RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 FERMT3Q86UX7 667 aa11.01□□□□□ -0.65
CALD1-220ENST00000482470 ARHGEF40Q8TER5 1519 aa11□□□□□ -0.65
CALD1-220ENST00000482470 PKP1Q13835 747 aa11□□□□□ -0.65
CALD1-220ENST00000482470 CCDC83Q8IWF9 413 aa11□□□□□ -0.65
CALD1-220ENST00000482470 FAM184AQ8NB25 1140 aa11□□□□□ -0.65
CALD1-220ENST00000482470 PRDM11Q9NQV5 511 aa11□□□□□ -0.65
CALD1-220ENST00000482470 CAMSAP1Q5T5Y3 1602 aa11□□□□□ -0.65
CALD1-220ENST00000482470 GLRX3O76003 335 aaKnown RBP11□□□□□ -0.65
CALD1-220ENST00000482470 CPA1P15085 419 aa11□□□□□ -0.65
CALD1-220ENST00000482470 IP6K1Q92551 441 aa11□□□□□ -0.65
CALD1-220ENST00000482470 FAM177BA6PVY3 158 aa11□□□□□ -0.65
CALD1-220ENST00000482470 RAB11FIP3O75154 756 aa11□□□□□ -0.65
CALD1-220ENST00000482470 BRPF1P55201 1214 aaPredicted RBP11□□□□□ -0.65
CALD1-220ENST00000482470 RBM10P98175 930 aaKnown RBP11□□□□□ -0.65
CALD1-220ENST00000482470 RNF20Q5VTR2 975 aa11□□□□□ -0.65
CALD1-220ENST00000482470 USP44Q9H0E7 712 aa11□□□□□ -0.65
CALD1-220ENST00000482470 DEPDC5O75140 1603 aa11□□□□□ -0.65
CALD1-220ENST00000482470 NFATC2IPQ8NCF5 419 aa10.99□□□□□ -0.65
CALD1-220ENST00000482470 ATP6V1DQ9Y5K8 247 aa10.99□□□□□ -0.65
CALD1-220ENST00000482470 CHMLP26374 656 aa10.99□□□□□ -0.65
CALD1-220ENST00000482470 KLHDC4Q8TBB5 520 aa10.99□□□□□ -0.65
CALD1-220ENST00000482470 CYP46A1Q9Y6A2 500 aa10.99□□□□□ -0.65
CALD1-220ENST00000482470 LRRC7Q96NW7 1537 aa10.99□□□□□ -0.65
CALD1-220ENST00000482470 IQSEC2Q5JU85 1478 aa10.99□□□□□ -0.65
CALD1-220ENST00000482470 USP6P35125 1406 aa10.99□□□□□ -0.65
CALD1-220ENST00000482470 HTATSF1O43719 755 aaKnown RBP10.99□□□□□ -0.65
CALD1-220ENST00000482470 ERC1Q8IUD2 1116 aa10.99□□□□□ -0.65
CALD1-220ENST00000482470 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.99□□□□□ -0.65
CALD1-220ENST00000482470 ESPNB1AK53 854 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 PPFIA3O75145 1194 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 KDM4AO75164 1064 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 COPS6Q7L5N1 327 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 PDRG1Q9NUG6 133 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 PIK3C2BO00750 1634 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 PHF14O94880 888 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 CEBPZQ03701 1054 aaKnown RBP10.98□□□□□ -0.65
CALD1-220ENST00000482470 AKAP4Q5JQC9 854 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 UBE3BQ7Z3V4 1068 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 KIAA2012Q0VF49 1180 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 ECHDC1Q9NTX5 307 aa10.98□□□□□ -0.65
CALD1-220ENST00000482470 UNC5CLQ8IV45 518 aa10.97□□□□□ -0.65
CALD1-220ENST00000482470 XAGE3Q8WTP9 111 aa10.97□□□□□ -0.65
CALD1-220ENST00000482470 TOMM22Q9NS69 142 aa10.97□□□□□ -0.65
CALD1-220ENST00000482470 KIAA1210Q9ULL0 1709 aa10.97□□□□□ -0.65
CALD1-220ENST00000482470 WASHC4Q2M389 1173 aa10.97□□□□□ -0.65
CALD1-220ENST00000482470 KIAA0232Q92628 1395 aa10.97□□□□□ -0.65
CALD1-220ENST00000482470 NPHP1O15259 732 aa10.97□□□□□ -0.65
CALD1-220ENST00000482470 LARP1Q6PKG0 1096 aaKnown RBP10.97□□□□□ -0.65
CALD1-220ENST00000482470 PALD1Q9ULE6 856 aa10.97□□□□□ -0.65
CALD1-220ENST00000482470 SOS1Q07889 1333 aaPredicted RBP10.97□□□□□ -0.65
CALD1-220ENST00000482470 WDR33Q9C0J8 1336 aaKnown RBP10.97□□□□□ -0.65
CALD1-220ENST00000482470 A0A087WZG4 1122 aa10.96□□□□□ -0.65
CALD1-220ENST00000482470 PRAMEF22A3QJZ6 481 aa10.96□□□□□ -0.65
CALD1-220ENST00000482470 MBD3O95983 291 aa10.96□□□□□ -0.65
CALD1-220ENST00000482470 BICD2Q8TD16 824 aa10.96□□□□□ -0.65
CALD1-220ENST00000482470 MYOM1P52179 1685 aa10.96□□□□□ -0.65
CALD1-220ENST00000482470 RNMTO43148 476 aaKnown RBP10.96□□□□□ -0.65
CALD1-220ENST00000482470 APPP05067 770 aa10.96□□□□□ -0.65
CALD1-220ENST00000482470 ZBTB3Q9H5J0 574 aa10.96□□□□□ -0.65
CALD1-220ENST00000482470 HYPKQ9NX55 129 aa10.96□□□□□ -0.65
CALD1-220ENST00000482470 EIF4A1P60842 406 aaKnown RBP10.96□□□□□ -0.66
CALD1-220ENST00000482470 GNL2Q13823 731 aaKnown RBP10.96□□□□□ -0.66
CALD1-220ENST00000482470 LARP1BQ659C4 914 aaKnown RBP10.96□□□□□ -0.66
CALD1-220ENST00000482470 NECAB1Q8N987 351 aa10.96□□□□□ -0.66
CALD1-220ENST00000482470 CDK12Q9NYV4 1490 aaPredicted RBP10.95□□□□□ -0.66
CALD1-220ENST00000482470 CSPP1Q1MSJ5 1256 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 KLHL40Q2TBA0 621 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 BLOC1S2Q6QNY1 142 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 KSR2Q6VAB6 950 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 CPS1P31327 1500 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 IGSF1Q8N6C5 1336 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 FKBP4Q02790 459 aaKnown RBP eCLIP10.95□□□□□ -0.66
CALD1-220ENST00000482470 PDE4CQ08493 712 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 DDX11Q96FC9 970 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 KAT6BQ8WYB5 2073 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 SETD1BQ9UPS6 1966 aaKnown RBP10.95□□□□□ -0.66
CALD1-220ENST00000482470 GRM8O00222 908 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 CPSF1Q10570 1443 aaKnown RBP10.95□□□□□ -0.66
CALD1-220ENST00000482470 CD163L1Q9NR16 1453 aa10.95□□□□□ -0.66
CALD1-220ENST00000482470 PSMA5P28066 241 aa10.94□□□□□ -0.66
CALD1-220ENST00000482470 PROSER3Q2NL68 480 aa10.94□□□□□ -0.66
CALD1-220ENST00000482470 ARHGEF10O15013 1369 aa10.94□□□□□ -0.66
CALD1-220ENST00000482470 PLEKHG1Q9ULL1 1385 aa10.94□□□□□ -0.66
CALD1-220ENST00000482470 ANKRD13DQ6ZTN6 518 aa10.94□□□□□ -0.66
CALD1-220ENST00000482470 NDUFB9Q9Y6M9 179 aa10.94□□□□□ -0.66
CALD1-220ENST00000482470 HSPA2P54652 639 aa10.94□□□□□ -0.66
CALD1-220ENST00000482470 CCDC173Q0VFZ6 552 aa10.94□□□□□ -0.66
CALD1-220ENST00000482470 ZSCAN23Q3MJ62 389 aa10.94□□□□□ -0.66
CALD1-220ENST00000482470 TSPY26PQ9H489 355 aa10.94□□□□□ -0.66
CALD1-220ENST00000482470 PTCH1Q13635 1447 aa10.93□□□□□ -0.66
CALD1-220ENST00000482470 SF3A1Q15459 793 aaKnown RBP10.93□□□□□ -0.66
CALD1-220ENST00000482470 RRAGDQ9NQL2 400 aaPredicted RBP10.93□□□□□ -0.66
CALD1-220ENST00000482470 LIMCH1Q9UPQ0 1083 aa10.93□□□□□ -0.66
CALD1-220ENST00000482470 GAS2L3Q86XJ1 694 aa10.93□□□□□ -0.66
CALD1-220ENST00000482470 BICC1Q9H694 974 aaKnown RBP10.93□□□□□ -0.66
CALD1-220ENST00000482470 R3HCC1Q9Y3T6 440 aaKnown RBP10.93□□□□□ -0.66
CALD1-220ENST00000482470 PRIM1P49642 420 aaKnown RBP10.93□□□□□ -0.66
CALD1-220ENST00000482470 IFNL2Q8IZJ0 200 aa10.93□□□□□ -0.66
CALD1-220ENST00000482470 PPLO60437 1756 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms