RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 TJP1Q07157 1748 aa16.24■□□□□ 0.19
MRPL55-229ENST00000483159 COL24A1Q17RW2 1714 aa16.24■□□□□ 0.19
MRPL55-229ENST00000483159 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
MRPL55-229ENST00000483159 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
MRPL55-229ENST00000483159 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
MRPL55-229ENST00000483159 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
MRPL55-229ENST00000483159 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
MRPL55-229ENST00000483159 ZBTB1Q9Y2K1 713 aa16.23■□□□□ 0.19
MRPL55-229ENST00000483159 RRP7AQ9Y3A4 280 aaKnown RBP16.23■□□□□ 0.19
MRPL55-229ENST00000483159 GYS1P13807 737 aa16.22■□□□□ 0.19
MRPL55-229ENST00000483159 EIF5P55010 431 aaKnown RBP16.22■□□□□ 0.19
MRPL55-229ENST00000483159 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
MRPL55-229ENST00000483159 USP42Q9H9J4 1324 aaKnown RBP16.21■□□□□ 0.19
MRPL55-229ENST00000483159 A0A087WZG4 1122 aa16.21■□□□□ 0.19
MRPL55-229ENST00000483159 ZPR1O75312 459 aa16.21■□□□□ 0.19
MRPL55-229ENST00000483159 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
MRPL55-229ENST00000483159 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.19
MRPL55-229ENST00000483159 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
MRPL55-229ENST00000483159 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
MRPL55-229ENST00000483159 APAF1O14727 1248 aa16.2■□□□□ 0.18
MRPL55-229ENST00000483159 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
MRPL55-229ENST00000483159 NARFQ9UHQ1 456 aa16.2■□□□□ 0.18
MRPL55-229ENST00000483159 CD2APQ9Y5K6 639 aa16.2■□□□□ 0.18
MRPL55-229ENST00000483159 MYH14Q7Z406 1995 aaKnown RBP16.19■□□□□ 0.18
MRPL55-229ENST00000483159 COL15A1P39059 1388 aa16.19■□□□□ 0.18
MRPL55-229ENST00000483159 GIGYF1O75420 1035 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-229ENST00000483159 MMP10P09238 476 aa16.19■□□□□ 0.18
MRPL55-229ENST00000483159 NPM2Q86SE8 214 aaKnown RBP16.19■□□□□ 0.18
MRPL55-229ENST00000483159 PIAS4Q8N2W9 510 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-229ENST00000483159 TSPYL4Q9UJ04 414 aa16.19■□□□□ 0.18
MRPL55-229ENST00000483159 CHL1O00533 1208 aa16.18■□□□□ 0.18
MRPL55-229ENST00000483159 A1BGP04217 495 aa16.18■□□□□ 0.18
MRPL55-229ENST00000483159 CALD1Q05682 793 aaKnown RBP16.18■□□□□ 0.18
MRPL55-229ENST00000483159 SRP68Q9UHB9 627 aaKnown RBP16.18■□□□□ 0.18
MRPL55-229ENST00000483159 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
MRPL55-229ENST00000483159 PRAMEF22A3QJZ6 481 aa16.17■□□□□ 0.18
MRPL55-229ENST00000483159 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
MRPL55-229ENST00000483159 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
MRPL55-229ENST00000483159 FKBP8Q14318 412 aa16.16■□□□□ 0.18
MRPL55-229ENST00000483159 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
MRPL55-229ENST00000483159 PARP3Q9Y6F1 533 aa16.16■□□□□ 0.18
MRPL55-229ENST00000483159 TM4SF1P30408 202 aa16.15■□□□□ 0.18
MRPL55-229ENST00000483159 CFAP44Q96MT7 982 aa16.15■□□□□ 0.18
MRPL55-229ENST00000483159 CCDC27Q2M243 656 aa16.14■□□□□ 0.17
MRPL55-229ENST00000483159 NBPF26B4DH59 902 aa16.13■□□□□ 0.17
MRPL55-229ENST00000483159 RGL2O15211 777 aa16.13■□□□□ 0.17
MRPL55-229ENST00000483159 NBPF10Q6P3W6 841 aaKnown RBP16.13■□□□□ 0.17
MRPL55-229ENST00000483159 NBPF15Q8N660 670 aa16.13■□□□□ 0.17
MRPL55-229ENST00000483159 BCL2L12Q9HB09 334 aa16.13■□□□□ 0.17
MRPL55-229ENST00000483159 TBC1D2BQ9UPU7 963 aa16.13■□□□□ 0.17
MRPL55-229ENST00000483159 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-229ENST00000483159 ZNF853P0CG23 659 aa16.12■□□□□ 0.17
MRPL55-229ENST00000483159 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
MRPL55-229ENST00000483159 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
MRPL55-229ENST00000483159 LAS1LQ9Y4W2 734 aaKnown RBP16.12■□□□□ 0.17
MRPL55-229ENST00000483159 KDM3BQ7LBC6 1761 aa16.12■□□□□ 0.17
MRPL55-229ENST00000483159 ERBB4Q15303 1308 aa16.12■□□□□ 0.17
MRPL55-229ENST00000483159 C4AP0C0L4 1744 aa16.11■□□□□ 0.17
MRPL55-229ENST00000483159 POLRMTO00411 1230 aaKnown RBP16.11■□□□□ 0.17
MRPL55-229ENST00000483159 TGFB2P61812 414 aa16.11■□□□□ 0.17
MRPL55-229ENST00000483159 GNAI1P63096 354 aa16.11■□□□□ 0.17
MRPL55-229ENST00000483159 DDR1Q08345 913 aa16.11■□□□□ 0.17
MRPL55-229ENST00000483159 NFIXQ14938 502 aa16.11■□□□□ 0.17
MRPL55-229ENST00000483159 CLEC4GQ6UXB4 293 aa16.11■□□□□ 0.17
MRPL55-229ENST00000483159 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
MRPL55-229ENST00000483159 CAMTA2O94983 1202 aa16.1■□□□□ 0.17
MRPL55-229ENST00000483159 HOXB7P09629 217 aa16.1■□□□□ 0.17
MRPL55-229ENST00000483159 PIP4K2AP48426 406 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-229ENST00000483159 NGEFQ8N5V2 710 aa16.1■□□□□ 0.17
MRPL55-229ENST00000483159 WWC1Q8IX03 1113 aa16.09■□□□□ 0.17
MRPL55-229ENST00000483159 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
MRPL55-229ENST00000483159 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
MRPL55-229ENST00000483159 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
MRPL55-229ENST00000483159 GPR162Q16538 588 aa16.08■□□□□ 0.16
MRPL55-229ENST00000483159 C10orf71Q711Q0 1435 aa16.08■□□□□ 0.16
MRPL55-229ENST00000483159 ERVV-1B6SEH8 477 aa16.07■□□□□ 0.16
MRPL55-229ENST00000483159 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
MRPL55-229ENST00000483159 SERPINB2P05120 415 aa16.07■□□□□ 0.16
MRPL55-229ENST00000483159 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
MRPL55-229ENST00000483159 TBC1D9BQ66K14 1250 aa16.07■□□□□ 0.16
MRPL55-229ENST00000483159 SETDB2Q96T68 719 aa16.07■□□□□ 0.16
MRPL55-229ENST00000483159 IL16Q14005 1332 aa16.06■□□□□ 0.16
MRPL55-229ENST00000483159 PDIA6Q15084 440 aa16.06■□□□□ 0.16
MRPL55-229ENST00000483159 CHMP4AQ9BY43 222 aa16.06■□□□□ 0.16
MRPL55-229ENST00000483159 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
MRPL55-229ENST00000483159 MYL6BP14649 208 aa16.05■□□□□ 0.16
MRPL55-229ENST00000483159 BICDL1Q6ZP65 573 aa16.05■□□□□ 0.16
MRPL55-229ENST00000483159 WDR63Q8IWG1 891 aa16.05■□□□□ 0.16
MRPL55-229ENST00000483159 CARMIL3Q8ND23 1372 aa16.04■□□□□ 0.16
MRPL55-229ENST00000483159 KRT24Q2M2I5 525 aa16.04■□□□□ 0.16
MRPL55-229ENST00000483159 DUSP27Q5VZP5 1158 aa16.04■□□□□ 0.16
MRPL55-229ENST00000483159 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
MRPL55-229ENST00000483159 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
MRPL55-229ENST00000483159 DDX21Q9NR30 783 aaKnown RBP eCLIP16.04■□□□□ 0.16
MRPL55-229ENST00000483159 LAMB4A4D0S4 1761 aa16.04■□□□□ 0.16
MRPL55-229ENST00000483159 MAP3K15Q6ZN16 1313 aa16.03■□□□□ 0.16
MRPL55-229ENST00000483159 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
MRPL55-229ENST00000483159 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
MRPL55-229ENST00000483159 PELP1Q8IZL8 1130 aaKnown RBP16.03■□□□□ 0.16
MRPL55-229ENST00000483159 DBF4Q9UBU7 674 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms