RNA–Protein interactions for RNA: ENST00000484086.6

RFC5-206, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-206ENST00000484086 FHDC1Q9C0D6 1143 aaPredicted RBP17.43■□□□□ 0.38
RFC5-206ENST00000484086 SLC27A3Q5K4L6 730 aa17.41■□□□□ 0.38
RFC5-206ENST00000484086 SYTL4Q96C24 671 aaPredicted RBP17.41■□□□□ 0.38
RFC5-206ENST00000484086 UBR3Q6ZT12 1888 aa17.41■□□□□ 0.38
RFC5-206ENST00000484086 RNF123Q5XPI4 1314 aa17.41■□□□□ 0.38
RFC5-206ENST00000484086 ELL2O00472 640 aaPredicted RBP17.4■□□□□ 0.38
RFC5-206ENST00000484086 ALDH1L2Q3SY69 923 aa17.4■□□□□ 0.38
RFC5-206ENST00000484086 AMIGO3Q86WK7 504 aa17.4■□□□□ 0.38
RFC5-206ENST00000484086 ZNF496Q96IT1 587 aaPredicted RBP17.4■□□□□ 0.38
RFC5-206ENST00000484086 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
RFC5-206ENST00000484086 SYT17Q9BSW7 474 aa17.4■□□□□ 0.38
RFC5-206ENST00000484086 C4BP0C0L5 1744 aa17.4■□□□□ 0.38
RFC5-206ENST00000484086 KCPQ6ZWJ8 1503 aa17.4■□□□□ 0.38
RFC5-206ENST00000484086 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.37
RFC5-206ENST00000484086 SSH1Q8WYL5 1049 aa17.39■□□□□ 0.37
RFC5-206ENST00000484086 CHMP4AQ9BY43 222 aa17.39■□□□□ 0.37
RFC5-206ENST00000484086 ATG3Q9NT62 314 aa17.39■□□□□ 0.37
RFC5-206ENST00000484086 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
RFC5-206ENST00000484086 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
RFC5-206ENST00000484086 ASAP1Q9ULH1 1129 aa17.38■□□□□ 0.37
RFC5-206ENST00000484086 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
RFC5-206ENST00000484086 SMC4Q9NTJ3 1288 aa17.37■□□□□ 0.37
RFC5-206ENST00000484086 UBR2Q8IWV8 1755 aa17.37■□□□□ 0.37
RFC5-206ENST00000484086 BCAR3O75815 825 aa17.36■□□□□ 0.37
RFC5-206ENST00000484086 RRP1P56182 461 aaKnown RBP17.36■□□□□ 0.37
RFC5-206ENST00000484086 CCDC30Q5VVM6 783 aa17.36■□□□□ 0.37
RFC5-206ENST00000484086 CCNL1Q9UK58 526 aaPredicted RBP17.36■□□□□ 0.37
RFC5-206ENST00000484086 PALLDQ8WX93 1383 aa17.36■□□□□ 0.37
RFC5-206ENST00000484086 CHD4Q14839 1912 aa17.35■□□□□ 0.37
RFC5-206ENST00000484086 YY1P25490 414 aa17.35■□□□□ 0.37
RFC5-206ENST00000484086 HDGFL1Q5TGJ6 251 aa17.35■□□□□ 0.37
RFC5-206ENST00000484086 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
RFC5-206ENST00000484086 VSIG10Q8N0Z9 540 aa17.35■□□□□ 0.37
RFC5-206ENST00000484086 SMARCC1Q92922 1105 aaPredicted RBP17.35■□□□□ 0.37
RFC5-206ENST00000484086 ARXQ96QS3 562 aa17.35■□□□□ 0.37
RFC5-206ENST00000484086 PTCD1O75127 700 aaKnown RBP17.34■□□□□ 0.37
RFC5-206ENST00000484086 MRPL50Q8N5N7 158 aaKnown RBP17.34■□□□□ 0.37
RFC5-206ENST00000484086 KIF16BQ96L93 1317 aa17.34■□□□□ 0.37
RFC5-206ENST00000484086 BCL2L13Q9BXK5 485 aa17.34■□□□□ 0.37
RFC5-206ENST00000484086 SMIM5Q71RC9 77 aa17.33■□□□□ 0.36
RFC5-206ENST00000484086 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.36
RFC5-206ENST00000484086 PRAMEF22A3QJZ6 481 aa17.32■□□□□ 0.36
RFC5-206ENST00000484086 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
RFC5-206ENST00000484086 TEX13AQ9BXU3 409 aaPredicted RBP17.32■□□□□ 0.36
RFC5-206ENST00000484086 COL5A3P25940 1745 aaPredicted RBP17.32■□□□□ 0.36
RFC5-206ENST00000484086 EIF2S2P20042 333 aaKnown RBP17.31■□□□□ 0.36
RFC5-206ENST00000484086 NLGN2Q8NFZ4 835 aa17.31■□□□□ 0.36
RFC5-206ENST00000484086 SLC16A10Q8TF71 515 aa17.31■□□□□ 0.36
RFC5-206ENST00000484086 TFCP2L1Q9NZI6 479 aa17.31■□□□□ 0.36
RFC5-206ENST00000484086 TCERG1O14776 1098 aaKnown RBP17.3■□□□□ 0.36
RFC5-206ENST00000484086 SLC4A9Q96Q91 983 aa17.3■□□□□ 0.36
RFC5-206ENST00000484086 RBM42Q9BTD8 480 aaKnown RBP17.3■□□□□ 0.36
RFC5-206ENST00000484086 ZNF831Q5JPB2 1677 aa17.29■□□□□ 0.36
RFC5-206ENST00000484086 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
RFC5-206ENST00000484086 LOC102724428A0A0B4J2F2 783 aa17.29■□□□□ 0.36
RFC5-206ENST00000484086 IPO8O15397 1037 aaKnown RBP17.29■□□□□ 0.36
RFC5-206ENST00000484086 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
RFC5-206ENST00000484086 SIK1P57059 783 aa17.29■□□□□ 0.36
RFC5-206ENST00000484086 NECTIN2Q92692 538 aa17.29■□□□□ 0.36
RFC5-206ENST00000484086 CHPF2Q9P2E5 772 aa17.29■□□□□ 0.36
RFC5-206ENST00000484086 DBF4Q9UBU7 674 aaPredicted RBP17.29■□□□□ 0.36
RFC5-206ENST00000484086 USP16Q9Y5T5 823 aa17.29■□□□□ 0.36
RFC5-206ENST00000484086 KIAA1551Q9HCM1 1747 aa17.28■□□□□ 0.36
RFC5-206ENST00000484086 PLIN1O60240 522 aa17.28■□□□□ 0.36
RFC5-206ENST00000484086 CANXP27824 592 aaKnown RBP17.28■□□□□ 0.36
RFC5-206ENST00000484086 ARHGAP45Q92619 1136 aa17.28■□□□□ 0.36
RFC5-206ENST00000484086 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
RFC5-206ENST00000484086 NOB1Q9ULX3 412 aaKnown RBP17.28■□□□□ 0.36
RFC5-206ENST00000484086 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
RFC5-206ENST00000484086 LAMB4A4D0S4 1761 aa17.28■□□□□ 0.36
RFC5-206ENST00000484086 STARD3NLO95772 234 aa17.27■□□□□ 0.36
RFC5-206ENST00000484086 NEFLP07196 543 aa17.27■□□□□ 0.36
RFC5-206ENST00000484086 ITPK1Q13572 414 aa17.27■□□□□ 0.36
RFC5-206ENST00000484086 ZKSCAN2Q63HK3 967 aa17.27■□□□□ 0.36
RFC5-206ENST00000484086 MSL1Q68DK7 614 aa17.27■□□□□ 0.36
RFC5-206ENST00000484086 DNAJC10Q8IXB1 793 aa17.27■□□□□ 0.36
RFC5-206ENST00000484086 LINC00116Q8NCU8 138 aa17.27■□□□□ 0.36
RFC5-206ENST00000484086 DDX21Q9NR30 783 aaKnown RBP eCLIP17.27■□□□□ 0.36
RFC5-206ENST00000484086 PTPRCP08575 1304 aa17.26■□□□□ 0.35
RFC5-206ENST00000484086 MYH14Q7Z406 1995 aaKnown RBP17.26■□□□□ 0.35
RFC5-206ENST00000484086 PDE3AQ14432 1141 aa17.26■□□□□ 0.35
RFC5-206ENST00000484086 PDIA6Q15084 440 aa17.26■□□□□ 0.35
RFC5-206ENST00000484086 ATF7IPQ6VMQ6 1270 aa17.26■□□□□ 0.35
RFC5-206ENST00000484086 HYPKQ9NX55 129 aa17.26■□□□□ 0.35
RFC5-206ENST00000484086 TJP1Q07157 1748 aa17.25■□□□□ 0.35
RFC5-206ENST00000484086 MS4A1P11836 297 aa17.25■□□□□ 0.35
RFC5-206ENST00000484086 TRIM27P14373 513 aa17.25■□□□□ 0.35
RFC5-206ENST00000484086 ATP6V1AP38606 617 aa17.25■□□□□ 0.35
RFC5-206ENST00000484086 FLIIQ13045 1269 aa17.25■□□□□ 0.35
RFC5-206ENST00000484086 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
RFC5-206ENST00000484086 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
RFC5-206ENST00000484086 PROSER3Q2NL68 480 aa17.24■□□□□ 0.35
RFC5-206ENST00000484086 G2E3Q7L622 706 aa17.24■□□□□ 0.35
RFC5-206ENST00000484086 LRP10Q7Z4F1 713 aa17.24■□□□□ 0.35
RFC5-206ENST00000484086 API5Q9BZZ5 524 aaKnown RBP17.24■□□□□ 0.35
RFC5-206ENST00000484086 C20orf194Q5TEA3 1177 aa17.23■□□□□ 0.35
RFC5-206ENST00000484086 ZNF784Q8NCA9 323 aaPredicted RBP17.23■□□□□ 0.35
RFC5-206ENST00000484086 NBPF26B4DH59 902 aa17.22■□□□□ 0.35
RFC5-206ENST00000484086 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.353e-7■■□□□ 12.2
RFC5-206ENST00000484086 NBPF10Q6P3W6 841 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms