RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 KCNQ3O43525 872 aa19.91■□□□□ 0.78
COL16A1-213ENST00000482910 NLGN1Q8N2Q7 840 aa19.91■□□□□ 0.78
COL16A1-213ENST00000482910 ZBTB1Q9Y2K1 713 aa19.9■□□□□ 0.78
COL16A1-213ENST00000482910 SNRPA1P09661 255 aaKnown RBP19.89■□□□□ 0.77
COL16A1-213ENST00000482910 GYS1P13807 737 aa19.89■□□□□ 0.77
COL16A1-213ENST00000482910 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
COL16A1-213ENST00000482910 USP42Q9H9J4 1324 aaKnown RBP19.89■□□□□ 0.77
COL16A1-213ENST00000482910 BABAM1Q9NWV8 329 aa19.89■□□□□ 0.77
COL16A1-213ENST00000482910 COL15A1P39059 1388 aa19.88■□□□□ 0.77
COL16A1-213ENST00000482910 EIF5P55010 431 aaKnown RBP19.87■□□□□ 0.77
COL16A1-213ENST00000482910 THUMPD2Q9BTF0 503 aaKnown RBP19.87■□□□□ 0.77
COL16A1-213ENST00000482910 CD2APQ9Y5K6 639 aa19.87■□□□□ 0.77
COL16A1-213ENST00000482910 A0A087WZG4 1122 aa19.85■□□□□ 0.77
COL16A1-213ENST00000482910 DCAF8L1A6NGE4 600 aa19.85■□□□□ 0.77
COL16A1-213ENST00000482910 MMP10P09238 476 aa19.85■□□□□ 0.77
COL16A1-213ENST00000482910 IL6STP40189 918 aaPredicted RBP19.85■□□□□ 0.77
COL16A1-213ENST00000482910 CCDC184Q52MB2 194 aa19.85■□□□□ 0.77
COL16A1-213ENST00000482910 NARFQ9UHQ1 456 aa19.85■□□□□ 0.77
COL16A1-213ENST00000482910 LAMB4A4D0S4 1761 aa19.85■□□□□ 0.77
COL16A1-213ENST00000482910 ZPR1O75312 459 aa19.84■□□□□ 0.77
COL16A1-213ENST00000482910 CANXP27824 592 aaKnown RBP19.84■□□□□ 0.77
COL16A1-213ENST00000482910 MIS18AQ9NYP9 233 aa19.84■□□□□ 0.77
COL16A1-213ENST00000482910 TRIM35Q9UPQ4 493 aa19.84■□□□□ 0.77
COL16A1-213ENST00000482910 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
COL16A1-213ENST00000482910 USP16Q9Y5T5 823 aa19.84■□□□□ 0.77
COL16A1-213ENST00000482910 EIF4A1P60842 406 aaKnown RBP19.83■□□□□ 0.77
COL16A1-213ENST00000482910 SRP68Q9UHB9 627 aaKnown RBP19.83■□□□□ 0.77
COL16A1-213ENST00000482910 KIF13BQ9NQT8 1826 aa19.82■□□□□ 0.76
COL16A1-213ENST00000482910 A1BGP04217 495 aa19.82■□□□□ 0.76
COL16A1-213ENST00000482910 NEUROD2Q15784 382 aa19.82■□□□□ 0.76
COL16A1-213ENST00000482910 KLHL34Q8N239 644 aa19.82■□□□□ 0.76
COL16A1-213ENST00000482910 MRS2Q9HD23 443 aa19.82■□□□□ 0.76
COL16A1-213ENST00000482910 TSPYL4Q9UJ04 414 aa19.82■□□□□ 0.76
COL16A1-213ENST00000482910 PRAMEF22A3QJZ6 481 aa19.81■□□□□ 0.76
COL16A1-213ENST00000482910 GIGYF1O75420 1035 aaPredicted RBP19.81■□□□□ 0.76
COL16A1-213ENST00000482910 FKBP8Q14318 412 aa19.81■□□□□ 0.76
COL16A1-213ENST00000482910 USPL1Q5W0Q7 1092 aa19.81■□□□□ 0.76
COL16A1-213ENST00000482910 APAF1O14727 1248 aa19.8■□□□□ 0.76
COL16A1-213ENST00000482910 PARP3Q9Y6F1 533 aa19.8■□□□□ 0.76
COL16A1-213ENST00000482910 SCN7AQ01118 1682 aa19.8■□□□□ 0.76
COL16A1-213ENST00000482910 TM4SF1P30408 202 aa19.79■□□□□ 0.76
COL16A1-213ENST00000482910 NPM2Q86SE8 214 aaKnown RBP19.79■□□□□ 0.76
COL16A1-213ENST00000482910 NLGN2Q8NFZ4 835 aa19.79■□□□□ 0.76
COL16A1-213ENST00000482910 C10orf71Q711Q0 1435 aa19.78■□□□□ 0.76
COL16A1-213ENST00000482910 CHL1O00533 1208 aa19.78■□□□□ 0.76
COL16A1-213ENST00000482910 BCL2L12Q9HB09 334 aa19.78■□□□□ 0.76
COL16A1-213ENST00000482910 RGL2O15211 777 aa19.77■□□□□ 0.76
COL16A1-213ENST00000482910 NCBP3Q53F19 620 aaKnown RBP19.77■□□□□ 0.76
COL16A1-213ENST00000482910 ERBB4Q15303 1308 aa19.76■□□□□ 0.75
COL16A1-213ENST00000482910 BCORQ6W2J9 1755 aa19.76■□□□□ 0.75
COL16A1-213ENST00000482910 CALD1Q05682 793 aaKnown RBP19.76■□□□□ 0.75
COL16A1-213ENST00000482910 DDR1Q08345 913 aa19.76■□□□□ 0.75
COL16A1-213ENST00000482910 NBPF26B4DH59 902 aa19.75■□□□□ 0.75
COL16A1-213ENST00000482910 POLRMTO00411 1230 aaKnown RBP19.75■□□□□ 0.75
COL16A1-213ENST00000482910 NBPF10Q6P3W6 841 aaKnown RBP19.75■□□□□ 0.75
COL16A1-213ENST00000482910 NBPF15Q8N660 670 aa19.75■□□□□ 0.75
COL16A1-213ENST00000482910 CFAP44Q96MT7 982 aa19.75■□□□□ 0.75
COL16A1-213ENST00000482910 NRXN2Q9P2S2 1712 aa19.75■□□□□ 0.75
COL16A1-213ENST00000482910 CAMTA2O94983 1202 aa19.74■□□□□ 0.75
COL16A1-213ENST00000482910 TGFB2P61812 414 aa19.74■□□□□ 0.75
COL16A1-213ENST00000482910 NFIXQ14938 502 aa19.74■□□□□ 0.75
COL16A1-213ENST00000482910 DZIP3Q86Y13 1208 aaKnown RBP19.74■□□□□ 0.75
COL16A1-213ENST00000482910 TBC1D2BQ9UPU7 963 aa19.74■□□□□ 0.75
COL16A1-213ENST00000482910 ZNF330Q9Y3S2 320 aaPredicted RBP19.74■□□□□ 0.75
COL16A1-213ENST00000482910 CCDC27Q2M243 656 aa19.73■□□□□ 0.75
COL16A1-213ENST00000482910 CLEC4GQ6UXB4 293 aa19.73■□□□□ 0.75
COL16A1-213ENST00000482910 AFDNP55196 1824 aaKnown RBP19.73■□□□□ 0.75
COL16A1-213ENST00000482910 KIAA1551Q9HCM1 1747 aa19.73■□□□□ 0.75
COL16A1-213ENST00000482910 ZNF853P0CG23 659 aa19.72■□□□□ 0.75
COL16A1-213ENST00000482910 GPR162Q16538 588 aa19.72■□□□□ 0.75
COL16A1-213ENST00000482910 IFT57Q9NWB7 429 aa19.72■□□□□ 0.75
COL16A1-213ENST00000482910 PXDNLA1KZ92 1463 aa19.72■□□□□ 0.75
COL16A1-213ENST00000482910 HOXB7P09629 217 aa19.71■□□□□ 0.75
COL16A1-213ENST00000482910 PIP4K2AP48426 406 aaPredicted RBP19.71■□□□□ 0.75
COL16A1-213ENST00000482910 GNAI1P63096 354 aa19.7■□□□□ 0.74
COL16A1-213ENST00000482910 ZNF652Q9Y2D9 606 aa19.7■□□□□ 0.74
COL16A1-213ENST00000482910 LAS1LQ9Y4W2 734 aaKnown RBP19.7■□□□□ 0.74
COL16A1-213ENST00000482910 CHD4Q14839 1912 aa19.7■□□□□ 0.74
COL16A1-213ENST00000482910 GRIN3BO60391 1043 aa19.69■□□□□ 0.74
COL16A1-213ENST00000482910 SERPINB2P05120 415 aa19.69■□□□□ 0.74
COL16A1-213ENST00000482910 TBC1D9BQ66K14 1250 aa19.69■□□□□ 0.74
COL16A1-213ENST00000482910 CARMIL3Q8ND23 1372 aa19.69■□□□□ 0.74
COL16A1-213ENST00000482910 N4BP2Q86UW6 1770 aaPredicted RBP19.68■□□□□ 0.74
COL16A1-213ENST00000482910 MBIPQ9NS73 344 aa19.68■□□□□ 0.74
COL16A1-213ENST00000482910 BRCA1P38398 1863 aaKnown RBP19.67■□□□□ 0.74
COL16A1-213ENST00000482910 ERVV-1B6SEH8 477 aa19.67■□□□□ 0.74
COL16A1-213ENST00000482910 NGEFQ8N5V2 710 aa19.67■□□□□ 0.74
COL16A1-213ENST00000482910 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
COL16A1-213ENST00000482910 YBX3P16989 372 aaKnown RBP eCLIP19.66■□□□□ 0.74
COL16A1-213ENST00000482910 WWC1Q8IX03 1113 aa19.66■□□□□ 0.74
COL16A1-213ENST00000482910 EIF2S2P20042 333 aaKnown RBP19.65■□□□□ 0.74
COL16A1-213ENST00000482910 PDIA6Q15084 440 aa19.65■□□□□ 0.74
COL16A1-213ENST00000482910 BICDL1Q6ZP65 573 aa19.65■□□□□ 0.74
COL16A1-213ENST00000482910 LRP10Q7Z4F1 713 aa19.65■□□□□ 0.74
COL16A1-213ENST00000482910 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
COL16A1-213ENST00000482910 IL16Q14005 1332 aa19.65■□□□□ 0.74
COL16A1-213ENST00000482910 MAP3K15Q6ZN16 1313 aa19.65■□□□□ 0.74
COL16A1-213ENST00000482910 DPEP1P16444 411 aa19.64■□□□□ 0.73
COL16A1-213ENST00000482910 KRT24Q2M2I5 525 aa19.64■□□□□ 0.73
COL16A1-213ENST00000482910 KIF6Q6ZMV9 814 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms