RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 PRMT3O60678 531 aa9.36□□□□□ -0.91
PBRM1-220ENST00000480064 GIGYF1O75420 1035 aaPredicted RBP9.36□□□□□ -0.91
PBRM1-220ENST00000480064 ITGA6P23229 1130 aa9.36□□□□□ -0.91
PBRM1-220ENST00000480064 ZNF211Q13398 564 aaPredicted RBP9.36□□□□□ -0.91
PBRM1-220ENST00000480064 CYLDQ9NQC7 956 aa9.36□□□□□ -0.91
PBRM1-220ENST00000480064 VWA5B2Q8N398 1253 aa9.35□□□□□ -0.91
PBRM1-220ENST00000480064 COL25A1Q9BXS0 654 aaPredicted RBP9.35□□□□□ -0.91
PBRM1-220ENST00000480064 UBXN4Q92575 508 aa9.34□□□□□ -0.91
PBRM1-220ENST00000480064 PPP1R1BQ9UD71 204 aaPredicted RBP9.34□□□□□ -0.91
PBRM1-220ENST00000480064 DCTN4Q9UJW0 460 aa9.34□□□□□ -0.91
PBRM1-220ENST00000480064 CDC14CA4D256 554 aa9.33□□□□□ -0.92
PBRM1-220ENST00000480064 SCNN1AP37088 669 aa9.33□□□□□ -0.92
PBRM1-220ENST00000480064 TSNAXIP1Q2TAA8 658 aa9.33□□□□□ -0.92
PBRM1-220ENST00000480064 SV2AQ7L0J3 742 aa9.33□□□□□ -0.92
PBRM1-220ENST00000480064 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
PBRM1-220ENST00000480064 CXXC1Q9P0U4 656 aaPredicted RBP9.33□□□□□ -0.92
PBRM1-220ENST00000480064 SENP3-EIF4A1A0A087X0R7 540 aa9.32□□□□□ -0.92
PBRM1-220ENST00000480064 ICMTO60725 284 aa9.32□□□□□ -0.92
PBRM1-220ENST00000480064 RECKO95980 971 aa9.32□□□□□ -0.92
PBRM1-220ENST00000480064 SEC13P55735 322 aa9.32□□□□□ -0.92
PBRM1-220ENST00000480064 LYSMD3Q7Z3D4 306 aa9.32□□□□□ -0.92
PBRM1-220ENST00000480064 ASB16Q96NS5 453 aa9.32□□□□□ -0.92
PBRM1-220ENST00000480064 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
PBRM1-220ENST00000480064 C21orf2O43822 256 aa9.31□□□□□ -0.92
PBRM1-220ENST00000480064 CLDN10P78369 228 aa9.31□□□□□ -0.92
PBRM1-220ENST00000480064 PSME1Q06323 249 aa9.31□□□□□ -0.92
PBRM1-220ENST00000480064 NAALADL2Q58DX5 795 aa9.31□□□□□ -0.92
PBRM1-220ENST00000480064 RNFT1Q5M7Z0 435 aa9.31□□□□□ -0.92
PBRM1-220ENST00000480064 FBXO33Q7Z6M2 555 aa9.31□□□□□ -0.92
PBRM1-220ENST00000480064 DOLKQ9UPQ8 538 aa9.31□□□□□ -0.92
PBRM1-220ENST00000480064 RNF144AP50876 292 aaPredicted RBP9.3□□□□□ -0.92
PBRM1-220ENST00000480064 EAPPQ56P03 285 aaPredicted RBP9.3□□□□□ -0.92
PBRM1-220ENST00000480064 RNF20Q5VTR2 975 aa9.3□□□□□ -0.92
PBRM1-220ENST00000480064 SIX5Q8N196 739 aa9.3□□□□□ -0.92
PBRM1-220ENST00000480064 PRIMPOLQ96LW4 560 aa9.3□□□□□ -0.92
PBRM1-220ENST00000480064 ERCC5P28715 1186 aaPredicted RBP9.29□□□□□ -0.92
PBRM1-220ENST00000480064 GTF2IP78347 998 aa9.29□□□□□ -0.92
PBRM1-220ENST00000480064 COL19A1Q14993 1142 aa9.29□□□□□ -0.92
PBRM1-220ENST00000480064 OXLD1Q5BKU9 147 aa9.29□□□□□ -0.92
PBRM1-220ENST00000480064 PRICKLE2Q7Z3G6 844 aa9.29□□□□□ -0.92
PBRM1-220ENST00000480064 PPM1GO15355 546 aaPredicted RBP9.28□□□□□ -0.92
PBRM1-220ENST00000480064 ITGAEP38570 1179 aa9.28□□□□□ -0.92
PBRM1-220ENST00000480064 ERVK-9P63128 1117 aa9.28□□□□□ -0.92
PBRM1-220ENST00000480064 SF3B2Q13435 895 aaKnown RBP9.28□□□□□ -0.92
PBRM1-220ENST00000480064 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
PBRM1-220ENST00000480064 TAS1R3Q7RTX0 852 aa9.28□□□□□ -0.92
PBRM1-220ENST00000480064 PHTF2Q8N3S3 785 aa9.28□□□□□ -0.92
PBRM1-220ENST00000480064 MEN1O00255 615 aa9.27□□□□□ -0.93
PBRM1-220ENST00000480064 SMARCA5O60264 1052 aaPredicted RBP9.27□□□□□ -0.93
PBRM1-220ENST00000480064 A0A1W2PRU2 124 aa9.26□□□□□ -0.93
PBRM1-220ENST00000480064 RHOQP17081 205 aa9.26□□□□□ -0.93
PBRM1-220ENST00000480064 GPC1P35052 558 aa9.26□□□□□ -0.93
PBRM1-220ENST00000480064 KCNMA1Q12791 1236 aa9.26□□□□□ -0.93
PBRM1-220ENST00000480064 ZNF385CQ66K41 422 aaPredicted RBP9.26□□□□□ -0.93
PBRM1-220ENST00000480064 CCDC102BQ68D86 513 aa9.26□□□□□ -0.93
PBRM1-220ENST00000480064 TPCN2Q8NHX9 752 aa9.26□□□□□ -0.93
PBRM1-220ENST00000480064 GTF3C2Q8WUA4 911 aaPredicted RBP9.26□□□□□ -0.93
PBRM1-220ENST00000480064 SPATA32Q96LK8 384 aa9.26□□□□□ -0.93
PBRM1-220ENST00000480064 HINFPQ9BQA5 517 aa9.26□□□□□ -0.93
PBRM1-220ENST00000480064 MKNK1Q9BUB5 465 aa9.26□□□□□ -0.93
PBRM1-220ENST00000480064 SLURP2P0DP57 97 aa9.25□□□□□ -0.93
PBRM1-220ENST00000480064 NCLP19338 710 aaKnown RBP9.25□□□□□ -0.93
PBRM1-220ENST00000480064 OCLNQ16625 522 aa9.25□□□□□ -0.93
PBRM1-220ENST00000480064 RGL4Q8IZJ4 473 aa9.25□□□□□ -0.93
PBRM1-220ENST00000480064 CUEDC1Q9NWM3 386 aaPredicted RBP9.25□□□□□ -0.93
PBRM1-220ENST00000480064 CHIC2Q9UKJ5 165 aa9.25□□□□□ -0.93
PBRM1-220ENST00000480064 ADAMTS8Q9UP79 889 aa9.25□□□□□ -0.93
PBRM1-220ENST00000480064 TAGLNQ01995 201 aaKnown RBP9.24□□□□□ -0.93
PBRM1-220ENST00000480064 FKBP4Q02790 459 aaKnown RBP eCLIP9.24□□□□□ -0.93
PBRM1-220ENST00000480064 SVOPQ8N4V2 548 aa9.24□□□□□ -0.93
PBRM1-220ENST00000480064 KIAA1024Q9UPX6 916 aa9.24□□□□□ -0.93
PBRM1-220ENST00000480064 PCDHB11Q9Y5F2 797 aa9.24□□□□□ -0.93
PBRM1-220ENST00000480064 SFI1A8K8P3 1242 aa9.23□□□□□ -0.93
PBRM1-220ENST00000480064 SCAMP3O14828 347 aaKnown RBP9.23□□□□□ -0.93
PBRM1-220ENST00000480064 PTCD1O75127 700 aaKnown RBP9.23□□□□□ -0.93
PBRM1-220ENST00000480064 SCTRP47872 440 aa9.23□□□□□ -0.93
PBRM1-220ENST00000480064 CYP2U1Q7Z449 544 aa9.23□□□□□ -0.93
PBRM1-220ENST00000480064 WHAMMQ8TF30 809 aa9.23□□□□□ -0.93
PBRM1-220ENST00000480064 NLRP3Q96P20 1036 aa9.23□□□□□ -0.93
PBRM1-220ENST00000480064 FGD1P98174 961 aa9.22□□□□□ -0.93
PBRM1-220ENST00000480064 SLC27A3Q5K4L6 730 aa9.22□□□□□ -0.93
PBRM1-220ENST00000480064 ESF1Q9H501 851 aaKnown RBP9.22□□□□□ -0.93
PBRM1-220ENST00000480064 DNMT3AQ9Y6K1 912 aaPredicted RBP9.22□□□□□ -0.93
PBRM1-220ENST00000480064 GSK3AP49840 483 aa9.21□□□□□ -0.94
PBRM1-220ENST00000480064 POU4F2Q12837 409 aa9.21□□□□□ -0.94
PBRM1-220ENST00000480064 GMCL1Q96IK5 515 aa9.21□□□□□ -0.94
PBRM1-220ENST00000480064 OSBPL3Q9H4L5 887 aa9.21□□□□□ -0.94
PBRM1-220ENST00000480064 MRS2Q9HD23 443 aa9.21□□□□□ -0.94
PBRM1-220ENST00000480064 NDUFB5O43674 189 aa9.2□□□□□ -0.94
PBRM1-220ENST00000480064 ADAMTS2O95450 1211 aa9.2□□□□□ -0.94
PBRM1-220ENST00000480064 XPCQ01831 940 aaPredicted RBP9.2□□□□□ -0.94
PBRM1-220ENST00000480064 CLN3Q13286 438 aa9.2□□□□□ -0.94
PBRM1-220ENST00000480064 TRIM22Q8IYM9 498 aa9.2□□□□□ -0.94
PBRM1-220ENST00000480064 GRIP2Q9C0E4 1043 aa9.2□□□□□ -0.94
PBRM1-220ENST00000480064 SEPT3Q9UH03 358 aa9.2□□□□□ -0.94
PBRM1-220ENST00000480064 RNF225M0QZC1 329 aaPredicted RBP9.19□□□□□ -0.94
PBRM1-220ENST00000480064 ZBTB7BO15156 539 aaPredicted RBP9.19□□□□□ -0.94
PBRM1-220ENST00000480064 ARHGEF15O94989 841 aa9.19□□□□□ -0.94
PBRM1-220ENST00000480064 SRSF11Q05519 484 aaKnown RBP9.19□□□□□ -0.94
PBRM1-220ENST00000480064 MTMR3Q13615 1198 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms