RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 NPHP3Q7Z494 1330 aa4.9□□□□□ -1.62
SCN2A-205ENST00000480032 TBC1D10BQ4KMP7 808 aaPredicted RBP4.9□□□□□ -1.62
SCN2A-205ENST00000480032 CHCHD3Q9NX63 227 aaKnown RBP4.9□□□□□ -1.62
SCN2A-205ENST00000480032 OPA1O60313 960 aa4.9□□□□□ -1.62
SCN2A-205ENST00000480032 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.9□□□□□ -1.62
SCN2A-205ENST00000480032 SLC8A3P57103 927 aa4.9□□□□□ -1.62
SCN2A-205ENST00000480032 ARHGAP31Q2M1Z3 1444 aa4.9□□□□□ -1.62
SCN2A-205ENST00000480032 NAA16Q6N069 864 aaPredicted RBP4.9□□□□□ -1.62
SCN2A-205ENST00000480032 CUX1P39880 1505 aa4.9□□□□□ -1.62
SCN2A-205ENST00000480032 IMMTQ16891 758 aaKnown RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 KIAA0753Q2KHM9 967 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 MAP7D1Q3KQU3 841 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 SPECC1Q5M775 1068 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 NSRP1Q9H0G5 558 aaKnown RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 HOMER1Q86YM7 354 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 CLUAP1Q96AJ1 413 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 GCC1Q96CN9 775 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 CDCA5Q96FF9 252 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 INTS4Q96HW7 963 aaKnown RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 ZFP91Q96JP5 570 aaPredicted RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 LRRCC1Q9C099 1032 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 A1CFQ9NQ94 594 aaKnown RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 CHRM1P11229 460 aaPredicted RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 CCAR1Q8IX12 1150 aaKnown RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 SMC5Q8IY18 1101 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 FRMD4BQ9Y2L6 1034 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 REREQ9P2R6 1566 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 E7ENQ6 273 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 C6orf163Q5TEZ5 329 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 RSPH3Q86UC2 560 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 PHF23Q9BUL5 403 aaPredicted RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 C22orf23Q9BZE7 217 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 UTP6Q9NYH9 597 aaKnown RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 NDUFA13Q9P0J0 144 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 GIGYF1O75420 1035 aaPredicted RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 RASSF2P50749 326 aa4.9□□□□□ -1.63
SCN2A-205ENST00000480032 TEX13AQ9BXU3 409 aaPredicted RBP4.9□□□□□ -1.63
SCN2A-205ENST00000480032 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 FRAT2O75474 233 aaPredicted RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 INTS3Q68E01 1043 aaKnown RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 SRGAP3O43295 1099 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 ZKSCAN1P17029 563 aaPredicted RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 PLCB4Q15147 1175 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 PPP2R5EQ16537 467 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 HOOK3Q86VS8 718 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 RNF8O76064 485 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 NBPF8Q3BBV2 869 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 CPLX2Q6PUV4 134 aaKnown RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 ARMC2Q8NEN0 867 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 TARSL2A2RTX5 802 aaKnown RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 NAP1L1P55209 391 aaKnown RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 CLEC17AQ6ZS10 378 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 FAN1Q9Y2M0 1017 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 TMEM232C9JQI7 657 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 CCDC159P0C7I6 412 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 PIP4K2BP78356 416 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 ANKRD1Q15327 319 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 HDGFL1Q5TGJ6 251 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 NAA15Q9BXJ9 866 aaKnown RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 CFAP65Q6ZU64 1925 aaKnown RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 ARID3CA6NKF2 412 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 MSL3P1P0C860 447 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 ZNF483Q8TF39 744 aaPredicted RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 RRP7AQ9Y3A4 280 aaKnown RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 PDS5BQ9NTI5 1447 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 AREL1O15033 823 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 SUGP1Q8IWZ8 645 aaKnown RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 ERC2O15083 957 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 TRHP20396 242 aaPredicted RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 DEUP1Q05D60 604 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 BICD2Q8TD16 824 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 CABS1Q96KC9 395 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 PYM1Q9BRP8 204 aaKnown RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 DIABLOQ9NR28 239 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 CCDC88BA6NC98 1476 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 IQCA1LA6NCM1 817 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 CCDC92Q53HC0 331 aaPredicted RBP4.89□□□□□ -1.63
SCN2A-205ENST00000480032 WDR63Q8IWG1 891 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 PPFIBP2Q8ND30 876 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 ZNF592Q92610 1267 aa4.89□□□□□ -1.63
SCN2A-205ENST00000480032 CFAP58Q5T655 872 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 CFAP57Q96MR6 1250 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 ZNF148Q9UQR1 794 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 CEP128Q6ZU80 1094 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 CCDC146Q8IYE0 955 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 CCDC110Q8TBZ0 833 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 RABGAP1Q9Y3P9 1069 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 NONOQ15233 471 aaKnown RBP eCLIP4.88□□□□□ -1.63
SCN2A-205ENST00000480032 TERF2Q15554 542 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 LSM14AQ8ND56 463 aaKnown RBP4.88□□□□□ -1.63
SCN2A-205ENST00000480032 PIP4K2CQ8TBX8 421 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 NPC1L1Q9UHC9 1359 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 CDKL5O76039 1030 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 RGS3P49796 1198 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 HOOK2Q96ED9 719 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 ACTR5Q9H9F9 607 aaPredicted RBP4.88□□□□□ -1.63
SCN2A-205ENST00000480032 URI1O94763 535 aaPredicted RBP4.88□□□□□ -1.63
SCN2A-205ENST00000480032 FKBP5Q13451 457 aaPredicted RBP4.88□□□□□ -1.63
SCN2A-205ENST00000480032 SYCP2LQ5T4T6 812 aa4.88□□□□□ -1.63
SCN2A-205ENST00000480032 LAMC3Q9Y6N6 1575 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms