RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 STARD3NLO95772 234 aa23.1■■□□□ 1.29
CPNE1-224ENST00000483359 EIF2S2P20042 333 aaKnown RBP23.1■■□□□ 1.29
CPNE1-224ENST00000483359 PIP4K2AP48426 406 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-224ENST00000483359 DUSP27Q5VZP5 1158 aa23.1■■□□□ 1.29
CPNE1-224ENST00000483359 SMIM5Q71RC9 77 aa23.1■■□□□ 1.29
CPNE1-224ENST00000483359 TSPYL6Q8N831 410 aa23.1■■□□□ 1.29
CPNE1-224ENST00000483359 STK32BQ9NY57 414 aa23.1■■□□□ 1.29
CPNE1-224ENST00000483359 MYH14Q7Z406 1995 aaKnown RBP23.1■■□□□ 1.29
CPNE1-224ENST00000483359 GNPATO15228 680 aa23.09■■□□□ 1.29
CPNE1-224ENST00000483359 EXOSC9Q06265 439 aaKnown RBP23.09■■□□□ 1.29
CPNE1-224ENST00000483359 NBPF14Q5TI25 921 aa23.09■■□□□ 1.29
CPNE1-224ENST00000483359 TEX13AQ9BXU3 409 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-224ENST00000483359 AKT1S1Q96B36 256 aa23.09■■□□□ 1.29
CPNE1-224ENST00000483359 ZBTB1Q9Y2K1 713 aa23.09■■□□□ 1.29
CPNE1-224ENST00000483359 TUBGCP6Q96RT7 1819 aa23.08■■□□□ 1.29
CPNE1-224ENST00000483359 SLC15A2Q16348 729 aa23.08■■□□□ 1.29
CPNE1-224ENST00000483359 TFCP2L1Q9NZI6 479 aa23.08■■□□□ 1.29
CPNE1-224ENST00000483359 CNTNAP4Q9C0A0 1308 aa23.08■■□□□ 1.28
CPNE1-224ENST00000483359 PHF14O94880 888 aa23.07■■□□□ 1.28
CPNE1-224ENST00000483359 A1BGP04217 495 aa23.07■■□□□ 1.28
CPNE1-224ENST00000483359 AMIGO3Q86WK7 504 aa23.07■■□□□ 1.28
CPNE1-224ENST00000483359 CCDC87Q9NVE4 849 aa23.07■■□□□ 1.28
CPNE1-224ENST00000483359 CANXP27824 592 aaKnown RBP23.07■■□□□ 1.28
CPNE1-224ENST00000483359 ZNF330Q9Y3S2 320 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-224ENST00000483359 INTS5Q6P9B9 1019 aaKnown RBP23.06■■□□□ 1.28
CPNE1-224ENST00000483359 UBR3Q6ZT12 1888 aa23.06■■□□□ 1.28
CPNE1-224ENST00000483359 PSDA5PKW4 1024 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-224ENST00000483359 R3HDM1Q15032 1099 aaKnown RBP23.05■■□□□ 1.28
CPNE1-224ENST00000483359 TWISTNBQ3B726 338 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-224ENST00000483359 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
CPNE1-224ENST00000483359 RC3H1Q5TC82 1133 aaKnown RBP23.03■■□□□ 1.28
CPNE1-224ENST00000483359 HMGB2P26583 209 aaKnown RBP23.03■■□□□ 1.28
CPNE1-224ENST00000483359 RTCBQ9Y3I0 505 aaKnown RBP23.03■■□□□ 1.28
CPNE1-224ENST00000483359 HOXB7P09629 217 aa23.02■■□□□ 1.28
CPNE1-224ENST00000483359 TRMT2AQ8IZ69 625 aaKnown RBP23.02■■□□□ 1.28
CPNE1-224ENST00000483359 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.01■■□□□ 1.27
CPNE1-224ENST00000483359 TCERG1O14776 1098 aaKnown RBP23.01■■□□□ 1.27
CPNE1-224ENST00000483359 ANXA1P04083 346 aa23.01■■□□□ 1.27
CPNE1-224ENST00000483359 MYL6BP14649 208 aa23.01■■□□□ 1.27
CPNE1-224ENST00000483359 PNPLA7Q6ZV29 1317 aa23.01■■□□□ 1.27
CPNE1-224ENST00000483359 NBPF26B4DH59 902 aa23.01■■□□□ 1.27
CPNE1-224ENST00000483359 NBPF10Q6P3W6 841 aaKnown RBP23.01■■□□□ 1.27
CPNE1-224ENST00000483359 NBPF15Q8N660 670 aa23.01■■□□□ 1.27
CPNE1-224ENST00000483359 MSH5O43196 834 aa23■■□□□ 1.27
CPNE1-224ENST00000483359 RPS6KA4O75676 772 aa23■■□□□ 1.27
CPNE1-224ENST00000483359 PDGFDQ9GZP0 370 aaPredicted RBP23■■□□□ 1.27
CPNE1-224ENST00000483359 CHPF2Q9P2E5 772 aa23■■□□□ 1.27
CPNE1-224ENST00000483359 SOS1Q07889 1333 aaPredicted RBP23■■□□□ 1.27
CPNE1-224ENST00000483359 PROSER3Q2NL68 480 aa23■■□□□ 1.27
CPNE1-224ENST00000483359 COL15A1P39059 1388 aa22.99■■□□□ 1.27
CPNE1-224ENST00000483359 VAMP4O75379 141 aa22.98■■□□□ 1.27
CPNE1-224ENST00000483359 SSFA2P28290 1259 aa22.98■■□□□ 1.27
CPNE1-224ENST00000483359 ARXQ96QS3 562 aa22.98■■□□□ 1.27
CPNE1-224ENST00000483359 C4AP0C0L4 1744 aa22.98■■□□□ 1.27
CPNE1-224ENST00000483359 QSER1Q2KHR3 1735 aa22.98■■□□□ 1.27
CPNE1-224ENST00000483359 COL23A1Q86Y22 540 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-224ENST00000483359 PDIA6Q15084 440 aa22.97■■□□□ 1.27
CPNE1-224ENST00000483359 TRAPPC3LQ5T215 181 aa22.97■■□□□ 1.27
CPNE1-224ENST00000483359 IL6STP40189 918 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-224ENST00000483359 NPM2Q86SE8 214 aaKnown RBP22.96■■□□□ 1.27
CPNE1-224ENST00000483359 ARHGEF1Q92888 912 aaKnown RBP22.96■■□□□ 1.27
CPNE1-224ENST00000483359 EIF5P55010 431 aaKnown RBP22.96■■□□□ 1.27
CPNE1-224ENST00000483359 CCDC30Q5VVM6 783 aa22.96■■□□□ 1.27
CPNE1-224ENST00000483359 ERBB4Q15303 1308 aa22.95■■□□□ 1.26
CPNE1-224ENST00000483359 DBF4Q9UBU7 674 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-224ENST00000483359 RFC4P35249 363 aa22.94■■□□□ 1.26
CPNE1-224ENST00000483359 DDX21Q9NR30 783 aaKnown RBP eCLIP22.94■■□□□ 1.26
CPNE1-224ENST00000483359 TBC1D2BQ9UPU7 963 aa22.94■■□□□ 1.26
CPNE1-224ENST00000483359 CASZ1Q86V15 1759 aa22.93■■□□□ 1.26
CPNE1-224ENST00000483359 STK31Q9BXU1 1019 aa22.93■■□□□ 1.26
CPNE1-224ENST00000483359 SRP68Q9UHB9 627 aaKnown RBP22.93■■□□□ 1.26
CPNE1-224ENST00000483359 ADRA2BP18089 450 aa22.92■■□□□ 1.26
CPNE1-224ENST00000483359 AIMP1Q12904 312 aaKnown RBP22.92■■□□□ 1.26
CPNE1-224ENST00000483359 FLAD1Q8NFF5 587 aa22.92■■□□□ 1.26
CPNE1-224ENST00000483359 LRP10Q7Z4F1 713 aa22.92■■□□□ 1.26
CPNE1-224ENST00000483359 BCL2L13Q9BXK5 485 aa22.92■■□□□ 1.26
CPNE1-224ENST00000483359 DZIP3Q86Y13 1208 aaKnown RBP22.91■■□□□ 1.26
CPNE1-224ENST00000483359 PHAXQ9H814 394 aaKnown RBP22.9■■□□□ 1.26
CPNE1-224ENST00000483359 SLC4A2P04920 1241 aa22.9■■□□□ 1.26
CPNE1-224ENST00000483359 TTLL7Q6ZT98 887 aa22.9■■□□□ 1.26
CPNE1-224ENST00000483359 XAGE3Q8WTP9 111 aa22.9■■□□□ 1.26
CPNE1-224ENST00000483359 ZBTB7AO95365 584 aa22.89■■□□□ 1.26
CPNE1-224ENST00000483359 USPL1Q5W0Q7 1092 aa22.89■■□□□ 1.26
CPNE1-224ENST00000483359 MSL1Q68DK7 614 aa22.89■■□□□ 1.26
CPNE1-224ENST00000483359 CHMP4AQ9BY43 222 aa22.89■■□□□ 1.26
CPNE1-224ENST00000483359 USP42Q9H9J4 1324 aaKnown RBP22.89■■□□□ 1.26
CPNE1-224ENST00000483359 A0A087WZG4 1122 aa22.89■■□□□ 1.25
CPNE1-224ENST00000483359 ZPR1O75312 459 aa22.89■■□□□ 1.25
CPNE1-224ENST00000483359 COPS6Q7L5N1 327 aa22.89■■□□□ 1.25
CPNE1-224ENST00000483359 HYPKQ9NX55 129 aa22.89■■□□□ 1.25
CPNE1-224ENST00000483359 SCN7AQ01118 1682 aa22.88■■□□□ 1.25
CPNE1-224ENST00000483359 ZBTB3Q9H5J0 574 aa22.88■■□□□ 1.25
CPNE1-224ENST00000483359 BCORQ6W2J9 1755 aa22.87■■□□□ 1.25
CPNE1-224ENST00000483359 KIF6Q6ZMV9 814 aa22.87■■□□□ 1.25
CPNE1-224ENST00000483359 G2E3Q7L622 706 aa22.87■■□□□ 1.25
CPNE1-224ENST00000483359 SSH1Q8WYL5 1049 aa22.87■■□□□ 1.25
CPNE1-224ENST00000483359 NARFQ9UHQ1 456 aa22.87■■□□□ 1.25
CPNE1-224ENST00000483359 CAMTA2O94983 1202 aa22.85■■□□□ 1.25
CPNE1-224ENST00000483359 CT47B1P0C2W7 299 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-224ENST00000483359 SMC4Q9NTJ3 1288 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms