RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 TIE1P35590 1138 aa13.37□□□□□ -0.27
LINC00173-203ENST00000480237 IFNL2Q8IZJ0 200 aa13.37□□□□□ -0.27
LINC00173-203ENST00000480237 LGR6Q9HBX8 967 aa13.37□□□□□ -0.27
LINC00173-203ENST00000480237 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
LINC00173-203ENST00000480237 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
LINC00173-203ENST00000480237 ARFGEF2Q9Y6D5 1785 aa13.37□□□□□ -0.27
LINC00173-203ENST00000480237 ZKSCAN2Q63HK3 967 aa13.37□□□□□ -0.27
LINC00173-203ENST00000480237 BRWD3Q6RI45 1802 aa13.36□□□□□ -0.27
LINC00173-203ENST00000480237 DISP2A7MBM2 1401 aa13.36□□□□□ -0.27
LINC00173-203ENST00000480237 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
LINC00173-203ENST00000480237 PDE3AQ14432 1141 aa13.36□□□□□ -0.27
LINC00173-203ENST00000480237 KRT24Q2M2I5 525 aa13.36□□□□□ -0.27
LINC00173-203ENST00000480237 TTLL13PA6NNM8 815 aa13.35□□□□□ -0.27
LINC00173-203ENST00000480237 MS4A1P11836 297 aa13.35□□□□□ -0.27
LINC00173-203ENST00000480237 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
LINC00173-203ENST00000480237 FTSJ3Q8IY81 847 aaKnown RBP13.35□□□□□ -0.27
LINC00173-203ENST00000480237 ZCRB1Q8TBF4 217 aaKnown RBP13.35□□□□□ -0.27
LINC00173-203ENST00000480237 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
LINC00173-203ENST00000480237 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
LINC00173-203ENST00000480237 CYP27B1O15528 508 aa13.34□□□□□ -0.27
LINC00173-203ENST00000480237 B4GALNT3Q6L9W6 998 aa13.34□□□□□ -0.27
LINC00173-203ENST00000480237 CCDC136Q96JN2 1154 aa13.34□□□□□ -0.27
LINC00173-203ENST00000480237 SPATA31A6Q5VVP1 1343 aa13.34□□□□□ -0.27
LINC00173-203ENST00000480237 THSD7AQ9UPZ6 1657 aa13.33□□□□□ -0.27
LINC00173-203ENST00000480237 BTBD11A6QL63 1104 aa13.33□□□□□ -0.28
LINC00173-203ENST00000480237 IPO8O15397 1037 aaKnown RBP13.33□□□□□ -0.28
LINC00173-203ENST00000480237 PANK1Q8TE04 598 aa13.33□□□□□ -0.28
LINC00173-203ENST00000480237 NUP188Q5SRE5 1749 aa13.33□□□□□ -0.28
LINC00173-203ENST00000480237 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
LINC00173-203ENST00000480237 TCERG1O14776 1098 aaKnown RBP13.32□□□□□ -0.28
LINC00173-203ENST00000480237 MRPL50Q8N5N7 158 aaKnown RBP13.32□□□□□ -0.28
LINC00173-203ENST00000480237 DCAF5Q96JK2 942 aa13.32□□□□□ -0.28
LINC00173-203ENST00000480237 NOB1Q9ULX3 412 aaKnown RBP13.32□□□□□ -0.28
LINC00173-203ENST00000480237 BTAF1O14981 1849 aa13.32□□□□□ -0.28
LINC00173-203ENST00000480237 ANKRD36CQ5JPF3 1778 aa13.32□□□□□ -0.28
LINC00173-203ENST00000480237 TJP1Q07157 1748 aa13.32□□□□□ -0.28
LINC00173-203ENST00000480237 BRPF1P55201 1214 aaPredicted RBP13.32□□□□□ -0.28
LINC00173-203ENST00000480237 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
LINC00173-203ENST00000480237 DZIP1LQ8IYY4 767 aaKnown RBP13.32□□□□□ -0.28
LINC00173-203ENST00000480237 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
LINC00173-203ENST00000480237 TNNQ9UQP3 1299 aa13.32□□□□□ -0.28
LINC00173-203ENST00000480237 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
LINC00173-203ENST00000480237 TRIM27P14373 513 aa13.31□□□□□ -0.28
LINC00173-203ENST00000480237 HSPA1LP34931 641 aa13.31□□□□□ -0.28
LINC00173-203ENST00000480237 ATN1P54259 1190 aaPredicted RBP13.31□□□□□ -0.28
LINC00173-203ENST00000480237 PELP1Q8IZL8 1130 aaKnown RBP13.31□□□□□ -0.28
LINC00173-203ENST00000480237 C8orf37Q96NL8 207 aa13.31□□□□□ -0.28
LINC00173-203ENST00000480237 SLC52A2Q9HAB3 445 aa13.31□□□□□ -0.28
LINC00173-203ENST00000480237 COG6Q9Y2V7 657 aa13.31□□□□□ -0.28
LINC00173-203ENST00000480237 SPATA31A1Q5TZJ5 1347 aa13.3□□□□□ -0.28
LINC00173-203ENST00000480237 HS6ST3Q8IZP7 471 aa13.3□□□□□ -0.28
LINC00173-203ENST00000480237 CCDC9Q9Y3X0 531 aaKnown RBP13.3□□□□□ -0.28
LINC00173-203ENST00000480237 KCPQ6ZWJ8 1503 aa13.29□□□□□ -0.28
LINC00173-203ENST00000480237 RLBP1P12271 317 aa13.29□□□□□ -0.28
LINC00173-203ENST00000480237 ASTLQ6HA08 431 aaPredicted RBP13.29□□□□□ -0.28
LINC00173-203ENST00000480237 DDX54Q8TDD1 881 aaKnown RBP13.29□□□□□ -0.28
LINC00173-203ENST00000480237 NGLY1Q96IV0 654 aa13.29□□□□□ -0.28
LINC00173-203ENST00000480237 STK31Q9BXU1 1019 aa13.29□□□□□ -0.28
LINC00173-203ENST00000480237 NHSQ6T4R5 1651 aa13.29□□□□□ -0.28
LINC00173-203ENST00000480237 NUP98P52948 1817 aa13.29□□□□□ -0.28
LINC00173-203ENST00000480237 TAF1LQ8IZX4 1826 aa13.29□□□□□ -0.28
LINC00173-203ENST00000480237 COL5A3P25940 1745 aaPredicted RBP13.29□□□□□ -0.28
LINC00173-203ENST00000480237 EIF4A1P60842 406 aaKnown RBP13.28□□□□□ -0.28
LINC00173-203ENST00000480237 MVPQ14764 893 aaKnown RBP13.28□□□□□ -0.28
LINC00173-203ENST00000480237 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
LINC00173-203ENST00000480237 THRAP3Q9Y2W1 955 aaKnown RBP13.28□□□□□ -0.28
LINC00173-203ENST00000480237 SPATA31A5Q5VU36 1347 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 SPATA31A7Q8IWB4 1347 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 BCL9LQ86UU0 1499 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 MYH3P11055 1940 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 KCNQ3O43525 872 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 HOXB7P09629 217 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 POTEIP0CG38 1075 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 CABP4P57796 275 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 CCDC30Q5VVM6 783 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 ITPRIPQ8IWB1 547 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 ARHGAP45Q92619 1136 aa13.28□□□□□ -0.28
LINC00173-203ENST00000480237 CDCA7Q9BWT1 371 aaPredicted RBP13.28□□□□□ -0.28
LINC00173-203ENST00000480237 API5Q9BZZ5 524 aaKnown RBP13.28□□□□□ -0.28
LINC00173-203ENST00000480237 CICQ96RK0 1608 aaPredicted RBP13.27□□□□□ -0.28
LINC00173-203ENST00000480237 CASZ1Q86V15 1759 aa13.27□□□□□ -0.29
LINC00173-203ENST00000480237 RGS12O14924 1447 aa13.27□□□□□ -0.29
LINC00173-203ENST00000480237 HDGFL1Q5TGJ6 251 aa13.27□□□□□ -0.29
LINC00173-203ENST00000480237 UNC5CLQ8IV45 518 aa13.27□□□□□ -0.29
LINC00173-203ENST00000480237 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
LINC00173-203ENST00000480237 NECTIN2Q92692 538 aa13.27□□□□□ -0.29
LINC00173-203ENST00000480237 PXDNLA1KZ92 1463 aa13.27□□□□□ -0.29
LINC00173-203ENST00000480237 PTPRCP08575 1304 aa13.27□□□□□ -0.29
LINC00173-203ENST00000480237 AK9Q5TCS8 1911 aa13.27□□□□□ -0.29
LINC00173-203ENST00000480237 ZNF831Q5JPB2 1677 aa13.26□□□□□ -0.29
LINC00173-203ENST00000480237 ERVV-2B6SEH9 535 aa13.26□□□□□ -0.29
LINC00173-203ENST00000480237 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
LINC00173-203ENST00000480237 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
LINC00173-203ENST00000480237 ABCC4O15439 1325 aa13.26□□□□□ -0.29
LINC00173-203ENST00000480237 SLC39A6Q13433 755 aa13.25□□□□□ -0.29
LINC00173-203ENST00000480237 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
LINC00173-203ENST00000480237 TMEM57Q8N5G2 664 aa13.25□□□□□ -0.29
LINC00173-203ENST00000480237 DDX19BQ9UMR2 479 aa13.25□□□□□ -0.29
LINC00173-203ENST00000480237 HEG1Q9ULI3 1381 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms