RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 TJP1Q07157 1748 aa18.12■□□□□ 0.49
RPP40-205ENST00000479782 TCERG1O14776 1098 aaKnown RBP18.11■□□□□ 0.49
RPP40-205ENST00000479782 PDE3AQ14432 1141 aa18.11■□□□□ 0.49
RPP40-205ENST00000479782 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
RPP40-205ENST00000479782 BCL11BQ9C0K0 894 aaPredicted RBP18.11■□□□□ 0.49
RPP40-205ENST00000479782 PTPRCP08575 1304 aa18.11■□□□□ 0.49
RPP40-205ENST00000479782 ERBB4Q15303 1308 aa18.11■□□□□ 0.49
RPP40-205ENST00000479782 ATF7IPQ6VMQ6 1270 aa18.1■□□□□ 0.49
RPP40-205ENST00000479782 NECTIN2Q92692 538 aa18.1■□□□□ 0.49
RPP40-205ENST00000479782 CHPF2Q9P2E5 772 aa18.1■□□□□ 0.49
RPP40-205ENST00000479782 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
RPP40-205ENST00000479782 DDX21Q9NR30 783 aaKnown RBP eCLIP18.09■□□□□ 0.49
RPP40-205ENST00000479782 LY75O60449 1722 aa18.09■□□□□ 0.49
RPP40-205ENST00000479782 TRIM27P14373 513 aa18.08■□□□□ 0.48
RPP40-205ENST00000479782 API5Q9BZZ5 524 aaKnown RBP18.08■□□□□ 0.48
RPP40-205ENST00000479782 HYPKQ9NX55 129 aa18.08■□□□□ 0.48
RPP40-205ENST00000479782 LOC102724428A0A0B4J2F2 783 aa18.07■□□□□ 0.48
RPP40-205ENST00000479782 STARD3NLO95772 234 aa18.07■□□□□ 0.48
RPP40-205ENST00000479782 SIK1P57059 783 aa18.07■□□□□ 0.48
RPP40-205ENST00000479782 FLIIQ13045 1269 aa18.07■□□□□ 0.48
RPP40-205ENST00000479782 FKBP8Q14318 412 aa18.07■□□□□ 0.48
RPP40-205ENST00000479782 ERICH6BQ5W0A0 696 aa18.07■□□□□ 0.48
RPP40-205ENST00000479782 DZIP1LQ8IYY4 767 aaKnown RBP18.07■□□□□ 0.48
RPP40-205ENST00000479782 PDIA6Q15084 440 aa18.06■□□□□ 0.48
RPP40-205ENST00000479782 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
RPP40-205ENST00000479782 FTSJ3Q8IY81 847 aaKnown RBP18.06■□□□□ 0.48
RPP40-205ENST00000479782 SLC4A9Q96Q91 983 aa18.06■□□□□ 0.48
RPP40-205ENST00000479782 COL5A3P25940 1745 aaPredicted RBP18.06■□□□□ 0.48
RPP40-205ENST00000479782 ATP6V1AP38606 617 aa18.05■□□□□ 0.48
RPP40-205ENST00000479782 IRX6P78412 446 aaPredicted RBP18.05■□□□□ 0.48
RPP40-205ENST00000479782 C20orf194Q5TEA3 1177 aa18.05■□□□□ 0.48
RPP40-205ENST00000479782 PTF1AQ7RTS3 328 aa18.05■□□□□ 0.48
RPP40-205ENST00000479782 GTF3C3Q9Y5Q9 886 aa18.05■□□□□ 0.48
RPP40-205ENST00000479782 RREB1Q92766 1687 aa18.04■□□□□ 0.48
RPP40-205ENST00000479782 G2E3Q7L622 706 aa18.04■□□□□ 0.48
RPP40-205ENST00000479782 ABCC4O15439 1325 aa18.03■□□□□ 0.48
RPP40-205ENST00000479782 TRIM37O94972 964 aa18.03■□□□□ 0.48
RPP40-205ENST00000479782 CYP19A1P11511 503 aaPredicted RBP18.03■□□□□ 0.48
RPP40-205ENST00000479782 FKBP5Q13451 457 aaPredicted RBP18.03■□□□□ 0.48
RPP40-205ENST00000479782 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
RPP40-205ENST00000479782 CLUAP1Q96AJ1 413 aa18.03■□□□□ 0.48
RPP40-205ENST00000479782 PHAXQ9H814 394 aaKnown RBP18.03■□□□□ 0.48
RPP40-205ENST00000479782 N4BP2Q86UW6 1770 aaPredicted RBP18.03■□□□□ 0.48
RPP40-205ENST00000479782 PXDNLA1KZ92 1463 aa18.02■□□□□ 0.48
RPP40-205ENST00000479782 PANK1Q8TE04 598 aa18.02■□□□□ 0.48
RPP40-205ENST00000479782 TNS1Q9HBL0 1735 aaKnown RBP18.02■□□□□ 0.48
RPP40-205ENST00000479782 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
RPP40-205ENST00000479782 ANXA1P04083 346 aa18.01■□□□□ 0.47
RPP40-205ENST00000479782 A1BGP04217 495 aa18.01■□□□□ 0.47
RPP40-205ENST00000479782 RLBP1P12271 317 aa18.01■□□□□ 0.47
RPP40-205ENST00000479782 MYL6BP14649 208 aa18.01■□□□□ 0.47
RPP40-205ENST00000479782 LRP10Q7Z4F1 713 aa18.01■□□□□ 0.47
RPP40-205ENST00000479782 TNNQ9UQP3 1299 aa18.01■□□□□ 0.47
RPP40-205ENST00000479782 RGPD3A6NKT7 1758 aaPredicted RBP18.01■□□□□ 0.47
RPP40-205ENST00000479782 RGPD4Q7Z3J3 1758 aa18.01■□□□□ 0.47
RPP40-205ENST00000479782 NBPF26B4DH59 902 aa18■□□□□ 0.47
RPP40-205ENST00000479782 HMGB2P26583 209 aaKnown RBP18■□□□□ 0.47
RPP40-205ENST00000479782 ITPK1Q13572 414 aa18■□□□□ 0.47
RPP40-205ENST00000479782 MVPQ14764 893 aaKnown RBP18■□□□□ 0.47
RPP40-205ENST00000479782 NBPF14Q5TI25 921 aa18■□□□□ 0.47
RPP40-205ENST00000479782 NBPF10Q6P3W6 841 aaKnown RBP18■□□□□ 0.47
RPP40-205ENST00000479782 NBPF15Q8N660 670 aa18■□□□□ 0.47
RPP40-205ENST00000479782 CRBNQ96SW2 442 aa18■□□□□ 0.47
RPP40-205ENST00000479782 TAF1LQ8IZX4 1826 aa18■□□□□ 0.47
RPP40-205ENST00000479782 AAMPQ13685 434 aa17.99■□□□□ 0.47
RPP40-205ENST00000479782 CCDC87Q9NVE4 849 aa17.99■□□□□ 0.47
RPP40-205ENST00000479782 CCNL1Q9UK58 526 aaPredicted RBP17.99■□□□□ 0.47
RPP40-205ENST00000479782 COG6Q9Y2V7 657 aa17.99■□□□□ 0.47
RPP40-205ENST00000479782 PLSCR1O15162 318 aa17.98■□□□□ 0.47
RPP40-205ENST00000479782 CRKLP46109 303 aaKnown RBP17.98■□□□□ 0.47
RPP40-205ENST00000479782 SLC27A3Q5K4L6 730 aa17.98■□□□□ 0.47
RPP40-205ENST00000479782 INTS3Q68E01 1043 aaKnown RBP17.98■□□□□ 0.47
RPP40-205ENST00000479782 TMEM57Q8N5G2 664 aa17.98■□□□□ 0.47
RPP40-205ENST00000479782 EXOC6Q8TAG9 804 aa17.98■□□□□ 0.47
RPP40-205ENST00000479782 XAGE3Q8WTP9 111 aa17.98■□□□□ 0.47
RPP40-205ENST00000479782 CHMP4BQ9H444 224 aaKnown RBP17.98■□□□□ 0.47
RPP40-205ENST00000479782 DDX19BQ9UMR2 479 aa17.98■□□□□ 0.47
RPP40-205ENST00000479782 ADCY9O60503 1353 aa17.97■□□□□ 0.47
RPP40-205ENST00000479782 IL6STP40189 918 aaPredicted RBP17.97■□□□□ 0.47
RPP40-205ENST00000479782 PIP4K2AP48426 406 aaPredicted RBP17.97■□□□□ 0.47
RPP40-205ENST00000479782 CCT4P50991 539 aaKnown RBP17.97■□□□□ 0.47
RPP40-205ENST00000479782 KSR2Q6VAB6 950 aa17.97■□□□□ 0.47
RPP40-205ENST00000479782 COPS6Q7L5N1 327 aa17.97■□□□□ 0.47
RPP40-205ENST00000479782 ITPRIPQ8IWB1 547 aa17.97■□□□□ 0.47
RPP40-205ENST00000479782 CNTNAP4Q9C0A0 1308 aa17.97■□□□□ 0.47
RPP40-205ENST00000479782 ARFGEF2Q9Y6D5 1785 aa17.96■□□□□ 0.47
RPP40-205ENST00000479782 NUP188Q5SRE5 1749 aa17.96■□□□□ 0.47
RPP40-205ENST00000479782 PI4KAP2A4QPH2 592 aa17.96■□□□□ 0.47
RPP40-205ENST00000479782 F6X3S4 739 aa17.96■□□□□ 0.47
RPP40-205ENST00000479782 AIMP1Q12904 312 aaKnown RBP17.96■□□□□ 0.47
RPP40-205ENST00000479782 RC3H1Q5TC82 1133 aaKnown RBP17.96■□□□□ 0.47
RPP40-205ENST00000479782 PI4KAP1Q8N8J0 262 aa17.96■□□□□ 0.47
RPP40-205ENST00000479782 LINC00116Q8NCU8 138 aa17.96■□□□□ 0.47
RPP40-205ENST00000479782 DNAAF4Q8WXU2 420 aa17.96■□□□□ 0.47
RPP40-205ENST00000479782 ZBTB1Q9Y2K1 713 aa17.96■□□□□ 0.47
RPP40-205ENST00000479782 ATP10DQ9P241 1426 aa17.96■□□□□ 0.47
RPP40-205ENST00000479782 C4BP0C0L5 1744 aa17.95■□□□□ 0.46
RPP40-205ENST00000479782 INTS5Q6P9B9 1019 aaKnown RBP17.95■□□□□ 0.46
RPP40-205ENST00000479782 ANKRD13DQ6ZTN6 518 aa17.95■□□□□ 0.46
RPP40-205ENST00000479782 MYH14Q7Z406 1995 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms