RNA–Protein interactions for RNA: ENST00000483145.1

CCDC57-209, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-209ENST00000483145 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
CCDC57-209ENST00000483145 GIGYF1O75420 1035 aaPredicted RBP13.54□□□□□ -0.24
CCDC57-209ENST00000483145 SNRPA1P09661 255 aaKnown RBP13.54□□□□□ -0.24
CCDC57-209ENST00000483145 HMGB2P26583 209 aaKnown RBP13.54□□□□□ -0.24
CCDC57-209ENST00000483145 KCNQ4P56696 695 aa13.54□□□□□ -0.24
CCDC57-209ENST00000483145 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
CCDC57-209ENST00000483145 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
CCDC57-209ENST00000483145 TAF1LQ8IZX4 1826 aa13.53□□□□□ -0.24
CCDC57-209ENST00000483145 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
CCDC57-209ENST00000483145 SIK1P57059 783 aa13.53□□□□□ -0.24
CCDC57-209ENST00000483145 TWISTNBQ3B726 338 aaPredicted RBP13.53□□□□□ -0.24
CCDC57-209ENST00000483145 TSPYL6Q8N831 410 aa13.53□□□□□ -0.24
CCDC57-209ENST00000483145 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
CCDC57-209ENST00000483145 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
CCDC57-209ENST00000483145 PTGER2P43116 358 aa13.52□□□□□ -0.25
CCDC57-209ENST00000483145 ZNF428Q96B54 188 aa13.52□□□□□ -0.25
CCDC57-209ENST00000483145 SLC4A9Q96Q91 983 aa13.52□□□□□ -0.25
CCDC57-209ENST00000483145 CHMP4AQ9BY43 222 aa13.52□□□□□ -0.25
CCDC57-209ENST00000483145 VAMP4O75379 141 aa13.51□□□□□ -0.25
CCDC57-209ENST00000483145 TEX13AQ9BXU3 409 aaPredicted RBP13.51□□□□□ -0.25
CCDC57-209ENST00000483145 ELL2O00472 640 aaPredicted RBP13.5□□□□□ -0.25
CCDC57-209ENST00000483145 MSH5O43196 834 aa13.5□□□□□ -0.25
CCDC57-209ENST00000483145 POLD1P28340 1107 aa13.5□□□□□ -0.25
CCDC57-209ENST00000483145 SLC16A10Q8TF71 515 aa13.5□□□□□ -0.25
CCDC57-209ENST00000483145 ARXQ96QS3 562 aa13.5□□□□□ -0.25
CCDC57-209ENST00000483145 MYH14Q7Z406 1995 aaKnown RBP13.5□□□□□ -0.25
CCDC57-209ENST00000483145 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
CCDC57-209ENST00000483145 ERBB4Q15303 1308 aa13.49□□□□□ -0.25
CCDC57-209ENST00000483145 PNPLA7Q6ZV29 1317 aa13.49□□□□□ -0.25
CCDC57-209ENST00000483145 PRAMEF22A3QJZ6 481 aa13.49□□□□□ -0.25
CCDC57-209ENST00000483145 ATP6V1AP38606 617 aa13.49□□□□□ -0.25
CCDC57-209ENST00000483145 HDGFL1Q5TGJ6 251 aa13.49□□□□□ -0.25
CCDC57-209ENST00000483145 DNAJC10Q8IXB1 793 aa13.49□□□□□ -0.25
CCDC57-209ENST00000483145 FHDC1Q9C0D6 1143 aaPredicted RBP13.49□□□□□ -0.25
CCDC57-209ENST00000483145 STARD3NLO95772 234 aa13.48□□□□□ -0.25
CCDC57-209ENST00000483145 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
CCDC57-209ENST00000483145 ITPK1Q13572 414 aa13.48□□□□□ -0.25
CCDC57-209ENST00000483145 CCDC30Q5VVM6 783 aa13.48□□□□□ -0.25
CCDC57-209ENST00000483145 USP16Q9Y5T5 823 aa13.48□□□□□ -0.25
CCDC57-209ENST00000483145 C4BP0C0L5 1744 aa13.47□□□□□ -0.25
CCDC57-209ENST00000483145 CYP19A1P11511 503 aaPredicted RBP13.47□□□□□ -0.25
CCDC57-209ENST00000483145 YY1P25490 414 aa13.47□□□□□ -0.25
CCDC57-209ENST00000483145 RARSP54136 660 aaKnown RBP13.47□□□□□ -0.25
CCDC57-209ENST00000483145 ALDH1L2Q3SY69 923 aa13.47□□□□□ -0.25
CCDC57-209ENST00000483145 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
CCDC57-209ENST00000483145 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
CCDC57-209ENST00000483145 SYT17Q9BSW7 474 aa13.47□□□□□ -0.25
CCDC57-209ENST00000483145 RCAN3Q9UKA8 241 aa13.47□□□□□ -0.25
CCDC57-209ENST00000483145 TUBGCP6Q96RT7 1819 aa13.47□□□□□ -0.25
CCDC57-209ENST00000483145 CNTNAP4Q9C0A0 1308 aa13.46□□□□□ -0.25
CCDC57-209ENST00000483145 EIF2S2P20042 333 aaKnown RBP13.46□□□□□ -0.25
CCDC57-209ENST00000483145 LINC00116Q8NCU8 138 aa13.46□□□□□ -0.25
CCDC57-209ENST00000483145 AK7Q96M32 723 aa13.46□□□□□ -0.25
CCDC57-209ENST00000483145 BRPF1P55201 1214 aaPredicted RBP13.45□□□□□ -0.26
CCDC57-209ENST00000483145 SSH1Q8WYL5 1049 aa13.45□□□□□ -0.26
CCDC57-209ENST00000483145 STK31Q9BXU1 1019 aa13.45□□□□□ -0.26
CCDC57-209ENST00000483145 CHPF2Q9P2E5 772 aa13.45□□□□□ -0.26
CCDC57-209ENST00000483145 DBF4Q9UBU7 674 aaPredicted RBP13.45□□□□□ -0.26
CCDC57-209ENST00000483145 UBR3Q6ZT12 1888 aa13.44□□□□□ -0.26
CCDC57-209ENST00000483145 CRKLP46109 303 aaKnown RBP13.44□□□□□ -0.26
CCDC57-209ENST00000483145 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
CCDC57-209ENST00000483145 COL23A1Q86Y22 540 aaPredicted RBP13.44□□□□□ -0.26
CCDC57-209ENST00000483145 FLAD1Q8NFF5 587 aa13.44□□□□□ -0.26
CCDC57-209ENST00000483145 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
CCDC57-209ENST00000483145 DDX21Q9NR30 783 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC57-209ENST00000483145 SMC4Q9NTJ3 1288 aa13.44□□□□□ -0.26
CCDC57-209ENST00000483145 CCDC87Q9NVE4 849 aa13.44□□□□□ -0.26
CCDC57-209ENST00000483145 NBPF26B4DH59 902 aa13.43□□□□□ -0.26
CCDC57-209ENST00000483145 A1BGP04217 495 aa13.43□□□□□ -0.26
CCDC57-209ENST00000483145 PDIA6Q15084 440 aa13.43□□□□□ -0.26
CCDC57-209ENST00000483145 NBPF10Q6P3W6 841 aaKnown RBP13.43□□□□□ -0.26
CCDC57-209ENST00000483145 INTS5Q6P9B9 1019 aaKnown RBP13.43□□□□□ -0.26
CCDC57-209ENST00000483145 NBPF15Q8N660 670 aa13.43□□□□□ -0.26
CCDC57-209ENST00000483145 HYPKQ9NX55 129 aa13.43□□□□□ -0.26
CCDC57-209ENST00000483145 KIF16BQ96L93 1317 aa13.42□□□□□ -0.26
CCDC57-209ENST00000483145 PHF14O94880 888 aa13.42□□□□□ -0.26
CCDC57-209ENST00000483145 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
CCDC57-209ENST00000483145 LRP10Q7Z4F1 713 aa13.42□□□□□ -0.26
CCDC57-209ENST00000483145 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
CCDC57-209ENST00000483145 BCL2L13Q9BXK5 485 aa13.42□□□□□ -0.26
CCDC57-209ENST00000483145 ZBTB1Q9Y2K1 713 aa13.42□□□□□ -0.26
CCDC57-209ENST00000483145 TCERG1O14776 1098 aaKnown RBP13.41□□□□□ -0.26
CCDC57-209ENST00000483145 BCAR3O75815 825 aa13.41□□□□□ -0.26
CCDC57-209ENST00000483145 SLC4A2P04920 1241 aa13.41□□□□□ -0.26
CCDC57-209ENST00000483145 MSL1Q68DK7 614 aa13.41□□□□□ -0.26
CCDC57-209ENST00000483145 ANXA1P04083 346 aa13.4□□□□□ -0.26
CCDC57-209ENST00000483145 IL6STP40189 918 aaPredicted RBP13.4□□□□□ -0.26
CCDC57-209ENST00000483145 PIP4K2AP48426 406 aaPredicted RBP13.4□□□□□ -0.26
CCDC57-209ENST00000483145 EIF5P55010 431 aaKnown RBP13.4□□□□□ -0.26
CCDC57-209ENST00000483145 GPR162Q16538 588 aa13.4□□□□□ -0.26
CCDC57-209ENST00000483145 C4AP0C0L4 1744 aa13.39□□□□□ -0.27
CCDC57-209ENST00000483145 GNPATO15228 680 aa13.39□□□□□ -0.27
CCDC57-209ENST00000483145 RPS6KA4O75676 772 aa13.39□□□□□ -0.27
CCDC57-209ENST00000483145 MYL6BP14649 208 aa13.39□□□□□ -0.27
CCDC57-209ENST00000483145 CANXP27824 592 aaKnown RBP13.39□□□□□ -0.27
CCDC57-209ENST00000483145 FLIIQ13045 1269 aa13.39□□□□□ -0.27
CCDC57-209ENST00000483145 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
CCDC57-209ENST00000483145 COL15A1P39059 1388 aa13.39□□□□□ -0.27
CCDC57-209ENST00000483145 BCORQ6W2J9 1755 aa13.39□□□□□ -0.27
CCDC57-209ENST00000483145 COL24A1Q17RW2 1714 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms