RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 ZNF496Q96IT1 587 aaPredicted RBP13.26□□□□□ -0.29
HLA-DQA1-206ENST00000482745 GYS1P13807 737 aa13.25□□□□□ -0.29
HLA-DQA1-206ENST00000482745 PRKCSHP14314 528 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQA1-206ENST00000482745 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
HLA-DQA1-206ENST00000482745 SRP68Q9UHB9 627 aaKnown RBP13.25□□□□□ -0.29
HLA-DQA1-206ENST00000482745 ZBTB1Q9Y2K1 713 aa13.25□□□□□ -0.29
HLA-DQA1-206ENST00000482745 CD2APQ9Y5K6 639 aa13.25□□□□□ -0.29
HLA-DQA1-206ENST00000482745 MAPK8IP3Q9UPT6 1336 aa13.25□□□□□ -0.29
HLA-DQA1-206ENST00000482745 HEG1Q9ULI3 1381 aa13.25□□□□□ -0.29
HLA-DQA1-206ENST00000482745 SOS1Q07889 1333 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQA1-206ENST00000482745 USP42Q9H9J4 1324 aaKnown RBP13.24□□□□□ -0.29
HLA-DQA1-206ENST00000482745 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
HLA-DQA1-206ENST00000482745 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
HLA-DQA1-206ENST00000482745 CHD4Q14839 1912 aa13.24□□□□□ -0.29
HLA-DQA1-206ENST00000482745 KCNQ3O43525 872 aa13.24□□□□□ -0.29
HLA-DQA1-206ENST00000482745 ERICH6Q7L0X2 663 aa13.24□□□□□ -0.29
HLA-DQA1-206ENST00000482745 PLEKHF1Q96S99 279 aa13.24□□□□□ -0.29
HLA-DQA1-206ENST00000482745 COL15A1P39059 1388 aa13.24□□□□□ -0.29
HLA-DQA1-206ENST00000482745 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
HLA-DQA1-206ENST00000482745 STARD3NLO95772 234 aa13.23□□□□□ -0.29
HLA-DQA1-206ENST00000482745 CANXP27824 592 aaKnown RBP13.23□□□□□ -0.29
HLA-DQA1-206ENST00000482745 PNNQ9H307 717 aaKnown RBP13.23□□□□□ -0.29
HLA-DQA1-206ENST00000482745 PARP3Q9Y6F1 533 aa13.22□□□□□ -0.29
HLA-DQA1-206ENST00000482745 ZPR1O75312 459 aa13.22□□□□□ -0.29
HLA-DQA1-206ENST00000482745 NFE2L2Q16236 605 aa13.22□□□□□ -0.29
HLA-DQA1-206ENST00000482745 WWC3Q9ULE0 1092 aa13.22□□□□□ -0.29
HLA-DQA1-206ENST00000482745 KIF13BQ9NQT8 1826 aa13.21□□□□□ -0.29
HLA-DQA1-206ENST00000482745 USPL1Q5W0Q7 1092 aa13.21□□□□□ -0.29
HLA-DQA1-206ENST00000482745 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQA1-206ENST00000482745 ZNF330Q9Y3S2 320 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQA1-206ENST00000482745 YBX3P16989 372 aaKnown RBP eCLIP13.21□□□□□ -0.3
HLA-DQA1-206ENST00000482745 PRKRIP1Q9H875 184 aaPredicted RBP13.21□□□□□ -0.3
HLA-DQA1-206ENST00000482745 N4BP2Q86UW6 1770 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQA1-206ENST00000482745 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
HLA-DQA1-206ENST00000482745 TAF7Q15545 349 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQA1-206ENST00000482745 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
HLA-DQA1-206ENST00000482745 KDM3BQ7LBC6 1761 aa13.19□□□□□ -0.3
HLA-DQA1-206ENST00000482745 KIAA1551Q9HCM1 1747 aa13.19□□□□□ -0.3
HLA-DQA1-206ENST00000482745 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.3
HLA-DQA1-206ENST00000482745 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
HLA-DQA1-206ENST00000482745 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
HLA-DQA1-206ENST00000482745 PXDNLA1KZ92 1463 aa13.18□□□□□ -0.3
HLA-DQA1-206ENST00000482745 PRAMEF22A3QJZ6 481 aa13.18□□□□□ -0.3
HLA-DQA1-206ENST00000482745 A1BGP04217 495 aa13.18□□□□□ -0.3
HLA-DQA1-206ENST00000482745 DDR1Q08345 913 aa13.18□□□□□ -0.3
HLA-DQA1-206ENST00000482745 CCDC146Q8IYE0 955 aa13.18□□□□□ -0.3
HLA-DQA1-206ENST00000482745 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
HLA-DQA1-206ENST00000482745 EIF5P55010 431 aaKnown RBP13.18□□□□□ -0.3
HLA-DQA1-206ENST00000482745 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
HLA-DQA1-206ENST00000482745 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
HLA-DQA1-206ENST00000482745 GRIN3BO60391 1043 aa13.17□□□□□ -0.3
HLA-DQA1-206ENST00000482745 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
HLA-DQA1-206ENST00000482745 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
HLA-DQA1-206ENST00000482745 AFDNP55196 1824 aaKnown RBP13.17□□□□□ -0.3
HLA-DQA1-206ENST00000482745 A0A087WZG4 1122 aa13.16□□□□□ -0.3
HLA-DQA1-206ENST00000482745 PIP4K2AP48426 406 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQA1-206ENST00000482745 RIPK4P57078 832 aa13.16□□□□□ -0.3
HLA-DQA1-206ENST00000482745 POLRMTO00411 1230 aaKnown RBP13.16□□□□□ -0.3
HLA-DQA1-206ENST00000482745 IL6STP40189 918 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQA1-206ENST00000482745 PNISRQ8TF01 805 aaKnown RBP13.16□□□□□ -0.3
HLA-DQA1-206ENST00000482745 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
HLA-DQA1-206ENST00000482745 RRP7AQ9Y3A4 280 aaKnown RBP13.16□□□□□ -0.3
HLA-DQA1-206ENST00000482745 A0A0G2JLW4 131 aa13.15□□□□□ -0.3
HLA-DQA1-206ENST00000482745 TM4SF1P30408 202 aa13.15□□□□□ -0.3
HLA-DQA1-206ENST00000482745 TMPOP42166 694 aaKnown RBP13.15□□□□□ -0.3
HLA-DQA1-206ENST00000482745 TGFB2P61812 414 aa13.15□□□□□ -0.3
HLA-DQA1-206ENST00000482745 NFIXQ14938 502 aa13.15□□□□□ -0.3
HLA-DQA1-206ENST00000482745 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
HLA-DQA1-206ENST00000482745 TBC1D2BQ9UPU7 963 aa13.15□□□□□ -0.3
HLA-DQA1-206ENST00000482745 BCORQ6W2J9 1755 aa13.15□□□□□ -0.3
HLA-DQA1-206ENST00000482745 BICDL1Q6ZP65 573 aa13.15□□□□□ -0.3
HLA-DQA1-206ENST00000482745 BRCA1P38398 1863 aaKnown RBP13.14□□□□□ -0.31
HLA-DQA1-206ENST00000482745 DPEP1P16444 411 aa13.14□□□□□ -0.31
HLA-DQA1-206ENST00000482745 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
HLA-DQA1-206ENST00000482745 ADAMTS8Q9UP79 889 aa13.14□□□□□ -0.31
HLA-DQA1-206ENST00000482745 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
HLA-DQA1-206ENST00000482745 ERICH6BQ5W0A0 696 aa13.13□□□□□ -0.31
HLA-DQA1-206ENST00000482745 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
HLA-DQA1-206ENST00000482745 ANP32CO43423 234 aa13.13□□□□□ -0.31
HLA-DQA1-206ENST00000482745 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
HLA-DQA1-206ENST00000482745 TSPYL4Q9UJ04 414 aa13.13□□□□□ -0.31
HLA-DQA1-206ENST00000482745 BCS1LQ9Y276 419 aa13.13□□□□□ -0.31
HLA-DQA1-206ENST00000482745 ZNF784Q8NCA9 323 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQA1-206ENST00000482745 SERPINB2P05120 415 aa13.12□□□□□ -0.31
HLA-DQA1-206ENST00000482745 EIF4A1P60842 406 aaKnown RBP13.12□□□□□ -0.31
HLA-DQA1-206ENST00000482745 TBC1D9BQ66K14 1250 aa13.12□□□□□ -0.31
HLA-DQA1-206ENST00000482745 CAMTA2O94983 1202 aa13.11□□□□□ -0.31
HLA-DQA1-206ENST00000482745 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
HLA-DQA1-206ENST00000482745 GIGYF1O75420 1035 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQA1-206ENST00000482745 CHRNA5P30532 468 aa13.1□□□□□ -0.31
HLA-DQA1-206ENST00000482745 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
HLA-DQA1-206ENST00000482745 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
HLA-DQA1-206ENST00000482745 CARMIL3Q8ND23 1372 aa13.1□□□□□ -0.31
HLA-DQA1-206ENST00000482745 ARFGEF1Q9Y6D6 1849 aa13.1□□□□□ -0.31
HLA-DQA1-206ENST00000482745 DEKP35659 375 aaKnown RBP13.09□□□□□ -0.31
HLA-DQA1-206ENST00000482745 PIM2Q9P1W9 311 aa13.09□□□□□ -0.31
HLA-DQA1-206ENST00000482745 NPHP1O15259 732 aa13.09□□□□□ -0.31
HLA-DQA1-206ENST00000482745 KCNA3P22001 575 aa13.09□□□□□ -0.31
HLA-DQA1-206ENST00000482745 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
HLA-DQA1-206ENST00000482745 SETDB2Q96T68 719 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms