RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 ALG1LQ6GMV1 187 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 ALKBH2Q6NS38 261 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 TMC7Q7Z402 723 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 PACS2Q86VP3 889 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 ZNF454Q8N9F8 522 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 MKL1Q969V6 931 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 PRIMPOLQ96LW4 560 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 TYW1Q9NV66 732 aaKnown RBP6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 IFT57Q9NWB7 429 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 FKBPLQ9UIM3 349 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 TSR3Q9UJK0 312 aaKnown RBP6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 CREB3O43889 395 aa6.84□□□□□ -1.31
R3HDM1-216ENST00000483065 MAPK8P45983 427 aa6.84□□□□□ -1.31
R3HDM1-216ENST00000483065 LDLRAD1Q5T700 205 aa6.84□□□□□ -1.31
R3HDM1-216ENST00000483065 NUDT18Q6ZVK8 323 aa6.84□□□□□ -1.31
R3HDM1-216ENST00000483065 HELQQ8TDG4 1101 aa6.84□□□□□ -1.31
R3HDM1-216ENST00000483065 VTI1AQ96AJ9 217 aa6.84□□□□□ -1.31
R3HDM1-216ENST00000483065 DUSP9Q99956 384 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-216ENST00000483065 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.84□□□□□ -1.31
R3HDM1-216ENST00000483065 IRF2BPLQ9H1B7 796 aa6.84□□□□□ -1.31
R3HDM1-216ENST00000483065 DNMT3AQ9Y6K1 912 aaPredicted RBP6.84□□□□□ -1.31
R3HDM1-216ENST00000483065 PTK2Q05397 1052 aa6.83□□□□□ -1.32
R3HDM1-216ENST00000483065 PLEKHG6Q3KR16 790 aa6.83□□□□□ -1.32
R3HDM1-216ENST00000483065 RNF20Q5VTR2 975 aa6.83□□□□□ -1.32
R3HDM1-216ENST00000483065 JAZF1Q86VZ6 243 aa6.83□□□□□ -1.32
R3HDM1-216ENST00000483065 CCDC146Q8IYE0 955 aa6.83□□□□□ -1.32
R3HDM1-216ENST00000483065 CRIPAKQ8N1N5 446 aa6.83□□□□□ -1.32
R3HDM1-216ENST00000483065 CEP89Q96ST8 783 aa6.83□□□□□ -1.32
R3HDM1-216ENST00000483065 KRTAP4-12Q9BQ66 201 aa6.83□□□□□ -1.32
R3HDM1-216ENST00000483065 HINFPQ9BQA5 517 aa6.83□□□□□ -1.32
R3HDM1-216ENST00000483065 PNMA3Q9UL41 463 aa6.83□□□□□ -1.32
R3HDM1-216ENST00000483065 K7ELQ4 463 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 CENPBP07199 599 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 NPR3P17342 541 aa6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 SCNN1AP37088 669 aa6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 CLDN10P78369 228 aa6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 OS9Q13438 667 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 RETREG3Q86VR2 466 aa6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 ARMC2Q8NEN0 867 aa6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 CRELD1Q96HD1 420 aa6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 SPOCK3Q9BQ16 436 aa6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 DMGDHQ9UI17 866 aaKnown RBP6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 MRPL42Q9Y6G3 142 aaKnown RBP6.82□□□□□ -1.32
R3HDM1-216ENST00000483065 HDGFP51858 240 aaKnown RBP6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 BIRC2Q13490 618 aa6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 ECM1Q16610 540 aa6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 Q3C1V9 767 aa6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 CCDC102BQ68D86 513 aa6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 APBB1IPQ7Z5R6 666 aaPredicted RBP6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 GPKOWQ92917 476 aaPredicted RBP eCLIP6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 TATDN2Q93075 761 aa6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 RELTQ969Z4 430 aa6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 DDX56Q9NY93 547 aaKnown RBP6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 CHIC2Q9UKJ5 165 aa6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 HPS5Q9UPZ3 1129 aa6.81□□□□□ -1.32
R3HDM1-216ENST00000483065 PRC1O43663 620 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 SH3BP5O60239 455 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 TNNI2P48788 182 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 GTF2IP78347 998 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 GUCA2AQ02747 115 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 EHHADHQ08426 723 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 AAMPQ13685 434 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 ARSHQ5FYA8 562 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 HS2ST1Q7LGA3 356 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 USP48Q86UV5 1035 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 PHTF2Q8N3S3 785 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 TERF2IPQ9NYB0 399 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 DDX41Q9UJV9 622 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 PCDHB9Q9Y5E1 797 aa6.8□□□□□ -1.32
R3HDM1-216ENST00000483065 KCNH2Q12809 1159 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 PLEKHG4Q58EX7 1191 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 LYPD8Q6UX82 237 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 TMEM151AQ8N4L1 468 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 FBF1Q8TES7 1133 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 PNISRQ8TF01 805 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 PMM1Q92871 262 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 ALKBH8Q96BT7 664 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 MKNK1Q9BUB5 465 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 IL21Q9HBE4 155 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 SIRPGQ9P1W8 387 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 SEPT3Q9UH03 358 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 DOLKQ9UPQ8 538 aa6.79□□□□□ -1.32
R3HDM1-216ENST00000483065 M0R2N6 131 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 PER1O15534 1290 aaPredicted RBP6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 PLIN1O60240 522 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 GNA15P30679 374 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 GMPRP36959 345 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 ATP6V1AP38606 617 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 DSC3Q14574 896 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 LONRF3Q496Y0 759 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 CCSAPQ6IQ19 270 aaPredicted RBP6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 MCF2L2Q86YR7 1114 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 TPCN2Q8NHX9 752 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 FAM161BQ96MY7 647 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 PLCD4Q9BRC7 762 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 TCEAL9Q9UHQ7 104 aa6.78□□□□□ -1.32
R3HDM1-216ENST00000483065 FOXO3O43524 673 aa6.77□□□□□ -1.33
R3HDM1-216ENST00000483065 FGRP09769 529 aa6.77□□□□□ -1.33
R3HDM1-216ENST00000483065 WEE1P30291 646 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms