RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 LOC102724428A0A0B4J2F2 783 aa16.01■□□□□ 0.15
TRA2B-212ENST00000480461 SIK1P57059 783 aa16.01■□□□□ 0.15
TRA2B-212ENST00000480461 ITPK1Q13572 414 aa16.01■□□□□ 0.15
TRA2B-212ENST00000480461 C4BP0C0L5 1744 aa16■□□□□ 0.15
TRA2B-212ENST00000480461 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
TRA2B-212ENST00000480461 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
TRA2B-212ENST00000480461 SIPA1L3O60292 1781 aaPredicted RBP16■□□□□ 0.15
TRA2B-212ENST00000480461 VIRMAQ69YN4 1812 aaKnown RBP15.99■□□□□ 0.15
TRA2B-212ENST00000480461 PRAMEF22A3QJZ6 481 aa15.99■□□□□ 0.15
TRA2B-212ENST00000480461 APLP1P51693 650 aa15.99■□□□□ 0.15
TRA2B-212ENST00000480461 FLAD1Q8NFF5 587 aa15.99■□□□□ 0.15
TRA2B-212ENST00000480461 CFAP44Q96MT7 982 aa15.99■□□□□ 0.15
TRA2B-212ENST00000480461 WWC3Q9ULE0 1092 aa15.99■□□□□ 0.15
TRA2B-212ENST00000480461 EIF4A1P60842 406 aaKnown RBP15.98■□□□□ 0.15
TRA2B-212ENST00000480461 KRT24Q2M2I5 525 aa15.98■□□□□ 0.15
TRA2B-212ENST00000480461 WDR63Q8IWG1 891 aa15.98■□□□□ 0.15
TRA2B-212ENST00000480461 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
TRA2B-212ENST00000480461 MBIPQ9NS73 344 aa15.98■□□□□ 0.15
TRA2B-212ENST00000480461 KCPQ6ZWJ8 1503 aa15.98■□□□□ 0.15
TRA2B-212ENST00000480461 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
TRA2B-212ENST00000480461 ATP6V1AP38606 617 aa15.97■□□□□ 0.15
TRA2B-212ENST00000480461 AMIGO3Q86WK7 504 aa15.97■□□□□ 0.15
TRA2B-212ENST00000480461 LINC00116Q8NCU8 138 aa15.97■□□□□ 0.15
TRA2B-212ENST00000480461 CDCA7LQ96GN5 454 aa15.97■□□□□ 0.15
TRA2B-212ENST00000480461 IFT57Q9NWB7 429 aa15.97■□□□□ 0.15
TRA2B-212ENST00000480461 BABAM1Q9NWV8 329 aa15.97■□□□□ 0.15
TRA2B-212ENST00000480461 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
TRA2B-212ENST00000480461 HEG1Q9ULI3 1381 aa15.97■□□□□ 0.15
TRA2B-212ENST00000480461 HNRNPUQ00839 825 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRA2B-212ENST00000480461 DNAJC10Q8IXB1 793 aa15.96■□□□□ 0.15
TRA2B-212ENST00000480461 DNAJC5GQ8N7S2 189 aa15.96■□□□□ 0.15
TRA2B-212ENST00000480461 TSR2Q969E8 191 aaKnown RBP15.96■□□□□ 0.15
TRA2B-212ENST00000480461 IL16Q14005 1332 aa15.95■□□□□ 0.14
TRA2B-212ENST00000480461 SMIM5Q71RC9 77 aa15.95■□□□□ 0.14
TRA2B-212ENST00000480461 TTC5Q8N0Z6 440 aa15.95■□□□□ 0.14
TRA2B-212ENST00000480461 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
TRA2B-212ENST00000480461 WDR90Q96KV7 1748 aa15.94■□□□□ 0.14
TRA2B-212ENST00000480461 GNAI1P63096 354 aa15.94■□□□□ 0.14
TRA2B-212ENST00000480461 CALD1Q05682 793 aaKnown RBP15.94■□□□□ 0.14
TRA2B-212ENST00000480461 PIAS4Q8N2W9 510 aaPredicted RBP15.94■□□□□ 0.14
TRA2B-212ENST00000480461 FMNL2Q96PY5 1086 aa15.94■□□□□ 0.14
TRA2B-212ENST00000480461 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
TRA2B-212ENST00000480461 CYP19A1P11511 503 aaPredicted RBP15.93■□□□□ 0.14
TRA2B-212ENST00000480461 VSIG10Q8N0Z9 540 aa15.93■□□□□ 0.14
TRA2B-212ENST00000480461 C8orf58Q8NAV2 365 aa15.93■□□□□ 0.14
TRA2B-212ENST00000480461 AK7Q96M32 723 aa15.93■□□□□ 0.14
TRA2B-212ENST00000480461 TOMM70O94826 608 aa15.92■□□□□ 0.14
TRA2B-212ENST00000480461 PHF14O94880 888 aa15.92■□□□□ 0.14
TRA2B-212ENST00000480461 HMGB2P26583 209 aaKnown RBP15.92■□□□□ 0.14
TRA2B-212ENST00000480461 SLFN5Q08AF3 891 aa15.92■□□□□ 0.14
TRA2B-212ENST00000480461 INTS5Q6P9B9 1019 aaKnown RBP15.92■□□□□ 0.14
TRA2B-212ENST00000480461 TRMT2AQ8IZ69 625 aaKnown RBP15.92■□□□□ 0.14
TRA2B-212ENST00000480461 TSPYL6Q8N831 410 aa15.92■□□□□ 0.14
TRA2B-212ENST00000480461 KIF13BQ9NQT8 1826 aa15.91■□□□□ 0.14
TRA2B-212ENST00000480461 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
TRA2B-212ENST00000480461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.91■□□□□ 0.14
TRA2B-212ENST00000480461 SNRPA1P09661 255 aaKnown RBP15.91■□□□□ 0.14
TRA2B-212ENST00000480461 GOLGA2Q08379 1002 aa15.91■□□□□ 0.14
TRA2B-212ENST00000480461 KDM3BQ7LBC6 1761 aa15.9■□□□□ 0.14
TRA2B-212ENST00000480461 UBR2Q8IWV8 1755 aa15.9■□□□□ 0.14
TRA2B-212ENST00000480461 ELL2O00472 640 aaPredicted RBP15.9■□□□□ 0.14
TRA2B-212ENST00000480461 A1BGP04217 495 aa15.9■□□□□ 0.14
TRA2B-212ENST00000480461 FANCIQ9NVI1 1328 aa15.9■□□□□ 0.14
TRA2B-212ENST00000480461 SSFA2P28290 1259 aa15.89■□□□□ 0.13
TRA2B-212ENST00000480461 CRKLP46109 303 aaKnown RBP15.89■□□□□ 0.13
TRA2B-212ENST00000480461 NBPF26B4DH59 902 aa15.88■□□□□ 0.13
TRA2B-212ENST00000480461 PIP4K2AP48426 406 aaPredicted RBP15.88■□□□□ 0.13
TRA2B-212ENST00000480461 EXOSC9Q06265 439 aaKnown RBP15.88■□□□□ 0.13
TRA2B-212ENST00000480461 COL13A1Q5TAT6 717 aaPredicted RBP15.88■□□□□ 0.13
TRA2B-212ENST00000480461 RC3H1Q5TC82 1133 aaKnown RBP15.88■□□□□ 0.13
TRA2B-212ENST00000480461 DUSP27Q5VZP5 1158 aa15.88■□□□□ 0.13
TRA2B-212ENST00000480461 NBPF10Q6P3W6 841 aaKnown RBP15.88■□□□□ 0.13
TRA2B-212ENST00000480461 NBPF15Q8N660 670 aa15.88■□□□□ 0.13
TRA2B-212ENST00000480461 NMRK2Q9NPI5 230 aa15.88■□□□□ 0.13
TRA2B-212ENST00000480461 N4BP2Q86UW6 1770 aaPredicted RBP15.87■□□□□ 0.13
TRA2B-212ENST00000480461 TEX13AQ9BXU3 409 aaPredicted RBP15.87■□□□□ 0.13
TRA2B-212ENST00000480461 TJP1Q07157 1748 aa15.87■□□□□ 0.13
TRA2B-212ENST00000480461 ZNF831Q5JPB2 1677 aa15.86■□□□□ 0.13
TRA2B-212ENST00000480461 E9PSI1 815 aa15.86■□□□□ 0.13
TRA2B-212ENST00000480461 PDIA6Q15084 440 aa15.86■□□□□ 0.13
TRA2B-212ENST00000480461 NECTIN2Q92692 538 aa15.86■□□□□ 0.13
TRA2B-212ENST00000480461 CCDC87Q9NVE4 849 aa15.86■□□□□ 0.13
TRA2B-212ENST00000480461 ZBTB1Q9Y2K1 713 aa15.86■□□□□ 0.13
TRA2B-212ENST00000480461 ZBED9Q6R2W3 1325 aa15.86■□□□□ 0.13
TRA2B-212ENST00000480461 CNTNAP4Q9C0A0 1308 aa15.86■□□□□ 0.13
TRA2B-212ENST00000480461 C10orf71Q711Q0 1435 aa15.85■□□□□ 0.13
TRA2B-212ENST00000480461 VAMP4O75379 141 aa15.85■□□□□ 0.13
TRA2B-212ENST00000480461 RPS6KA4O75676 772 aa15.85■□□□□ 0.13
TRA2B-212ENST00000480461 STARD3NLO95772 234 aa15.85■□□□□ 0.13
TRA2B-212ENST00000480461 EIF2S2P20042 333 aaKnown RBP15.85■□□□□ 0.13
TRA2B-212ENST00000480461 HTRA3P83110 453 aa15.85■□□□□ 0.13
TRA2B-212ENST00000480461 JMYQ8N9B5 988 aa15.85■□□□□ 0.13
TRA2B-212ENST00000480461 KLRG1Q96E93 195 aa15.85■□□□□ 0.13
TRA2B-212ENST00000480461 MYH16Q9H6N6 1097 aa15.85■□□□□ 0.13
TRA2B-212ENST00000480461 MYH14Q7Z406 1995 aaKnown RBP15.84■□□□□ 0.13
TRA2B-212ENST00000480461 GNPATO15228 680 aa15.84■□□□□ 0.13
TRA2B-212ENST00000480461 MMP10P09238 476 aa15.84■□□□□ 0.13
TRA2B-212ENST00000480461 CANXP27824 592 aaKnown RBP15.84■□□□□ 0.13
TRA2B-212ENST00000480461 PROSER3Q2NL68 480 aa15.84■□□□□ 0.13
TRA2B-212ENST00000480461 LRP10Q7Z4F1 713 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms