RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 POLA2Q14181 598 aa23.38■■□□□ 1.33
TNFRSF8-204ENST00000479933 SKOR2Q2VWA4 1001 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF8-204ENST00000479933 MPRIPQ6WCQ1 1025 aa23.38■■□□□ 1.33
TNFRSF8-204ENST00000479933 DBF4Q9UBU7 674 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF8-204ENST00000479933 C1orf167Q5SNV9 1468 aa23.38■■□□□ 1.33
TNFRSF8-204ENST00000479933 BEND3Q5T5X7 828 aa23.37■■□□□ 1.33
TNFRSF8-204ENST00000479933 C19orf44Q9H6X5 657 aa23.37■■□□□ 1.33
TNFRSF8-204ENST00000479933 PXDNQ92626 1479 aa23.36■■□□□ 1.33
TNFRSF8-204ENST00000479933 LMOD2Q6P5Q4 547 aa23.36■■□□□ 1.33
TNFRSF8-204ENST00000479933 CLEC17AQ6ZS10 378 aa23.36■■□□□ 1.33
TNFRSF8-204ENST00000479933 HDAC5Q9UQL6 1122 aa23.36■■□□□ 1.33
TNFRSF8-204ENST00000479933 SIPA1L3O60292 1781 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF8-204ENST00000479933 ADAMTS7Q9UKP4 1686 aa23.36■■□□□ 1.33
TNFRSF8-204ENST00000479933 XPCQ01831 940 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF8-204ENST00000479933 HSP90AB4PQ58FF6 505 aa23.36■■□□□ 1.33
TNFRSF8-204ENST00000479933 ESYT1Q9BSJ8 1104 aa23.36■■□□□ 1.33
TNFRSF8-204ENST00000479933 CWC22Q9HCG8 908 aaKnown RBP23.36■■□□□ 1.33
TNFRSF8-204ENST00000479933 MCCP23508 829 aa23.35■■□□□ 1.33
TNFRSF8-204ENST00000479933 PPP1R42Q7Z4L9 355 aa23.35■■□□□ 1.33
TNFRSF8-204ENST00000479933 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
TNFRSF8-204ENST00000479933 PI4KAP2A4QPH2 592 aa23.35■■□□□ 1.33
TNFRSF8-204ENST00000479933 KCNQ3O43525 872 aa23.35■■□□□ 1.33
TNFRSF8-204ENST00000479933 PI4KAP1Q8N8J0 262 aa23.35■■□□□ 1.33
TNFRSF8-204ENST00000479933 HEG1Q9ULI3 1381 aa23.35■■□□□ 1.33
TNFRSF8-204ENST00000479933 EPB41L2O43491 1005 aaKnown RBP23.34■■□□□ 1.33
TNFRSF8-204ENST00000479933 NUCB2P80303 420 aa23.34■■□□□ 1.33
TNFRSF8-204ENST00000479933 TERF1P54274 439 aa23.33■■□□□ 1.33
TNFRSF8-204ENST00000479933 GRPEL1Q9HAV7 217 aa23.33■■□□□ 1.33
TNFRSF8-204ENST00000479933 FOXD4L1Q9NU39 408 aa23.33■■□□□ 1.33
TNFRSF8-204ENST00000479933 GOLGA6L22H0YM25 854 aa23.33■■□□□ 1.32
TNFRSF8-204ENST00000479933 SURF6O75683 361 aaKnown RBP23.33■■□□□ 1.32
TNFRSF8-204ENST00000479933 ALDH1L1O75891 902 aa23.33■■□□□ 1.32
TNFRSF8-204ENST00000479933 KIF1BPQ96EK5 621 aa23.33■■□□□ 1.32
TNFRSF8-204ENST00000479933 ADCY9O60503 1353 aa23.32■■□□□ 1.32
TNFRSF8-204ENST00000479933 TRIM6-TRIM34B2RNG4 842 aa23.32■■□□□ 1.32
TNFRSF8-204ENST00000479933 CHMLP26374 656 aa23.32■■□□□ 1.32
TNFRSF8-204ENST00000479933 PRDM4Q9UKN5 801 aa23.32■■□□□ 1.32
TNFRSF8-204ENST00000479933 ERBB4Q15303 1308 aa23.32■■□□□ 1.32
TNFRSF8-204ENST00000479933 GIGYF1O75420 1035 aaPredicted RBP23.32■■□□□ 1.32
TNFRSF8-204ENST00000479933 ANAPC15P60006 121 aa23.32■■□□□ 1.32
TNFRSF8-204ENST00000479933 RGPD5Q99666 1765 aa23.31■■□□□ 1.32
TNFRSF8-204ENST00000479933 SRGAP3O43295 1099 aa23.31■■□□□ 1.32
TNFRSF8-204ENST00000479933 MCM2P49736 904 aa23.31■■□□□ 1.32
TNFRSF8-204ENST00000479933 RHPN1Q8TCX5 695 aa23.3■■□□□ 1.32
TNFRSF8-204ENST00000479933 RILPL2Q969X0 211 aa23.3■■□□□ 1.32
TNFRSF8-204ENST00000479933 TSHZ3Q63HK5 1081 aa23.3■■□□□ 1.32
TNFRSF8-204ENST00000479933 HYPKQ9NX55 129 aa23.3■■□□□ 1.32
TNFRSF8-204ENST00000479933 AXIN2Q9Y2T1 843 aa23.3■■□□□ 1.32
TNFRSF8-204ENST00000479933 ERBB3P21860 1342 aa23.3■■□□□ 1.32
TNFRSF8-204ENST00000479933 ABCC6O95255 1503 aa23.3■■□□□ 1.32
TNFRSF8-204ENST00000479933 PLEKHG2Q9H7P9 1386 aa23.29■■□□□ 1.32
TNFRSF8-204ENST00000479933 DCCP43146 1447 aa23.29■■□□□ 1.32
TNFRSF8-204ENST00000479933 NBPF7P0C2Y1 421 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF8-204ENST00000479933 MTX1Q13505 466 aa23.29■■□□□ 1.32
TNFRSF8-204ENST00000479933 KSR2Q6VAB6 950 aa23.29■■□□□ 1.32
TNFRSF8-204ENST00000479933 MAP7D2Q96T17 732 aa23.29■■□□□ 1.32
TNFRSF8-204ENST00000479933 GZF1Q9H116 711 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF8-204ENST00000479933 AK9Q5TCS8 1911 aa23.29■■□□□ 1.32
TNFRSF8-204ENST00000479933 SSFA2P28290 1259 aa23.28■■□□□ 1.32
TNFRSF8-204ENST00000479933 IL17RAQ96F46 866 aa23.28■■□□□ 1.32
TNFRSF8-204ENST00000479933 IL1RAPL2Q9NP60 686 aa23.27■■□□□ 1.32
TNFRSF8-204ENST00000479933 ATF3P18847 181 aa23.27■■□□□ 1.32
TNFRSF8-204ENST00000479933 PLEKHG5O94827 1062 aa23.26■■□□□ 1.31
TNFRSF8-204ENST00000479933 DDX58O95786 925 aaKnown RBP23.26■■□□□ 1.31
TNFRSF8-204ENST00000479933 RAPGEF4Q8WZA2 1011 aa23.26■■□□□ 1.31
TNFRSF8-204ENST00000479933 SCN11AQ9UI33 1791 aa23.26■■□□□ 1.31
TNFRSF8-204ENST00000479933 MAP3K2Q9Y2U5 619 aa23.26■■□□□ 1.31
TNFRSF8-204ENST00000479933 USP42Q9H9J4 1324 aaKnown RBP23.24■■□□□ 1.31
TNFRSF8-204ENST00000479933 ANXA1P04083 346 aa23.24■■□□□ 1.31
TNFRSF8-204ENST00000479933 CYP2E1P05181 493 aaPredicted RBP23.24■■□□□ 1.31
TNFRSF8-204ENST00000479933 NUTM1Q86Y26 1132 aa23.24■■□□□ 1.31
TNFRSF8-204ENST00000479933 TRIM44Q96DX7 344 aaPredicted RBP23.24■■□□□ 1.31
TNFRSF8-204ENST00000479933 ANO2Q9NQ90 1003 aa23.24■■□□□ 1.31
TNFRSF8-204ENST00000479933 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.24■■□□□ 1.31
TNFRSF8-204ENST00000479933 C9orf78Q9NZ63 289 aaPredicted RBP23.24■■□□□ 1.31
TNFRSF8-204ENST00000479933 BAG4O95429 457 aaKnown RBP23.24■■□□□ 1.31
TNFRSF8-204ENST00000479933 DDX21Q9NR30 783 aaKnown RBP eCLIP23.24■■□□□ 1.31
TNFRSF8-204ENST00000479933 TTC41PQ6P2S7 1318 aa23.23■■□□□ 1.31
TNFRSF8-204ENST00000479933 NEK4P51957 841 aa23.23■■□□□ 1.31
TNFRSF8-204ENST00000479933 ERC1Q8IUD2 1116 aa23.23■■□□□ 1.31
TNFRSF8-204ENST00000479933 SPG7Q9UQ90 795 aa23.23■■□□□ 1.31
TNFRSF8-204ENST00000479933 PI4K2BQ8TCG2 481 aa23.23■■□□□ 1.31
TNFRSF8-204ENST00000479933 TATP17735 454 aaPredicted RBP23.22■■□□□ 1.31
TNFRSF8-204ENST00000479933 ZC3H6P61129 1189 aaKnown RBP23.22■■□□□ 1.31
TNFRSF8-204ENST00000479933 CNTROBQ8N137 903 aa23.22■■□□□ 1.31
TNFRSF8-204ENST00000479933 LINS1Q8NG48 757 aa23.22■■□□□ 1.31
TNFRSF8-204ENST00000479933 UNC5CLQ8IV45 518 aa23.21■■□□□ 1.31
TNFRSF8-204ENST00000479933 CRYBG1Q9Y4K1 1723 aa23.21■■□□□ 1.31
TNFRSF8-204ENST00000479933 COL18A1P39060 1754 aa23.21■■□□□ 1.31
TNFRSF8-204ENST00000479933 OS9Q13438 667 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF8-204ENST00000479933 PROSER3Q2NL68 480 aa23.2■■□□□ 1.3
TNFRSF8-204ENST00000479933 ARXQ96QS3 562 aa23.2■■□□□ 1.3
TNFRSF8-204ENST00000479933 SLC52A2Q9HAB3 445 aa23.2■■□□□ 1.3
TNFRSF8-204ENST00000479933 NLRP2Q9NX02 1062 aa23.2■■□□□ 1.3
TNFRSF8-204ENST00000479933 UTYO14607 1347 aa23.2■■□□□ 1.3
TNFRSF8-204ENST00000479933 NPHP3Q7Z494 1330 aa23.2■■□□□ 1.3
TNFRSF8-204ENST00000479933 TMEM94Q12767 1356 aa23.19■■□□□ 1.3
TNFRSF8-204ENST00000479933 GLRX3O76003 335 aaKnown RBP23.19■■□□□ 1.3
TNFRSF8-204ENST00000479933 KIAA1211Q6ZU35 1233 aa23.19■■□□□ 1.3
TNFRSF8-204ENST00000479933 CLASRPQ8N2M8 674 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms