RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 USP3Q9Y6I4 520 aa7.63□□□□□ -1.19
GTF3A-207ENST00000482655 IGF1RP08069 1367 aa7.62□□□□□ -1.19
GTF3A-207ENST00000482655 ZBTB7BO15156 539 aaPredicted RBP7.62□□□□□ -1.19
GTF3A-207ENST00000482655 ATP4AP20648 1035 aa7.62□□□□□ -1.19
GTF3A-207ENST00000482655 LMOD1P29536 600 aaPredicted RBP7.62□□□□□ -1.19
GTF3A-207ENST00000482655 ZNF385CQ66K41 422 aaPredicted RBP7.62□□□□□ -1.19
GTF3A-207ENST00000482655 CFHR5Q9BXR6 569 aa7.62□□□□□ -1.19
GTF3A-207ENST00000482655 PARP3Q9Y6F1 533 aa7.62□□□□□ -1.19
GTF3A-207ENST00000482655 GJA3Q9Y6H8 435 aa7.62□□□□□ -1.19
GTF3A-207ENST00000482655 THBS1P07996 1170 aa7.61□□□□□ -1.19
GTF3A-207ENST00000482655 EPHA4P54764 986 aa7.61□□□□□ -1.19
GTF3A-207ENST00000482655 TBCELQ5QJ74 424 aa7.61□□□□□ -1.19
GTF3A-207ENST00000482655 BICDL1Q6ZP65 573 aa7.61□□□□□ -1.19
GTF3A-207ENST00000482655 ZNF295-AS1Q8N0V1 137 aa7.61□□□□□ -1.19
GTF3A-207ENST00000482655 ATXN7L1Q9ULK2 861 aaPredicted RBP7.61□□□□□ -1.19
GTF3A-207ENST00000482655 SFI1A8K8P3 1242 aa7.6□□□□□ -1.19
GTF3A-207ENST00000482655 M0R2N6 131 aa7.6□□□□□ -1.19
GTF3A-207ENST00000482655 SEC13P55735 322 aa7.6□□□□□ -1.19
GTF3A-207ENST00000482655 FOXK2Q01167 660 aa7.6□□□□□ -1.19
GTF3A-207ENST00000482655 NLRP8Q86W28 1048 aa7.6□□□□□ -1.19
GTF3A-207ENST00000482655 L3MBTL2Q969R5 705 aa7.6□□□□□ -1.19
GTF3A-207ENST00000482655 VRTNQ9H8Y1 702 aa7.6□□□□□ -1.19
GTF3A-207ENST00000482655 A0A1W2PNR3 127 aa7.59□□□□□ -1.19
GTF3A-207ENST00000482655 SERTM1A2A2V5 107 aa7.59□□□□□ -1.19
GTF3A-207ENST00000482655 NOS2P35228 1153 aa7.59□□□□□ -1.19
GTF3A-207ENST00000482655 MAP2K3P46734 347 aa7.59□□□□□ -1.19
GTF3A-207ENST00000482655 PSMA6P60900 246 aaKnown RBP7.59□□□□□ -1.19
GTF3A-207ENST00000482655 TEAD4Q15561 434 aa7.59□□□□□ -1.19
GTF3A-207ENST00000482655 TSEN2Q8NCE0 465 aaKnown RBP7.59□□□□□ -1.19
GTF3A-207ENST00000482655 WHAMMQ8TF30 809 aa7.59□□□□□ -1.19
GTF3A-207ENST00000482655 ABHD17AQ96GS6 310 aa7.59□□□□□ -1.19
GTF3A-207ENST00000482655 TSPAN10Q9H1Z9 355 aaPredicted RBP7.59□□□□□ -1.19
GTF3A-207ENST00000482655 ENAMQ9NRM1 1142 aa7.59□□□□□ -1.19
GTF3A-207ENST00000482655 GTF3C3Q9Y5Q9 886 aa7.59□□□□□ -1.19
GTF3A-207ENST00000482655 FGFR3P22607 806 aa7.58□□□□□ -1.2
GTF3A-207ENST00000482655 ZDHHC1Q8WTX9 485 aa7.58□□□□□ -1.2
GTF3A-207ENST00000482655 ZCCHC2Q9C0B9 1178 aaKnown RBP7.58□□□□□ -1.2
GTF3A-207ENST00000482655 ZMYND15Q9H091 742 aa7.58□□□□□ -1.2
GTF3A-207ENST00000482655 NEUROD4Q9HD90 331 aa7.58□□□□□ -1.2
GTF3A-207ENST00000482655 PCDHGC4Q9Y5F7 938 aa7.58□□□□□ -1.2
GTF3A-207ENST00000482655 FAM196BA6NMK8 535 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L15C9J2P7 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L10C9JJH3 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L13C9JLJ4 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L12C9JPN9 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L11C9JVI0 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L21D6R901 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L18D6R9N7 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L22D6RA61 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L17D6RBQ6 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L19D6RCP7 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L20D6RJB6 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 ATXN7O15265 892 aaPredicted RBP7.57□□□□□ -1.2
GTF3A-207ENST00000482655 CELA2BP08218 269 aaPredicted RBP7.57□□□□□ -1.2
GTF3A-207ENST00000482655 BMP4P12644 408 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 TXLNAP40222 546 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 USP17L24Q0WX57 530 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 UBAP2LQ14157 1087 aaKnown RBP7.57□□□□□ -1.2
GTF3A-207ENST00000482655 CRTC2Q53ET0 693 aaPredicted RBP7.57□□□□□ -1.2
GTF3A-207ENST00000482655 KANK4Q5T7N3 995 aaPredicted RBP7.57□□□□□ -1.2
GTF3A-207ENST00000482655 LYPD4Q6UWN0 246 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 ADAMTS8Q9UP79 889 aa7.57□□□□□ -1.2
GTF3A-207ENST00000482655 RNF225M0QZC1 329 aaPredicted RBP7.56□□□□□ -1.2
GTF3A-207ENST00000482655 PPP1R12BO60237 982 aaPredicted RBP7.56□□□□□ -1.2
GTF3A-207ENST00000482655 BNIP3LO60238 219 aa7.56□□□□□ -1.2
GTF3A-207ENST00000482655 MARSP56192 900 aaKnown RBP7.56□□□□□ -1.2
GTF3A-207ENST00000482655 DPYDQ12882 1025 aa7.56□□□□□ -1.2
GTF3A-207ENST00000482655 PTK7Q13308 1070 aa7.56□□□□□ -1.2
GTF3A-207ENST00000482655 ZIC5Q96T25 663 aa7.56□□□□□ -1.2
GTF3A-207ENST00000482655 HINFPQ9BQA5 517 aa7.56□□□□□ -1.2
GTF3A-207ENST00000482655 OXCT2Q9BYC2 517 aaPredicted RBP7.56□□□□□ -1.2
GTF3A-207ENST00000482655 GPC6Q9Y625 555 aaPredicted RBP7.56□□□□□ -1.2
GTF3A-207ENST00000482655 DCDC2BA2VCK2 349 aa7.55□□□□□ -1.2
GTF3A-207ENST00000482655 DKK1O94907 266 aa7.55□□□□□ -1.2
GTF3A-207ENST00000482655 BCRP11274 1271 aa7.55□□□□□ -1.2
GTF3A-207ENST00000482655 RFX1P22670 979 aa7.55□□□□□ -1.2
GTF3A-207ENST00000482655 CFAP70Q5T0N1 1121 aa7.55□□□□□ -1.2
GTF3A-207ENST00000482655 ANKMY2Q8IV38 441 aa7.55□□□□□ -1.2
GTF3A-207ENST00000482655 RHPN1Q8TCX5 695 aa7.55□□□□□ -1.2
GTF3A-207ENST00000482655 ACDQ96AP0 544 aa7.55□□□□□ -1.2
GTF3A-207ENST00000482655 NDFIP2Q9NV92 336 aa7.55□□□□□ -1.2
GTF3A-207ENST00000482655 EML1O00423 815 aa7.54□□□□□ -1.2
GTF3A-207ENST00000482655 KHNYNO15037 678 aaKnown RBP7.54□□□□□ -1.2
GTF3A-207ENST00000482655 ARHGEF15O94989 841 aa7.54□□□□□ -1.2
GTF3A-207ENST00000482655 NEDD1Q8NHV4 660 aa7.54□□□□□ -1.2
GTF3A-207ENST00000482655 CHMP7Q8WUX9 453 aaPredicted RBP7.54□□□□□ -1.2
GTF3A-207ENST00000482655 SCG3Q8WXD2 468 aaKnown RBP7.54□□□□□ -1.2
GTF3A-207ENST00000482655 GDF2Q9UK05 429 aaPredicted RBP7.54□□□□□ -1.2
GTF3A-207ENST00000482655 FAM157BP0CG42 384 aa7.53□□□□□ -1.2
GTF3A-207ENST00000482655 MAPTP10636 758 aaKnown RBP7.53□□□□□ -1.2
GTF3A-207ENST00000482655 HIRAP54198 1017 aaPredicted RBP7.53□□□□□ -1.2
GTF3A-207ENST00000482655 SH3PXD2AQ5TCZ1 1133 aa7.53□□□□□ -1.2
GTF3A-207ENST00000482655 LRRC69Q6ZNQ3 347 aa7.53□□□□□ -1.2
GTF3A-207ENST00000482655 GAS2L2Q8NHY3 880 aa7.53□□□□□ -1.2
GTF3A-207ENST00000482655 KLRG1Q96E93 195 aa7.53□□□□□ -1.2
GTF3A-207ENST00000482655 LRRC4BQ9NT99 713 aa7.53□□□□□ -1.2
GTF3A-207ENST00000482655 HCN4Q9Y3Q4 1203 aa7.53□□□□□ -1.2
GTF3A-207ENST00000482655 ATAD2Q6PL18 1390 aa7.52□□□□□ -1.21
GTF3A-207ENST00000482655 TNP2Q05952 138 aa7.52□□□□□ -1.21
GTF3A-207ENST00000482655 SAMD5Q5TGI4 173 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms