ 1.39
RPUSD3-216ENST00000484134 RAD50Q92878 1312 aa23.74■■□□□ 1.39
RPUSD3-216ENST00000484134 CPA1P15085 419 aa23.74■■□□□ 1.39
RPUSD3-216ENST00000484134 SOX12O15370 315 aa23.73■■□□□ 1.39
RPUSD3-216ENST00000484134 SGSM2O43147 1006 aa23.73■■□□□ 1.39
RPUSD3-216ENST00000484134 LARGE1O95461 756 aa23.73■■□□□ 1.39
RPUSD3-216ENST00000484134 STK31Q9BXU1 1019 aa23.73■■□□□ 1.39
RPUSD3-216ENST00000484134 USP44Q9H0E7 712 aa23.73■■□□□ 1.39
RPUSD3-216ENST00000484134 TTC21BQ7Z4L5 1316 aa23.73■■□□□ 1.39
RPUSD3-216ENST00000484134 EPB41L2O43491 1005 aaKnown RBP23.73■■□□□ 1.39
RPUSD3-216ENST00000484134 PPP4R3BQ5MIZ7 849 aa23.73■■□□□ 1.39
RPUSD3-216ENST00000484134 LSG1Q9H089 658 aaKnown RBP23.73■■□□□ 1.39
RPUSD3-216ENST00000484134 RGPD1P0DJD0 1748 aa23.73■■□□□ 1.39
RPUSD3-216ENST00000484134 AOX1Q06278 1338 aa23.72■■□□□ 1.39
RPUSD3-216ENST00000484134 PI4K2BQ8TCG2 481 aa23.72■■□□□ 1.39
RPUSD3-216ENST00000484134 RTF1Q92541 710 aaKnown RBP23.72■■□□□ 1.39
RPUSD3-216ENST00000484134 LIMCH1Q9UPQ0 1083 aa23.72■■□□□ 1.39
RPUSD3-216ENST00000484134 RIMS1Q86UR5 1692 aaKnown RBP23.72■■□□□ 1.39
RPUSD3-216ENST00000484134 UTP14CQ5TAP6 766 aaKnown RBP23.71■■□□□ 1.39
RPUSD3-216ENST00000484134 ARHGEF10O15013 1369 aa23.71■■□□□ 1.39
RPUSD3-216ENST00000484134 DNM1Q05193 864 aaKnown RBP23.71■■□□□ 1.39
RPUSD3-216ENST00000484134 XRN1Q8IZH2 1706 aaKnown RBP23.7■■□□□ 1.38
RPUSD3-216ENST00000484134 SMC3Q9UQE7 1217 aa23.7■■□□□ 1.38
RPUSD3-216ENST00000484134 ITSN1Q15811 1721 aa23.7■■□□□ 1.38
RPUSD3-216ENST00000484134 SPC24Q8NBT2 197 aa23.7■■□□□ 1.38
RPUSD3-216ENST00000484134 SOS1Q07889 1333 aaPredicted RBP23.7■■□□□ 1.38
RPUSD3-216ENST00000484134 NRXN3Q9Y4C0 1643 aa23.69■■□□□ 1.38
RPUSD3-216ENST00000484134 OVOS2A0A0J9YW53 1432 aa23.69■■□□□ 1.38
RPUSD3-216ENST00000484134 OVOS2Q6IE36 1432 aa23.69■■□□□ 1.38
RPUSD3-216ENST00000484134 RIOK3O14730 519 aaKnown RBP23.69■■□□□ 1.38
RPUSD3-216ENST00000484134 SSH3Q8TE77 659 aa23.69■■□□□ 1.38
RPUSD3-216ENST00000484134 SPG7Q9UQ90 795 aa23.68■■□□□ 1.38
RPUSD3-216ENST00000484134 MTMR6Q9Y217 621 aa23.68■■□□□ 1.38
RPUSD3-216ENST00000484134 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.68■■□□□ 1.38
RPUSD3-216ENST00000484134 CCDC30Q5VVM6 783 aa23.67■■□□□ 1.38
RPUSD3-216ENST00000484134 HYPKQ9NX55 129 aa23.67■■□□□ 1.38
RPUSD3-216ENST00000484134 SURF6O75683 361 aaKnown RBP23.66■■□□□ 1.38
RPUSD3-216ENST00000484134 GJB2P29033 226 aa23.66■■□□□ 1.38
RPUSD3-216ENST00000484134 PPP1R42Q7Z4L9 355 aa23.66■■□□□ 1.38
RPUSD3-216ENST00000484134 CCDC83Q8IWF9 413 aa23.66■■□□□ 1.38
RPUSD3-216ENST00000484134 ACEP12821 1306 aa23.66■■□□□ 1.38
RPUSD3-216ENST00000484134 NUTM2FA1L443 756 aa23.66■■□□□ 1.38
RPUSD3-216ENST00000484134 UBTFL1P0CB47 393 aaPredicted RBP23.66■■□□□ 1.38
RPUSD3-216ENST00000484134 CWC27Q6UX04 472 aaKnown RBP23.66■■□□□ 1.38
RPUSD3-216ENST00000484134 SPDYE4A6NLX3 237 aa23.65■■□□□ 1.38
RPUSD3-216ENST00000484134 CASTP20810 708 aaKnown RBP23.65■■□□□ 1.38
RPUSD3-216ENST00000484134 RHPN1Q8TCX5 695 aa23.65■■□□□ 1.38
RPUSD3-216ENST00000484134 ATP6V1DQ9Y5K8 247 aa23.65■■□□□ 1.38
RPUSD3-216ENST00000484134 ST3GAL1Q11201 340 aa23.64■■□□□ 1.37
RPUSD3-216ENST00000484134 ADCK5Q3MIX3 580 aa23.64■■□□□ 1.37
RPUSD3-216ENST00000484134 PDCL2Q8N4E4 241 aa23.64■■□□□ 1.37
RPUSD3-216ENST00000484134 ANKRD7Q92527 254 aa23.63■■□□□ 1.37
RPUSD3-216ENST00000484134 POLA2Q14181 598 aa23.62■■□□□ 1.37
RPUSD3-216ENST00000484134 FAM208AQ9UK61 1670 aaKnown RBP23.62■■□□□ 1.37
RPUSD3-216ENST00000484134 SPATA31D1Q6ZQQ2 1576 aa23.62■■□□□ 1.37
RPUSD3-216ENST00000484134 RAB11FIP3O75154 756 aa23.61■■□□□ 1.37
RPUSD3-216ENST00000484134 PTH1RQ03431 593 aa23.61■■□□□ 1.37
RPUSD3-216ENST00000484134 DIAPH3Q9NSV4 1193 aa23.61■■□□□ 1.37
RPUSD3-216ENST00000484134 CTIFO43310 598 aaKnown RBP23.61■■□□□ 1.37
RPUSD3-216ENST00000484134 PTGS1P23219 599 aa23.61■■□□□ 1.37
RPUSD3-216ENST00000484134 EYA1Q99502 592 aa23.61■■□□□ 1.37
RPUSD3-216ENST00000484134 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
RPUSD3-216ENST00000484134 PHAXQ9H814 394 aaKnown RBP23.6■■□□□ 1.37
RPUSD3-216ENST00000484134 USP31Q70CQ4 1352 aa23.6■■□□□ 1.37
RPUSD3-216ENST00000484134 U2AF2P26368 475 aaKnown RBP eCLIP23.6■■□□□ 1.37
RPUSD3-216ENST00000484134 CNTROBQ8N137 903 aa23.6■■□□□ 1.37
RPUSD3-216ENST00000484134 SIRT1Q96EB6 747 aa23.6■■□□□ 1.37
RPUSD3-216ENST00000484134 VPS37CA5D8V6 355 aaPredicted RBP23.59■■□□□ 1.37
RPUSD3-216ENST00000484134 CCDC192P0DO97 292 aa23.59■■□□□ 1.37
RPUSD3-216ENST00000484134 CHMP3Q9Y3E7 222 aa23.59■■□□□ 1.37
RPUSD3-216ENST00000484134 KDRP35968 1356 aa23.59■■□□□ 1.37
RPUSD3-216ENST00000484134 CEP170BQ9Y4F5 1589 aaPredicted RBP23.59■■□□□ 1.37
RPUSD3-216ENST00000484134 TPM3P06753 285 aa23.59■■□□□ 1.37
RPUSD3-216ENST00000484134 TTC6Q86TZ1 520 aa23.59■■□□□ 1.37
RPUSD3-216ENST00000484134 NECAB1Q8N987 351 aa23.59■■□□□ 1.37
RPUSD3-216ENST00000484134 JAKMIP1Q96N16 626 aaKnown RBP23.59■■□□□ 1.37
RPUSD3-216ENST00000484134 PDRG1Q9NUG6 133 aa23.59■■□□□ 1.37
RPUSD3-216ENST00000484134 KLHL34Q8N239 644 aa23.58■■□□□ 1.37
RPUSD3-216ENST00000484134 GTPBP4Q9BZE4 634 aaKnown RBP23.58■■□□□ 1.37
RPUSD3-216ENST00000484134 TECPR2O15040 1411 aa23.58■■□□□ 1.37
RPUSD3-216ENST00000484134 SRGAP3O43295 1099 aa23.58■■□□□ 1.37
RPUSD3-216ENST00000484134 LIG1P18858 919 aa23.58■■□□□ 1.37
RPUSD3-216ENST00000484134 CAMK4Q16566 473 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms