RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
TRAPPC12-218ENST00000479897 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
TRAPPC12-218ENST00000479897 UBR3Q6ZT12 1888 aa16.14■□□□□ 0.17
TRAPPC12-218ENST00000479897 QSER1Q2KHR3 1735 aa16.14■□□□□ 0.17
TRAPPC12-218ENST00000479897 STARD3NLO95772 234 aa16.13■□□□□ 0.17
TRAPPC12-218ENST00000479897 CYP19A1P11511 503 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC12-218ENST00000479897 BAG6P46379 1132 aa16.13■□□□□ 0.17
TRAPPC12-218ENST00000479897 RARSP54136 660 aaKnown RBP16.13■□□□□ 0.17
TRAPPC12-218ENST00000479897 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
TRAPPC12-218ENST00000479897 TXNRD1Q16881 649 aa16.12■□□□□ 0.17
TRAPPC12-218ENST00000479897 CAMKK2Q96RR4 588 aa16.12■□□□□ 0.17
TRAPPC12-218ENST00000479897 N4BP2Q86UW6 1770 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC12-218ENST00000479897 TUBGCP6Q96RT7 1819 aa16.11■□□□□ 0.17
TRAPPC12-218ENST00000479897 PROM2Q8N271 834 aa16.11■□□□□ 0.17
TRAPPC12-218ENST00000479897 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
TRAPPC12-218ENST00000479897 SSH1Q8WYL5 1049 aa16.11■□□□□ 0.17
TRAPPC12-218ENST00000479897 LRRC4BQ9NT99 713 aa16.11■□□□□ 0.17
TRAPPC12-218ENST00000479897 DBF4Q9UBU7 674 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC12-218ENST00000479897 RCAN3Q9UKA8 241 aa16.11■□□□□ 0.17
TRAPPC12-218ENST00000479897 EIF2S2P20042 333 aaKnown RBP16.1■□□□□ 0.17
TRAPPC12-218ENST00000479897 PDIA6Q15084 440 aa16.1■□□□□ 0.17
TRAPPC12-218ENST00000479897 RC3H1Q5TC82 1133 aaKnown RBP16.1■□□□□ 0.17
TRAPPC12-218ENST00000479897 ILDR2Q71H61 639 aa16.1■□□□□ 0.17
TRAPPC12-218ENST00000479897 LRP10Q7Z4F1 713 aa16.1■□□□□ 0.17
TRAPPC12-218ENST00000479897 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRAPPC12-218ENST00000479897 STK31Q9BXU1 1019 aa16.1■□□□□ 0.17
TRAPPC12-218ENST00000479897 DDX21Q9NR30 783 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRAPPC12-218ENST00000479897 C4AP0C0L4 1744 aa16.1■□□□□ 0.17
TRAPPC12-218ENST00000479897 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
TRAPPC12-218ENST00000479897 CRKLP46109 303 aaKnown RBP16.09■□□□□ 0.17
TRAPPC12-218ENST00000479897 CCDC87Q9NVE4 849 aa16.09■□□□□ 0.17
TRAPPC12-218ENST00000479897 CHPF2Q9P2E5 772 aa16.09■□□□□ 0.17
TRAPPC12-218ENST00000479897 KIF16BQ96L93 1317 aa16.09■□□□□ 0.17
TRAPPC12-218ENST00000479897 SCN7AQ01118 1682 aa16.08■□□□□ 0.17
TRAPPC12-218ENST00000479897 NBPF26B4DH59 902 aa16.08■□□□□ 0.16
TRAPPC12-218ENST00000479897 NBPF14Q5TI25 921 aa16.08■□□□□ 0.16
TRAPPC12-218ENST00000479897 NBPF10Q6P3W6 841 aaKnown RBP16.08■□□□□ 0.16
TRAPPC12-218ENST00000479897 MRPL50Q8N5N7 158 aaKnown RBP16.08■□□□□ 0.16
TRAPPC12-218ENST00000479897 NBPF15Q8N660 670 aa16.08■□□□□ 0.16
TRAPPC12-218ENST00000479897 SMC4Q9NTJ3 1288 aa16.08■□□□□ 0.16
TRAPPC12-218ENST00000479897 HYPKQ9NX55 129 aa16.08■□□□□ 0.16
TRAPPC12-218ENST00000479897 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.16
TRAPPC12-218ENST00000479897 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.16
TRAPPC12-218ENST00000479897 IL6STP40189 918 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC12-218ENST00000479897 EN1Q05925 392 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC12-218ENST00000479897 INTS5Q6P9B9 1019 aaKnown RBP16.07■□□□□ 0.16
TRAPPC12-218ENST00000479897 RNF123Q5XPI4 1314 aa16.06■□□□□ 0.16
TRAPPC12-218ENST00000479897 A1BGP04217 495 aa16.06■□□□□ 0.16
TRAPPC12-218ENST00000479897 KCNQ4P56696 695 aa16.06■□□□□ 0.16
TRAPPC12-218ENST00000479897 EZH2Q15910 746 aaKnown RBP16.06■□□□□ 0.16
TRAPPC12-218ENST00000479897 PROSER3Q2NL68 480 aa16.06■□□□□ 0.16
TRAPPC12-218ENST00000479897 NECTIN2Q92692 538 aa16.06■□□□□ 0.16
TRAPPC12-218ENST00000479897 PXDNLA1KZ92 1463 aa16.05■□□□□ 0.16
TRAPPC12-218ENST00000479897 COL15A1P39059 1388 aa16.05■□□□□ 0.16
TRAPPC12-218ENST00000479897 PTPRCP08575 1304 aa16.05■□□□□ 0.16
TRAPPC12-218ENST00000479897 BCAR3O75815 825 aa16.05■□□□□ 0.16
TRAPPC12-218ENST00000479897 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
TRAPPC12-218ENST00000479897 DEFB132Q7Z7B7 95 aa16.05■□□□□ 0.16
TRAPPC12-218ENST00000479897 BCL2L13Q9BXK5 485 aa16.05■□□□□ 0.16
TRAPPC12-218ENST00000479897 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
TRAPPC12-218ENST00000479897 RPS6KA4O75676 772 aa16.04■□□□□ 0.16
TRAPPC12-218ENST00000479897 EIF5P55010 431 aaKnown RBP16.04■□□□□ 0.16
TRAPPC12-218ENST00000479897 FLIIQ13045 1269 aa16.04■□□□□ 0.16
TRAPPC12-218ENST00000479897 ARHGAP45Q92619 1136 aa16.04■□□□□ 0.16
TRAPPC12-218ENST00000479897 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
TRAPPC12-218ENST00000479897 TCERG1O14776 1098 aaKnown RBP16.03■□□□□ 0.16
TRAPPC12-218ENST00000479897 ANXA1P04083 346 aa16.03■□□□□ 0.16
TRAPPC12-218ENST00000479897 ADRA2BP18089 450 aa16.03■□□□□ 0.16
TRAPPC12-218ENST00000479897 AK7Q96M32 723 aa16.03■□□□□ 0.16
TRAPPC12-218ENST00000479897 RGL2O15211 777 aa16.02■□□□□ 0.16
TRAPPC12-218ENST00000479897 MYL6BP14649 208 aa16.02■□□□□ 0.16
TRAPPC12-218ENST00000479897 SSFA2P28290 1259 aa16.02■□□□□ 0.16
TRAPPC12-218ENST00000479897 G2E3Q7L622 706 aa16.02■□□□□ 0.16
TRAPPC12-218ENST00000479897 PHAXQ9H814 394 aaKnown RBP16.02■□□□□ 0.16
TRAPPC12-218ENST00000479897 NUP98P52948 1817 aa16.02■□□□□ 0.16
TRAPPC12-218ENST00000479897 GNPATO15228 680 aa16.01■□□□□ 0.15
TRAPPC12-218ENST00000479897 CANXP27824 592 aaKnown RBP16.01■□□□□ 0.15
TRAPPC12-218ENST00000479897 PIP4K2AP48426 406 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC12-218ENST00000479897 RRP1P56182 461 aaKnown RBP16.01■□□□□ 0.15
TRAPPC12-218ENST00000479897 ZNF827Q17R98 1081 aa16.01■□□□□ 0.15
TRAPPC12-218ENST00000479897 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC12-218ENST00000479897 RTCBQ9Y3I0 505 aaKnown RBP16.01■□□□□ 0.15
TRAPPC12-218ENST00000479897 A0A087WZG4 1122 aa16■□□□□ 0.15
TRAPPC12-218ENST00000479897 IPO8O15397 1037 aaKnown RBP16■□□□□ 0.15
TRAPPC12-218ENST00000479897 XAGE3Q8WTP9 111 aa16■□□□□ 0.15
TRAPPC12-218ENST00000479897 ADCY9O60503 1353 aa16■□□□□ 0.15
TRAPPC12-218ENST00000479897 DDX58O95786 925 aaKnown RBP15.99■□□□□ 0.15
TRAPPC12-218ENST00000479897 ZKSCAN2Q63HK3 967 aa15.99■□□□□ 0.15
TRAPPC12-218ENST00000479897 ATF7IPQ6VMQ6 1270 aa15.99■□□□□ 0.15
TRAPPC12-218ENST00000479897 COPS6Q7L5N1 327 aa15.99■□□□□ 0.15
TRAPPC12-218ENST00000479897 API5Q9BZZ5 524 aaKnown RBP15.99■□□□□ 0.15
TRAPPC12-218ENST00000479897 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC12-218ENST00000479897 NOB1Q9ULX3 412 aaKnown RBP15.99■□□□□ 0.15
TRAPPC12-218ENST00000479897 ATP10DQ9P241 1426 aa15.99■□□□□ 0.15
TRAPPC12-218ENST00000479897 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC12-218ENST00000479897 ABCC4O15439 1325 aa15.98■□□□□ 0.15
TRAPPC12-218ENST00000479897 TRIM27P14373 513 aa15.98■□□□□ 0.15
TRAPPC12-218ENST00000479897 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC12-218ENST00000479897 NPM2Q86SE8 214 aaKnown RBP15.98■□□□□ 0.15
TRAPPC12-218ENST00000479897 AMIGO3Q86WK7 504 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms