RNA–Protein interactions for RNA: ENST00000480768.1

GTF2A2-207, Transcript of general transcription factor IIA subunit 2, humanhuman

TSL 2

Gene GTF2A2, Length 1,278 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-207ENST00000480768 WDR43Q15061 677 aaKnown RBP eCLIP20.74■□□□□ 0.91
GTF2A2-207ENST00000480768 CCDC146Q8IYE0 955 aa20.74■□□□□ 0.91
GTF2A2-207ENST00000480768 RFC4P35249 363 aa20.73■□□□□ 0.91
GTF2A2-207ENST00000480768 CCDC87Q9NVE4 849 aa20.73■□□□□ 0.91
GTF2A2-207ENST00000480768 VSIG10Q8N0Z9 540 aa20.72■□□□□ 0.91
GTF2A2-207ENST00000480768 THUMPD2Q9BTF0 503 aaKnown RBP20.72■□□□□ 0.91
GTF2A2-207ENST00000480768 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
GTF2A2-207ENST00000480768 HEG1Q9ULI3 1381 aa20.72■□□□□ 0.91
GTF2A2-207ENST00000480768 FMNL2Q96PY5 1086 aa20.71■□□□□ 0.91
GTF2A2-207ENST00000480768 ADAMTS8Q9UP79 889 aa20.71■□□□□ 0.91
GTF2A2-207ENST00000480768 CANXP27824 592 aaKnown RBP20.69■□□□□ 0.9
GTF2A2-207ENST00000480768 RIPK4P57078 832 aa20.69■□□□□ 0.9
GTF2A2-207ENST00000480768 TAF7Q15545 349 aaPredicted RBP20.69■□□□□ 0.9
GTF2A2-207ENST00000480768 SRP68Q9UHB9 627 aaKnown RBP20.69■□□□□ 0.9
GTF2A2-207ENST00000480768 ZBTB1Q9Y2K1 713 aa20.69■□□□□ 0.9
GTF2A2-207ENST00000480768 RRP7AQ9Y3A4 280 aaKnown RBP20.69■□□□□ 0.9
GTF2A2-207ENST00000480768 KDM3BQ7LBC6 1761 aa20.69■□□□□ 0.9
GTF2A2-207ENST00000480768 STARD3NLO95772 234 aa20.68■□□□□ 0.9
GTF2A2-207ENST00000480768 NEUROD2Q15784 382 aa20.68■□□□□ 0.9
GTF2A2-207ENST00000480768 FOXD4L1Q9NU39 408 aa20.68■□□□□ 0.9
GTF2A2-207ENST00000480768 MMP10P09238 476 aa20.67■□□□□ 0.9
GTF2A2-207ENST00000480768 GYS1P13807 737 aa20.67■□□□□ 0.9
GTF2A2-207ENST00000480768 CCDC184Q52MB2 194 aa20.67■□□□□ 0.9
GTF2A2-207ENST00000480768 NLGN2Q8NFZ4 835 aa20.67■□□□□ 0.9
GTF2A2-207ENST00000480768 SOS1Q07889 1333 aaPredicted RBP20.67■□□□□ 0.9
GTF2A2-207ENST00000480768 PRAMEF22A3QJZ6 481 aa20.66■□□□□ 0.9
GTF2A2-207ENST00000480768 TMPOP42166 694 aaKnown RBP20.66■□□□□ 0.9
GTF2A2-207ENST00000480768 NLGN1Q8N2Q7 840 aa20.66■□□□□ 0.9
GTF2A2-207ENST00000480768 RUNDC1Q96C34 613 aa20.66■□□□□ 0.9
GTF2A2-207ENST00000480768 TEX13AQ9BXU3 409 aaPredicted RBP20.66■□□□□ 0.9
GTF2A2-207ENST00000480768 CAPN15O75808 1086 aa20.65■□□□□ 0.9
GTF2A2-207ENST00000480768 USP42Q9H9J4 1324 aaKnown RBP20.64■□□□□ 0.89
GTF2A2-207ENST00000480768 ANP32CO43423 234 aa20.64■□□□□ 0.89
GTF2A2-207ENST00000480768 A1BGP04217 495 aa20.64■□□□□ 0.89
GTF2A2-207ENST00000480768 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
GTF2A2-207ENST00000480768 COL15A1P39059 1388 aa20.63■□□□□ 0.89
GTF2A2-207ENST00000480768 ZPR1O75312 459 aa20.63■□□□□ 0.89
GTF2A2-207ENST00000480768 FKBP8Q14318 412 aa20.63■□□□□ 0.89
GTF2A2-207ENST00000480768 USPL1Q5W0Q7 1092 aa20.63■□□□□ 0.89
GTF2A2-207ENST00000480768 USP16Q9Y5T5 823 aa20.63■□□□□ 0.89
GTF2A2-207ENST00000480768 U3KPZ7 1027 aaPredicted RBP20.63■□□□□ 0.89
GTF2A2-207ENST00000480768 SNRPA1P09661 255 aaKnown RBP20.62■□□□□ 0.89
GTF2A2-207ENST00000480768 PIP4K2AP48426 406 aaPredicted RBP20.62■□□□□ 0.89
GTF2A2-207ENST00000480768 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
GTF2A2-207ENST00000480768 PNISRQ8TF01 805 aaKnown RBP20.62■□□□□ 0.89
GTF2A2-207ENST00000480768 DSG3P32926 999 aa20.61■□□□□ 0.89
GTF2A2-207ENST00000480768 CD2APQ9Y5K6 639 aa20.61■□□□□ 0.89
GTF2A2-207ENST00000480768 LAMB4A4D0S4 1761 aa20.61■□□□□ 0.89
GTF2A2-207ENST00000480768 N4BP2Q86UW6 1770 aaPredicted RBP20.6■□□□□ 0.89
GTF2A2-207ENST00000480768 EIF5P55010 431 aaKnown RBP20.6■□□□□ 0.89
GTF2A2-207ENST00000480768 LMOD3Q0VAK6 560 aa20.6■□□□□ 0.89
GTF2A2-207ENST00000480768 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
GTF2A2-207ENST00000480768 KIF13BQ9NQT8 1826 aa20.6■□□□□ 0.89
GTF2A2-207ENST00000480768 GPR162Q16538 588 aa20.59■□□□□ 0.89
GTF2A2-207ENST00000480768 PARP3Q9Y6F1 533 aa20.59■□□□□ 0.89
GTF2A2-207ENST00000480768 AFDNP55196 1824 aaKnown RBP20.59■□□□□ 0.89
GTF2A2-207ENST00000480768 TRIM35Q9UPQ4 493 aa20.58■□□□□ 0.89
GTF2A2-207ENST00000480768 TBC1D2BQ9UPU7 963 aa20.58■□□□□ 0.89
GTF2A2-207ENST00000480768 CHD4Q14839 1912 aa20.58■□□□□ 0.88
GTF2A2-207ENST00000480768 A0A087WZG4 1122 aa20.57■□□□□ 0.88
GTF2A2-207ENST00000480768 SLC4A2P04920 1241 aa20.57■□□□□ 0.88
GTF2A2-207ENST00000480768 IL6STP40189 918 aaPredicted RBP20.57■□□□□ 0.88
GTF2A2-207ENST00000480768 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
GTF2A2-207ENST00000480768 MRS2Q9HD23 443 aa20.57■□□□□ 0.88
GTF2A2-207ENST00000480768 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
GTF2A2-207ENST00000480768 WWC3Q9ULE0 1092 aa20.57■□□□□ 0.88
GTF2A2-207ENST00000480768 APAF1O14727 1248 aa20.56■□□□□ 0.88
GTF2A2-207ENST00000480768 DDR1Q08345 913 aa20.56■□□□□ 0.88
GTF2A2-207ENST00000480768 NPM2Q86SE8 214 aaKnown RBP20.56■□□□□ 0.88
GTF2A2-207ENST00000480768 BCL2L12Q9HB09 334 aa20.56■□□□□ 0.88
GTF2A2-207ENST00000480768 SPINK5Q9NQ38 1064 aaPredicted RBP20.56■□□□□ 0.88
GTF2A2-207ENST00000480768 LAS1LQ9Y4W2 734 aaKnown RBP20.56■□□□□ 0.88
GTF2A2-207ENST00000480768 GOLGB1Q14789 3259 aaKnown RBP20.56■□□□□ 0.88
GTF2A2-207ENST00000480768 SCN7AQ01118 1682 aa20.55■□□□□ 0.88
GTF2A2-207ENST00000480768 SENP3-EIF4A1A0A087X0R7 540 aa20.55■□□□□ 0.88
GTF2A2-207ENST00000480768 KIAA1551Q9HCM1 1747 aa20.55■□□□□ 0.88
GTF2A2-207ENST00000480768 NBPF26B4DH59 902 aa20.54■□□□□ 0.88
GTF2A2-207ENST00000480768 GIGYF1O75420 1035 aaPredicted RBP20.54■□□□□ 0.88
GTF2A2-207ENST00000480768 TM4SF1P30408 202 aa20.54■□□□□ 0.88
GTF2A2-207ENST00000480768 NBPF10Q6P3W6 841 aaKnown RBP20.54■□□□□ 0.88
GTF2A2-207ENST00000480768 BICDL1Q6ZP65 573 aa20.54■□□□□ 0.88
GTF2A2-207ENST00000480768 NBPF15Q8N660 670 aa20.54■□□□□ 0.88
GTF2A2-207ENST00000480768 BCORQ6W2J9 1755 aa20.54■□□□□ 0.88
GTF2A2-207ENST00000480768 NFIXQ14938 502 aa20.53■□□□□ 0.88
GTF2A2-207ENST00000480768 UTRNP46939 3433 aa20.52■□□□□ 0.88
GTF2A2-207ENST00000480768 POLRMTO00411 1230 aaKnown RBP20.52■□□□□ 0.88
GTF2A2-207ENST00000480768 YBX3P16989 372 aaKnown RBP eCLIP20.52■□□□□ 0.88
GTF2A2-207ENST00000480768 YY1P25490 414 aa20.52■□□□□ 0.88
GTF2A2-207ENST00000480768 C10orf71Q711Q0 1435 aa20.52■□□□□ 0.87
GTF2A2-207ENST00000480768 DZIP3Q86Y13 1208 aaKnown RBP20.51■□□□□ 0.87
GTF2A2-207ENST00000480768 A0A0G2JLW4 131 aa20.5■□□□□ 0.87
GTF2A2-207ENST00000480768 NGEFQ8N5V2 710 aa20.5■□□□□ 0.87
GTF2A2-207ENST00000480768 CHL1O00533 1208 aa20.49■□□□□ 0.87
GTF2A2-207ENST00000480768 CAMTA2O94983 1202 aa20.49■□□□□ 0.87
GTF2A2-207ENST00000480768 TBC1D9BQ66K14 1250 aa20.49■□□□□ 0.87
GTF2A2-207ENST00000480768 BABAM1Q9NWV8 329 aa20.49■□□□□ 0.87
GTF2A2-207ENST00000480768 NRXN2Q9P2S2 1712 aa20.49■□□□□ 0.87
GTF2A2-207ENST00000480768 PXDNLA1KZ92 1463 aa20.49■□□□□ 0.87
GTF2A2-207ENST00000480768 BRCA1P38398 1863 aaKnown RBP20.48■□□□□ 0.87
GTF2A2-207ENST00000480768 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms