RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 TEAD4Q15561 434 aa10.69□□□□□ -0.7
COMMD3-212ENST00000479958 KANK4Q5T7N3 995 aaPredicted RBP10.69□□□□□ -0.7
COMMD3-212ENST00000479958 FIGNL1Q6PIW4 674 aa10.69□□□□□ -0.7
COMMD3-212ENST00000479958 SLC9A9Q8IVB4 645 aa10.69□□□□□ -0.7
COMMD3-212ENST00000479958 SLURP2P0DP57 97 aa10.68□□□□□ -0.7
COMMD3-212ENST00000479958 MX2P20592 715 aa10.68□□□□□ -0.7
COMMD3-212ENST00000479958 NOS2P35228 1153 aa10.68□□□□□ -0.7
COMMD3-212ENST00000479958 FOXK2Q01167 660 aa10.68□□□□□ -0.7
COMMD3-212ENST00000479958 NLRP8Q86W28 1048 aa10.68□□□□□ -0.7
COMMD3-212ENST00000479958 ZNF232Q9UNY5 417 aa10.68□□□□□ -0.7
COMMD3-212ENST00000479958 ADAMTS2O95450 1211 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 EPHA4P54764 986 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 GAS6Q14393 721 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 L3MBTL2Q969R5 705 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 GJA3Q9Y6H8 435 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 USP3Q9Y6I4 520 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 SERTM1A2A2V5 107 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 SFI1A8K8P3 1242 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 BICDL1Q6ZP65 573 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 ZNF295-AS1Q8N0V1 137 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 NEUROD4Q9HD90 331 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 PARP3Q9Y6F1 533 aa10.67□□□□□ -0.7
COMMD3-212ENST00000479958 FAM196BA6NMK8 535 aa10.66□□□□□ -0.7
COMMD3-212ENST00000479958 PSMA6P60900 246 aaKnown RBP10.66□□□□□ -0.7
COMMD3-212ENST00000479958 A0A1W2PNR3 127 aa10.65□□□□□ -0.7
COMMD3-212ENST00000479958 RFX1P22670 979 aa10.65□□□□□ -0.7
COMMD3-212ENST00000479958 PTK7Q13308 1070 aa10.65□□□□□ -0.7
COMMD3-212ENST00000479958 SVOPQ8N4V2 548 aa10.65□□□□□ -0.7
COMMD3-212ENST00000479958 TSEN2Q8NCE0 465 aaKnown RBP10.65□□□□□ -0.7
COMMD3-212ENST00000479958 GAS2L2Q8NHY3 880 aa10.65□□□□□ -0.7
COMMD3-212ENST00000479958 HINFPQ9BQA5 517 aa10.65□□□□□ -0.7
COMMD3-212ENST00000479958 ATXN7L1Q9ULK2 861 aaPredicted RBP10.65□□□□□ -0.7
COMMD3-212ENST00000479958 PCDHGC4Q9Y5F7 938 aa10.65□□□□□ -0.7
COMMD3-212ENST00000479958 ATP4AP20648 1035 aa10.64□□□□□ -0.71
COMMD3-212ENST00000479958 DPYDQ12882 1025 aa10.64□□□□□ -0.71
COMMD3-212ENST00000479958 TBCELQ5QJ74 424 aa10.64□□□□□ -0.71
COMMD3-212ENST00000479958 CFAP70Q5T0N1 1121 aa10.64□□□□□ -0.71
COMMD3-212ENST00000479958 ANKMY2Q8IV38 441 aa10.64□□□□□ -0.71
COMMD3-212ENST00000479958 ZCCHC2Q9C0B9 1178 aaKnown RBP10.64□□□□□ -0.71
COMMD3-212ENST00000479958 TSPAN10Q9H1Z9 355 aaPredicted RBP10.64□□□□□ -0.71
COMMD3-212ENST00000479958 IGF1RP08069 1367 aa10.64□□□□□ -0.71
COMMD3-212ENST00000479958 DKK1O94907 266 aa10.63□□□□□ -0.71
COMMD3-212ENST00000479958 MAP2K3P46734 347 aa10.63□□□□□ -0.71
COMMD3-212ENST00000479958 MAP3K10Q02779 954 aa10.63□□□□□ -0.71
COMMD3-212ENST00000479958 CRTC2Q53ET0 693 aaPredicted RBP10.63□□□□□ -0.71
COMMD3-212ENST00000479958 ZIC5Q96T25 663 aa10.63□□□□□ -0.71
COMMD3-212ENST00000479958 ENAMQ9NRM1 1142 aa10.63□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L15C9J2P7 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L13C9JLJ4 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L11C9JVI0 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L21D6R901 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L18D6R9N7 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L22D6RA61 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L17D6RBQ6 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L19D6RCP7 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L20D6RJB6 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 PPP1R12BO60237 982 aaPredicted RBP10.62□□□□□ -0.71
COMMD3-212ENST00000479958 THBS1P07996 1170 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 USP17L24Q0WX57 530 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 ZDHHC1Q8WTX9 485 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 ATAD2Q6PL18 1390 aa10.62□□□□□ -0.71
COMMD3-212ENST00000479958 ATXN7O15265 892 aaPredicted RBP10.61□□□□□ -0.71
COMMD3-212ENST00000479958 UBAP2LQ14157 1087 aaKnown RBP10.61□□□□□ -0.71
COMMD3-212ENST00000479958 ZNF385CQ66K41 422 aaPredicted RBP10.61□□□□□ -0.71
COMMD3-212ENST00000479958 CCDC97Q96F63 343 aaPredicted RBP10.61□□□□□ -0.71
COMMD3-212ENST00000479958 GPC6Q9Y625 555 aaPredicted RBP10.61□□□□□ -0.71
COMMD3-212ENST00000479958 TXLNAP40222 546 aa10.6□□□□□ -0.71
COMMD3-212ENST00000479958 C1orf53Q5VUE5 145 aa10.6□□□□□ -0.71
COMMD3-212ENST00000479958 FAM200AQ8TCP9 573 aa10.6□□□□□ -0.71
COMMD3-212ENST00000479958 BNIP3LO60238 219 aa10.59□□□□□ -0.71
COMMD3-212ENST00000479958 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
COMMD3-212ENST00000479958 SCG3Q8WXD2 468 aaKnown RBP10.59□□□□□ -0.71
COMMD3-212ENST00000479958 ABHD17AQ96GS6 310 aa10.59□□□□□ -0.71
COMMD3-212ENST00000479958 SERPINA10Q9UK55 444 aa10.59□□□□□ -0.71
COMMD3-212ENST00000479958 EML1O00423 815 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 BMP4P12644 408 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 FGFR3P22607 806 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 LYPD4Q6UWN0 246 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 STAG2Q8N3U4 1231 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 WHAMMQ8TF30 809 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 CHMP7Q8WUX9 453 aaPredicted RBP10.58□□□□□ -0.72
COMMD3-212ENST00000479958 ANKIB1Q9P2G1 1089 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 HCN4Q9Y3Q4 1203 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 CELA2BP08218 269 aaPredicted RBP10.58□□□□□ -0.72
COMMD3-212ENST00000479958 HIRAP54198 1017 aaPredicted RBP10.58□□□□□ -0.72
COMMD3-212ENST00000479958 C14orf37Q86TY3 774 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 RHPN1Q8TCX5 695 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 NDFIP2Q9NV92 336 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 ADAMTS8Q9UP79 889 aa10.58□□□□□ -0.72
COMMD3-212ENST00000479958 BCRP11274 1271 aa10.57□□□□□ -0.72
COMMD3-212ENST00000479958 SAMD5Q5TGI4 173 aa10.57□□□□□ -0.72
COMMD3-212ENST00000479958 KHNYNO15037 678 aaKnown RBP10.56□□□□□ -0.72
COMMD3-212ENST00000479958 MARSP56192 900 aaKnown RBP10.56□□□□□ -0.72
COMMD3-212ENST00000479958 KLRG1Q96E93 195 aa10.56□□□□□ -0.72
COMMD3-212ENST00000479958 OXCT2Q9BYC2 517 aaPredicted RBP10.56□□□□□ -0.72
COMMD3-212ENST00000479958 LRRC4BQ9NT99 713 aa10.56□□□□□ -0.72
COMMD3-212ENST00000479958 MAPTP10636 758 aaKnown RBP10.55□□□□□ -0.72
COMMD3-212ENST00000479958 TNP2Q05952 138 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms