RNA–Protein interactions for RNA: ENST00000482338.5

ERGIC3-214, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-214ENST00000482338 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
ERGIC3-214ENST00000482338 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
ERGIC3-214ENST00000482338 FTSJ3Q8IY81 847 aaKnown RBP11.24□□□□□ -0.61
ERGIC3-214ENST00000482338 ARHGAP45Q92619 1136 aa11.24□□□□□ -0.61
ERGIC3-214ENST00000482338 SYTL4Q96C24 671 aaPredicted RBP11.24□□□□□ -0.61
ERGIC3-214ENST00000482338 ATG3Q9NT62 314 aa11.24□□□□□ -0.61
ERGIC3-214ENST00000482338 CHPF2Q9P2E5 772 aa11.24□□□□□ -0.61
ERGIC3-214ENST00000482338 ASAP1Q9ULH1 1129 aa11.24□□□□□ -0.61
ERGIC3-214ENST00000482338 ABCC4O15439 1325 aa11.24□□□□□ -0.61
ERGIC3-214ENST00000482338 NUP98P52948 1817 aa11.23□□□□□ -0.61
ERGIC3-214ENST00000482338 SNRPA1P09661 255 aaKnown RBP11.23□□□□□ -0.61
ERGIC3-214ENST00000482338 MS4A1P11836 297 aa11.23□□□□□ -0.61
ERGIC3-214ENST00000482338 ZNF772Q68DY9 489 aaPredicted RBP11.23□□□□□ -0.61
ERGIC3-214ENST00000482338 SEPT12Q8IYM1 358 aa11.23□□□□□ -0.61
ERGIC3-214ENST00000482338 TMEM57Q8N5G2 664 aa11.23□□□□□ -0.61
ERGIC3-214ENST00000482338 PPP4R2Q9NY27 417 aa11.23□□□□□ -0.61
ERGIC3-214ENST00000482338 PTPRCP08575 1304 aa11.23□□□□□ -0.61
ERGIC3-214ENST00000482338 PXDNLA1KZ92 1463 aa11.23□□□□□ -0.61
ERGIC3-214ENST00000482338 TNS1Q9HBL0 1735 aaKnown RBP11.23□□□□□ -0.61
ERGIC3-214ENST00000482338 PTCD1O75127 700 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-214ENST00000482338 ANXA1P04083 346 aa11.22□□□□□ -0.61
ERGIC3-214ENST00000482338 FLIIQ13045 1269 aa11.22□□□□□ -0.61
ERGIC3-214ENST00000482338 MVPQ14764 893 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-214ENST00000482338 BCORQ6W2J9 1755 aa11.22□□□□□ -0.61
ERGIC3-214ENST00000482338 API5Q9BZZ5 524 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-214ENST00000482338 PHAXQ9H814 394 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-214ENST00000482338 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
ERGIC3-214ENST00000482338 KCNQ2O43526 872 aa11.21□□□□□ -0.61
ERGIC3-214ENST00000482338 PROSER3Q2NL68 480 aa11.21□□□□□ -0.61
ERGIC3-214ENST00000482338 FAM182BQ5T319 152 aa11.21□□□□□ -0.61
ERGIC3-214ENST00000482338 CHMP4AQ9BY43 222 aa11.21□□□□□ -0.61
ERGIC3-214ENST00000482338 DBF4Q9UBU7 674 aaPredicted RBP11.21□□□□□ -0.61
ERGIC3-214ENST00000482338 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-214ENST00000482338 PDIA6Q15084 440 aa11.2□□□□□ -0.62
ERGIC3-214ENST00000482338 B4GALNT3Q6L9W6 998 aa11.2□□□□□ -0.62
ERGIC3-214ENST00000482338 ITPRIPQ8IWB1 547 aa11.2□□□□□ -0.62
ERGIC3-214ENST00000482338 DDX21Q9NR30 783 aaKnown RBP eCLIP11.2□□□□□ -0.62
ERGIC3-214ENST00000482338 CASZ1Q86V15 1759 aa11.2□□□□□ -0.62
ERGIC3-214ENST00000482338 PALLDQ8WX93 1383 aa11.19□□□□□ -0.62
ERGIC3-214ENST00000482338 C4AP0C0L4 1744 aa11.19□□□□□ -0.62
ERGIC3-214ENST00000482338 C4BP0C0L5 1744 aa11.19□□□□□ -0.62
ERGIC3-214ENST00000482338 F6X3S4 739 aa11.19□□□□□ -0.62
ERGIC3-214ENST00000482338 FKBP5Q13451 457 aaPredicted RBP11.19□□□□□ -0.62
ERGIC3-214ENST00000482338 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
ERGIC3-214ENST00000482338 SLC4A9Q96Q91 983 aa11.19□□□□□ -0.62
ERGIC3-214ENST00000482338 RBM42Q9BTD8 480 aaKnown RBP11.19□□□□□ -0.62
ERGIC3-214ENST00000482338 RGS17Q9UGC6 210 aaPredicted RBP11.19□□□□□ -0.62
ERGIC3-214ENST00000482338 ADCY9O60503 1353 aa11.18□□□□□ -0.62
ERGIC3-214ENST00000482338 ERBB4Q15303 1308 aa11.18□□□□□ -0.62
ERGIC3-214ENST00000482338 PIP4K2AP48426 406 aaPredicted RBP11.18□□□□□ -0.62
ERGIC3-214ENST00000482338 INTS3Q68E01 1043 aaKnown RBP11.18□□□□□ -0.62
ERGIC3-214ENST00000482338 PTF1AQ7RTS3 328 aa11.18□□□□□ -0.62
ERGIC3-214ENST00000482338 LRP10Q7Z4F1 713 aa11.18□□□□□ -0.62
ERGIC3-214ENST00000482338 HYPKQ9NX55 129 aa11.18□□□□□ -0.62
ERGIC3-214ENST00000482338 DDX19BQ9UMR2 479 aa11.18□□□□□ -0.62
ERGIC3-214ENST00000482338 RGPD3A6NKT7 1758 aaPredicted RBP11.18□□□□□ -0.62
ERGIC3-214ENST00000482338 RGPD4Q7Z3J3 1758 aa11.18□□□□□ -0.62
ERGIC3-214ENST00000482338 UBR3Q6ZT12 1888 aa11.17□□□□□ -0.62
ERGIC3-214ENST00000482338 TUBGCP6Q96RT7 1819 aa11.17□□□□□ -0.62
ERGIC3-214ENST00000482338 MYL6BP14649 208 aa11.17□□□□□ -0.62
ERGIC3-214ENST00000482338 DNAJC10Q8IXB1 793 aa11.17□□□□□ -0.62
ERGIC3-214ENST00000482338 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
ERGIC3-214ENST00000482338 SCN7AQ01118 1682 aa11.17□□□□□ -0.62
ERGIC3-214ENST00000482338 MYH3P11055 1940 aa11.16□□□□□ -0.62
ERGIC3-214ENST00000482338 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
ERGIC3-214ENST00000482338 A1BGP04217 495 aa11.16□□□□□ -0.62
ERGIC3-214ENST00000482338 NBPF14Q5TI25 921 aa11.16□□□□□ -0.62
ERGIC3-214ENST00000482338 NBPF10Q6P3W6 841 aaKnown RBP11.16□□□□□ -0.62
ERGIC3-214ENST00000482338 SLC4A10Q6U841 1118 aa11.16□□□□□ -0.62
ERGIC3-214ENST00000482338 KRT27Q7Z3Y8 459 aa11.16□□□□□ -0.62
ERGIC3-214ENST00000482338 NBPF15Q8N660 670 aa11.16□□□□□ -0.62
ERGIC3-214ENST00000482338 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
ERGIC3-214ENST00000482338 LOC102724428A0A0B4J2F2 783 aa11.15□□□□□ -0.62
ERGIC3-214ENST00000482338 PI4KAP2A4QPH2 592 aa11.15□□□□□ -0.62
ERGIC3-214ENST00000482338 RXRBP28702 533 aa11.15□□□□□ -0.62
ERGIC3-214ENST00000482338 SIK1P57059 783 aa11.15□□□□□ -0.62
ERGIC3-214ENST00000482338 AIMP1Q12904 312 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-214ENST00000482338 POTEAQ6S8J7 498 aa11.15□□□□□ -0.62
ERGIC3-214ENST00000482338 PI4KAP1Q8N8J0 262 aa11.15□□□□□ -0.62
ERGIC3-214ENST00000482338 XAGE3Q8WTP9 111 aa11.15□□□□□ -0.62
ERGIC3-214ENST00000482338 SMARCC1Q92922 1105 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-214ENST00000482338 TEX13AQ9BXU3 409 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-214ENST00000482338 ZBTB7BO15156 539 aaPredicted RBP11.14□□□□□ -0.63
ERGIC3-214ENST00000482338 CYP19A1P11511 503 aaPredicted RBP11.14□□□□□ -0.63
ERGIC3-214ENST00000482338 CCT4P50991 539 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-214ENST00000482338 AAMPQ13685 434 aa11.14□□□□□ -0.63
ERGIC3-214ENST00000482338 COPS6Q7L5N1 327 aa11.14□□□□□ -0.63
ERGIC3-214ENST00000482338 DNAAF4Q8WXU2 420 aa11.14□□□□□ -0.63
ERGIC3-214ENST00000482338 ZBTB40Q9NUA8 1239 aa11.14□□□□□ -0.63
ERGIC3-214ENST00000482338 EP400Q96L91 3159 aa11.14□□□□□ -0.63
ERGIC3-214ENST00000482338 LAMB2P55268 1798 aa11.13□□□□□ -0.63
ERGIC3-214ENST00000482338 STARD3NLO95772 234 aa11.13□□□□□ -0.63
ERGIC3-214ENST00000482338 DDX58O95786 925 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-214ENST00000482338 ATP6V1AP38606 617 aa11.13□□□□□ -0.63
ERGIC3-214ENST00000482338 ITPK1Q13572 414 aa11.13□□□□□ -0.63
ERGIC3-214ENST00000482338 KSR2Q6VAB6 950 aa11.13□□□□□ -0.63
ERGIC3-214ENST00000482338 MAP3K2Q9Y2U5 619 aa11.13□□□□□ -0.63
ERGIC3-214ENST00000482338 PCDHB15Q9Y5E8 787 aa11.13□□□□□ -0.63
ERGIC3-214ENST00000482338 BEND3Q5T5X7 828 aa11.12□□□□□ -0.63
ERGIC3-214ENST00000482338 FAM196AQ6ZSG2 479 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms