RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 BMS1Q14692 1282 aaKnown RBP12.66□□□□□ -0.38
SIK3-210ENST00000480468 RBM43Q6ZSC3 357 aaKnown RBP12.66□□□□□ -0.38
SIK3-210ENST00000480468 NUP62CLQ9H1M0 184 aa12.66□□□□□ -0.38
SIK3-210ENST00000480468 ZNF215Q9UL58 517 aaPredicted RBP12.66□□□□□ -0.38
SIK3-210ENST00000480468 LIMCH1Q9UPQ0 1083 aa12.66□□□□□ -0.38
SIK3-210ENST00000480468 SMC3Q9UQE7 1217 aa12.66□□□□□ -0.38
SIK3-210ENST00000480468 KIF2AO00139 706 aaPredicted RBP12.66□□□□□ -0.38
SIK3-210ENST00000480468 MEIS3Q99687 375 aa12.66□□□□□ -0.38
SIK3-210ENST00000480468 NOL10Q9BSC4 688 aaKnown RBP12.66□□□□□ -0.38
SIK3-210ENST00000480468 RAD50Q92878 1312 aa12.65□□□□□ -0.38
SIK3-210ENST00000480468 DLG5Q8TDM6 1919 aa12.65□□□□□ -0.38
SIK3-210ENST00000480468 DRC7Q8IY82 874 aa12.65□□□□□ -0.38
SIK3-210ENST00000480468 CACTINQ8WUQ7 758 aaKnown RBP12.65□□□□□ -0.38
SIK3-210ENST00000480468 CBX8Q9HC52 389 aa12.65□□□□□ -0.38
SIK3-210ENST00000480468 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
SIK3-210ENST00000480468 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
SIK3-210ENST00000480468 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.38
SIK3-210ENST00000480468 TRIM5Q9C035 493 aa12.65□□□□□ -0.38
SIK3-210ENST00000480468 FEZ2Q9UHY8 353 aaPredicted RBP12.65□□□□□ -0.38
SIK3-210ENST00000480468 ERICH4A6NGS2 130 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 SLU7O95391 586 aaKnown RBP12.64□□□□□ -0.39
SIK3-210ENST00000480468 H2AFXP16104 143 aaPredicted RBP12.64□□□□□ -0.39
SIK3-210ENST00000480468 DNM1Q05193 864 aaKnown RBP12.64□□□□□ -0.39
SIK3-210ENST00000480468 PTPN14Q15678 1187 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 NRBP1Q9UHY1 535 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 HTATSF1O43719 755 aaKnown RBP12.64□□□□□ -0.39
SIK3-210ENST00000480468 MUM1L1Q5H9M0 696 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 SARM1Q6SZW1 724 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 LRRCC1Q9C099 1032 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 EFCC1Q9HA90 598 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 ZNF446Q9NWS9 450 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.64□□□□□ -0.39
SIK3-210ENST00000480468 POLKQ9UBT6 870 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 CLIP2Q9UDT6 1046 aa12.64□□□□□ -0.39
SIK3-210ENST00000480468 ERBB3P21860 1342 aa12.63□□□□□ -0.39
SIK3-210ENST00000480468 HNRNPH2P55795 449 aaKnown RBP12.63□□□□□ -0.39
SIK3-210ENST00000480468 ELF2Q15723 593 aa12.63□□□□□ -0.39
SIK3-210ENST00000480468 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
SIK3-210ENST00000480468 DDX19AQ9NUU7 478 aaKnown RBP12.63□□□□□ -0.39
SIK3-210ENST00000480468 PIK3C2BO00750 1634 aa12.63□□□□□ -0.39
SIK3-210ENST00000480468 AK2P54819 239 aa12.62□□□□□ -0.39
SIK3-210ENST00000480468 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
SIK3-210ENST00000480468 KRT24Q2M2I5 525 aa12.62□□□□□ -0.39
SIK3-210ENST00000480468 ANO6Q4KMQ2 910 aa12.62□□□□□ -0.39
SIK3-210ENST00000480468 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
SIK3-210ENST00000480468 LRRC8AQ8IWT6 810 aa12.62□□□□□ -0.39
SIK3-210ENST00000480468 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
SIK3-210ENST00000480468 MRFAP1L1Q96HT8 127 aa12.62□□□□□ -0.39
SIK3-210ENST00000480468 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
SIK3-210ENST00000480468 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
SIK3-210ENST00000480468 IL13P35225 146 aa12.62□□□□□ -0.39
SIK3-210ENST00000480468 IRX3P78415 501 aaPredicted RBP12.62□□□□□ -0.39
SIK3-210ENST00000480468 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
SIK3-210ENST00000480468 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
SIK3-210ENST00000480468 SH2B1Q9NRF2 756 aaPredicted RBP12.62□□□□□ -0.39
SIK3-210ENST00000480468 SNX14Q9Y5W7 946 aa12.62□□□□□ -0.39
SIK3-210ENST00000480468 NEXMIFQ5QGS0 1516 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 AATKQ6ZMQ8 1374 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 CCT4P50991 539 aaKnown RBP12.61□□□□□ -0.39
SIK3-210ENST00000480468 KRT85P78386 507 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 ZNF592Q92610 1267 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 TNMDQ9H2S6 317 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 L2HGDHQ9H9P8 463 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 FHOD1Q9Y613 1164 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 NPATQ14207 1427 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 ADGRL3Q9HAR2 1447 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 HMOX1P09601 288 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 RAD51AP2Q09MP3 1159 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 CCDC144BQ3MJ40 725 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 TXLNBQ8N3L3 684 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 RILPL2Q969X0 211 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 CLSTN2Q9H4D0 955 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 TTC21AQ8NDW8 1320 aa12.61□□□□□ -0.39
SIK3-210ENST00000480468 TUBB4AP04350 444 aa12.6□□□□□ -0.39
SIK3-210ENST00000480468 GJB2P29033 226 aa12.6□□□□□ -0.39
SIK3-210ENST00000480468 TEX35Q5T0J7 233 aa12.6□□□□□ -0.39
SIK3-210ENST00000480468 TTC6Q86TZ1 520 aa12.6□□□□□ -0.39
SIK3-210ENST00000480468 YY1AP1Q9H869 796 aa12.6□□□□□ -0.39
SIK3-210ENST00000480468 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
SIK3-210ENST00000480468 GNAI2P04899 355 aa12.6□□□□□ -0.39
SIK3-210ENST00000480468 LIG1P18858 919 aa12.6□□□□□ -0.39
SIK3-210ENST00000480468 ST7Q9NRC1 585 aa12.6□□□□□ -0.39
SIK3-210ENST00000480468 NPHP3Q7Z494 1330 aa12.59□□□□□ -0.39
SIK3-210ENST00000480468 PREX1Q8TCU6 1659 aa12.59□□□□□ -0.39
SIK3-210ENST00000480468 PTPRMP28827 1452 aa12.59□□□□□ -0.39
SIK3-210ENST00000480468 SGSM2O43147 1006 aa12.59□□□□□ -0.39
SIK3-210ENST00000480468 ZNF165P49910 485 aa12.59□□□□□ -0.39
SIK3-210ENST00000480468 TPM4P67936 248 aa12.59□□□□□ -0.39
SIK3-210ENST00000480468 TSHZ3Q63HK5 1081 aa12.59□□□□□ -0.39
SIK3-210ENST00000480468 CCAR2Q8N163 923 aaKnown RBP12.59□□□□□ -0.39
SIK3-210ENST00000480468 SCAND2PQ9GZW5 306 aaPredicted RBP12.59□□□□□ -0.39
SIK3-210ENST00000480468 HYPKQ9NX55 129 aa12.59□□□□□ -0.39
SIK3-210ENST00000480468 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
SIK3-210ENST00000480468 MAP2P11137 1827 aaKnown RBP12.59□□□□□ -0.39
SIK3-210ENST00000480468 USP27XA6NNY8 438 aa12.58□□□□□ -0.39
SIK3-210ENST00000480468 CHL1O00533 1208 aa12.58□□□□□ -0.39
SIK3-210ENST00000480468 ATP8B1O43520 1251 aa12.58□□□□□ -0.39
SIK3-210ENST00000480468 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms