RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 GTF2IP78347 998 aa7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 ZNF295-AS1Q8N0V1 137 aa7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 CNTNAP5Q8WYK1 1306 aa7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 KLRG1Q96E93 195 aa7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 SLC4A9Q96Q91 983 aa7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 OXCT2Q9BYC2 517 aaPredicted RBP7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 IQSEC3Q9UPP2 1182 aaPredicted RBP7.14□□□□□ -1.27
LAPTM4A-202ENST00000483117 USP17L5A8MUK1 530 aa7.13□□□□□ -1.27
LAPTM4A-202ENST00000483117 OIP5O43482 229 aa7.13□□□□□ -1.27
LAPTM4A-202ENST00000483117 PROCP04070 461 aa7.13□□□□□ -1.27
LAPTM4A-202ENST00000483117 ITGB2P05107 769 aa7.13□□□□□ -1.27
LAPTM4A-202ENST00000483117 PSME1Q06323 249 aa7.13□□□□□ -1.27
LAPTM4A-202ENST00000483117 MTFR1Q15390 333 aa7.13□□□□□ -1.27
LAPTM4A-202ENST00000483117 NFATC2IPQ8NCF5 419 aa7.13□□□□□ -1.27
LAPTM4A-202ENST00000483117 NDFIP2Q9NV92 336 aa7.13□□□□□ -1.27
LAPTM4A-202ENST00000483117 DNAAF2Q9NVR5 837 aaKnown RBP7.13□□□□□ -1.27
LAPTM4A-202ENST00000483117 CDK2AP1O14519 115 aa7.12□□□□□ -1.27
LAPTM4A-202ENST00000483117 C2CD2LO14523 706 aa7.12□□□□□ -1.27
LAPTM4A-202ENST00000483117 FGFR3P22607 806 aa7.12□□□□□ -1.27
LAPTM4A-202ENST00000483117 CTBSQ01459 385 aa7.12□□□□□ -1.27
LAPTM4A-202ENST00000483117 C1orf229Q6ZS94 237 aaPredicted RBP7.12□□□□□ -1.27
LAPTM4A-202ENST00000483117 ZCCHC2Q9C0B9 1178 aaKnown RBP7.12□□□□□ -1.27
LAPTM4A-202ENST00000483117 ZNF358Q9NW07 568 aa7.12□□□□□ -1.27
LAPTM4A-202ENST00000483117 CABP1Q9NZU7 370 aa7.12□□□□□ -1.27
LAPTM4A-202ENST00000483117 ATXN7L1Q9ULK2 861 aaPredicted RBP7.12□□□□□ -1.27
LAPTM4A-202ENST00000483117 PARP3Q9Y6F1 533 aa7.12□□□□□ -1.27
LAPTM4A-202ENST00000483117 SHISA8B8ZZ34 492 aa7.11□□□□□ -1.27
LAPTM4A-202ENST00000483117 LZTS3O60299 673 aaPredicted RBP7.11□□□□□ -1.27
LAPTM4A-202ENST00000483117 BMP4P12644 408 aa7.11□□□□□ -1.27
LAPTM4A-202ENST00000483117 HDGFL1Q5TGJ6 251 aa7.11□□□□□ -1.27
LAPTM4A-202ENST00000483117 UCN2Q96RP3 112 aa7.11□□□□□ -1.27
LAPTM4A-202ENST00000483117 A0A1W2PNR3 127 aa7.1□□□□□ -1.27
LAPTM4A-202ENST00000483117 ARSJQ5FYB0 599 aaPredicted RBP7.1□□□□□ -1.27
LAPTM4A-202ENST00000483117 GALNT6Q8NCL4 622 aa7.1□□□□□ -1.27
LAPTM4A-202ENST00000483117 C1orf216Q8TAB5 229 aa7.1□□□□□ -1.27
LAPTM4A-202ENST00000483117 CLUAP1Q96AJ1 413 aa7.1□□□□□ -1.27
LAPTM4A-202ENST00000483117 BACH1O14867 736 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 NBPF1Q3BBV0 1214 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 TBCELQ5QJ74 424 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 FIGNL1Q6PIW4 674 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 NLRP8Q86W28 1048 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 ZDHHC1Q8WTX9 485 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 ZIC5Q96T25 663 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 KRTAP4-2Q9BYR5 136 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 GOLGA2P5Q9HBQ8 144 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 LRRC4BQ9NT99 713 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 SCHIP1Q9P0W5 487 aaPredicted RBP7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 HCN2Q9UL51 889 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 KIAA1024Q9UPX6 916 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 PCDHGC4Q9Y5F7 938 aa7.09□□□□□ -1.27
LAPTM4A-202ENST00000483117 DCDC2BA2VCK2 349 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 USP17L3A6NCW0 530 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 USP17L4A6NCW7 530 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 PHF20L1A8MW92 1017 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 ZBTB7BO15156 539 aaPredicted RBP7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 ATXN7O15265 892 aaPredicted RBP7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 TATP17735 454 aaPredicted RBP7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 TXLNAP40222 546 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 SNRPNP63162 240 aaKnown RBP7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 USP17L2Q6R6M4 530 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 USP17L1Q7RTZ2 530 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 PODNQ7Z5L7 613 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 TNS4Q8IZW8 715 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 BEND7Q8N7W2 519 aaPredicted RBP7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 EDARADDQ8WWZ3 215 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 ZDHHC3Q9NYG2 299 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 GGA1Q9UJY5 639 aa7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 GDF2Q9UK05 429 aaPredicted RBP7.08□□□□□ -1.28
LAPTM4A-202ENST00000483117 MAPTP10636 758 aaKnown RBP7.07□□□□□ -1.28
LAPTM4A-202ENST00000483117 EPHA4P54764 986 aa7.07□□□□□ -1.28
LAPTM4A-202ENST00000483117 CLDN10P78369 228 aa7.07□□□□□ -1.28
LAPTM4A-202ENST00000483117 SLC9A9Q8IVB4 645 aa7.07□□□□□ -1.28
LAPTM4A-202ENST00000483117 GOLGA6L1Q8N7Z2 621 aa7.07□□□□□ -1.28
LAPTM4A-202ENST00000483117 TPCN2Q8NHX9 752 aa7.07□□□□□ -1.28
LAPTM4A-202ENST00000483117 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
LAPTM4A-202ENST00000483117 KHNYNO15037 678 aaKnown RBP7.06□□□□□ -1.28
LAPTM4A-202ENST00000483117 ATP9BO43861 1147 aa7.06□□□□□ -1.28
LAPTM4A-202ENST00000483117 CD33P20138 364 aa7.06□□□□□ -1.28
LAPTM4A-202ENST00000483117 TNP2Q05952 138 aa7.06□□□□□ -1.28
LAPTM4A-202ENST00000483117 TMEM132AQ24JP5 1023 aa7.06□□□□□ -1.28
LAPTM4A-202ENST00000483117 CCDC102BQ68D86 513 aa7.06□□□□□ -1.28
LAPTM4A-202ENST00000483117 TRIM50Q86XT4 487 aa7.06□□□□□ -1.28
LAPTM4A-202ENST00000483117 PLEKHM2Q8IWE5 1019 aa7.06□□□□□ -1.28
LAPTM4A-202ENST00000483117 L3MBTL2Q969R5 705 aa7.06□□□□□ -1.28
LAPTM4A-202ENST00000483117 DCAF5Q96JK2 942 aa7.06□□□□□ -1.28
LAPTM4A-202ENST00000483117 NOS2P35228 1153 aa7.05□□□□□ -1.28
LAPTM4A-202ENST00000483117 SH3PXD2AQ5TCZ1 1133 aa7.05□□□□□ -1.28
LAPTM4A-202ENST00000483117 BICDL1Q6ZP65 573 aa7.05□□□□□ -1.28
LAPTM4A-202ENST00000483117 KRTAP17-1Q9BYP8 105 aa7.05□□□□□ -1.28
LAPTM4A-202ENST00000483117 RRAGCQ9HB90 399 aa7.05□□□□□ -1.28
LAPTM4A-202ENST00000483117 MKRN1Q9UHC7 482 aaKnown RBP7.05□□□□□ -1.28
LAPTM4A-202ENST00000483117 GJA3Q9Y6H8 435 aa7.05□□□□□ -1.28
LAPTM4A-202ENST00000483117 NEURL1BA8MQ27 555 aa7.04□□□□□ -1.28
LAPTM4A-202ENST00000483117 ATP1A2P50993 1020 aa7.04□□□□□ -1.28
LAPTM4A-202ENST00000483117 TEAD4Q15561 434 aa7.04□□□□□ -1.28
LAPTM4A-202ENST00000483117 SLCO4C1Q6ZQN7 724 aa7.04□□□□□ -1.28
LAPTM4A-202ENST00000483117 PROSER2Q86WR7 435 aaPredicted RBP7.04□□□□□ -1.28
LAPTM4A-202ENST00000483117 FNBP4Q8N3X1 1017 aaPredicted RBP7.04□□□□□ -1.28
LAPTM4A-202ENST00000483117 OGFOD1Q8N543 542 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms